Protein ID | Ophio5|458 |
Gene name | |
Location | scaffold_110:36478..36949 |
Strand | + |
Gene length (bp) | 471 |
Transcript length (bp) | 471 |
Coding sequence length (bp) | 468 |
Protein length (aa) | 156 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0979 | 0.0691 | 0.9003 | 0.0742 | 0.0705 | 0.0096 | 0.2275 | 0.2225 | 0.1051 | 0.0015 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 20 | 0.957341 |
Orthofinder run ID | 4 |
Orthogroup | 6903 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|458 MRLLPSFFTVLAASILGAYAKTIIPMVCHSRGFSGKLWDWSVTINLTGEDVTWTSRGSWVTGIKSLEQYVCMVKG DQVRDEHDDKGTPARHELRLLCKQWEQDGWSDYKKPLKVIVGGGQPLQAKDEKGKHVGLRHFFQGDYFAHYCVVD DLVNVA |
Coding | >Ophio5|458 ATGAGACTCCTACCTTCGTTCTTCACTGTACTTGCGGCATCTATCCTGGGGGCATATGCCAAAACCATAATTCCG ATGGTATGCCATTCCAGGGGGTTTTCTGGTAAACTTTGGGACTGGAGCGTGACGATCAATCTCACTGGTGAAGAC GTGACATGGACTTCAAGGGGATCCTGGGTTACCGGCATCAAGAGCCTTGAGCAATATGTGTGTATGGTGAAGGGG GATCAAGTGCGCGACGAACACGATGATAAAGGGACCCCTGCACGCCACGAATTGCGACTGTTATGCAAACAGTGG GAACAGGATGGCTGGTCCGACTATAAGAAGCCACTCAAGGTCATTGTGGGTGGTGGGCAACCCCTACAGGCGAAG GACGAGAAGGGCAAGCATGTTGGGCTTCGTCATTTCTTCCAGGGAGACTACTTCGCGCATTACTGTGTTGTGGAC GATCTCGTCAACGTCGCT |
Transcript | >Ophio5|458 ATGAGACTCCTACCTTCGTTCTTCACTGTACTTGCGGCATCTATCCTGGGGGCATATGCCAAAACCATAATTCCG ATGGTATGCCATTCCAGGGGGTTTTCTGGTAAACTTTGGGACTGGAGCGTGACGATCAATCTCACTGGTGAAGAC GTGACATGGACTTCAAGGGGATCCTGGGTTACCGGCATCAAGAGCCTTGAGCAATATGTGTGTATGGTGAAGGGG GATCAAGTGCGCGACGAACACGATGATAAAGGGACCCCTGCACGCCACGAATTGCGACTGTTATGCAAACAGTGG GAACAGGATGGCTGGTCCGACTATAAGAAGCCACTCAAGGTCATTGTGGGTGGTGGGCAACCCCTACAGGCGAAG GACGAGAAGGGCAAGCATGTTGGGCTTCGTCATTTCTTCCAGGGAGACTACTTCGCGCATTACTGTGTTGTGGAC GATCTCGTCAACGTCGCTTAA |
Gene | >Ophio5|458 ATGAGACTCCTACCTTCGTTCTTCACTGTACTTGCGGCATCTATCCTGGGGGCATATGCCAAAACCATAATTCCG ATGGTATGCCATTCCAGGGGGTTTTCTGGTAAACTTTGGGACTGGAGCGTGACGATCAATCTCACTGGTGAAGAC GTGACATGGACTTCAAGGGGATCCTGGGTTACCGGCATCAAGAGCCTTGAGCAATATGTGTGTATGGTGAAGGGG GATCAAGTGCGCGACGAACACGATGATAAAGGGACCCCTGCACGCCACGAATTGCGACTGTTATGCAAACAGTGG GAACAGGATGGCTGGTCCGACTATAAGAAGCCACTCAAGGTCATTGTGGGTGGTGGGCAACCCCTACAGGCGAAG GACGAGAAGGGCAAGCATGTTGGGCTTCGTCATTTCTTCCAGGGAGACTACTTCGCGCATTACTGTGTTGTGGAC GATCTCGTCAACGTCGCTTAA |