Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|458
Gene name
Locationscaffold_110:36478..36949
Strand+
Gene length (bp)471
Transcript length (bp)471
Coding sequence length (bp)468
Protein length (aa) 156

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.0979 0.0691 0.9003 0.0742 0.0705 0.0096 0.2275 0.2225 0.1051 0.0015

SignalP

SignalP signal predicted Location Score
Yes 1 - 20 0.957341

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup6903
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|05876
Ophiocordyceps camponoti-floridani Ophcf2|06456
Ophiocordyceps camponoti-rufipedis Ophun1|2195
Ophiocordyceps kimflemingae Ophio5|458 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|458
MRLLPSFFTVLAASILGAYAKTIIPMVCHSRGFSGKLWDWSVTINLTGEDVTWTSRGSWVTGIKSLEQYVCMVKG
DQVRDEHDDKGTPARHELRLLCKQWEQDGWSDYKKPLKVIVGGGQPLQAKDEKGKHVGLRHFFQGDYFAHYCVVD
DLVNVA
Coding >Ophio5|458
ATGAGACTCCTACCTTCGTTCTTCACTGTACTTGCGGCATCTATCCTGGGGGCATATGCCAAAACCATAATTCCG
ATGGTATGCCATTCCAGGGGGTTTTCTGGTAAACTTTGGGACTGGAGCGTGACGATCAATCTCACTGGTGAAGAC
GTGACATGGACTTCAAGGGGATCCTGGGTTACCGGCATCAAGAGCCTTGAGCAATATGTGTGTATGGTGAAGGGG
GATCAAGTGCGCGACGAACACGATGATAAAGGGACCCCTGCACGCCACGAATTGCGACTGTTATGCAAACAGTGG
GAACAGGATGGCTGGTCCGACTATAAGAAGCCACTCAAGGTCATTGTGGGTGGTGGGCAACCCCTACAGGCGAAG
GACGAGAAGGGCAAGCATGTTGGGCTTCGTCATTTCTTCCAGGGAGACTACTTCGCGCATTACTGTGTTGTGGAC
GATCTCGTCAACGTCGCT
Transcript >Ophio5|458
ATGAGACTCCTACCTTCGTTCTTCACTGTACTTGCGGCATCTATCCTGGGGGCATATGCCAAAACCATAATTCCG
ATGGTATGCCATTCCAGGGGGTTTTCTGGTAAACTTTGGGACTGGAGCGTGACGATCAATCTCACTGGTGAAGAC
GTGACATGGACTTCAAGGGGATCCTGGGTTACCGGCATCAAGAGCCTTGAGCAATATGTGTGTATGGTGAAGGGG
GATCAAGTGCGCGACGAACACGATGATAAAGGGACCCCTGCACGCCACGAATTGCGACTGTTATGCAAACAGTGG
GAACAGGATGGCTGGTCCGACTATAAGAAGCCACTCAAGGTCATTGTGGGTGGTGGGCAACCCCTACAGGCGAAG
GACGAGAAGGGCAAGCATGTTGGGCTTCGTCATTTCTTCCAGGGAGACTACTTCGCGCATTACTGTGTTGTGGAC
GATCTCGTCAACGTCGCTTAA
Gene >Ophio5|458
ATGAGACTCCTACCTTCGTTCTTCACTGTACTTGCGGCATCTATCCTGGGGGCATATGCCAAAACCATAATTCCG
ATGGTATGCCATTCCAGGGGGTTTTCTGGTAAACTTTGGGACTGGAGCGTGACGATCAATCTCACTGGTGAAGAC
GTGACATGGACTTCAAGGGGATCCTGGGTTACCGGCATCAAGAGCCTTGAGCAATATGTGTGTATGGTGAAGGGG
GATCAAGTGCGCGACGAACACGATGATAAAGGGACCCCTGCACGCCACGAATTGCGACTGTTATGCAAACAGTGG
GAACAGGATGGCTGGTCCGACTATAAGAAGCCACTCAAGGTCATTGTGGGTGGTGGGCAACCCCTACAGGCGAAG
GACGAGAAGGGCAAGCATGTTGGGCTTCGTCATTTCTTCCAGGGAGACTACTTCGCGCATTACTGTGTTGTGGAC
GATCTCGTCAACGTCGCTTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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