Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4579
Gene name
Locationscaffold_365:7837..8665
Strand+
Gene length (bp)828
Transcript length (bp)828
Coding sequence length (bp)825
Protein length (aa) 275

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 46 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4579
MSPRIRRDVNGGLPPATIAGIVVGVVLIFALAALLFLVYYRREQAMDELDDEASTDAGHSTCKTRRECRGRGLGG
DSRLFGSSGDYQDYDMVNRQMYAPYRDTYTRNLDSAIPTHPAYIPSTRWPRSRPPPEPLLPNSQTVPVRSNRPDS
YAVQAYLAAAEESARLAGSTPVVHTRTERPRSRTLGLPLASLPRLSIPSKQAQARAEMKTPGGRHQGLPMQTVQP
AFRHHGRIRHGRPVAVAVAEWRPGSRQQARHDDGFIEVPLRSGKSTLFGY
Coding >Ophio5|4579
ATGAGTCCTCGAATCCGCCGGGATGTCAATGGTGGTTTGCCCCCCGCCACCATTGCCGGAATCGTCGTCGGAGTA
GTTCTCATCTTTGCTCTCGCCGCTCTCCTCTTCCTCGTCTACTATCGTCGTGAGCAGGCTATGGATGAGCTCGAC
GACGAAGCCTCCACCGATGCCGGCCACTCCACATGCAAAACCCGCAGAGAGTGTCGAGGGCGAGGCCTCGGCGGC
GATTCTCGGCTCTTCGGATCGTCCGGCGACTACCAAGATTACGACATGGTCAATCGACAAATGTACGCCCCGTAT
CGAGACACTTACACACGCAACCTCGACAGCGCCATACCCACTCACCCGGCTTACATCCCTTCCACGAGATGGCCC
AGGTCGAGGCCTCCTCCAGAGCCGCTGTTGCCTAACTCCCAGACCGTGCCGGTGCGGTCCAACAGGCCGGACTCG
TATGCCGTCCAGGCTTACCTCGCCGCCGCCGAAGAGTCGGCTCGGCTAGCCGGCTCTACTCCGGTCGTCCACACA
AGGACCGAGAGGCCGAGGAGCCGCACCTTGGGCCTTCCGCTCGCCTCCCTACCGAGACTATCCATTCCGAGTAAG
CAAGCACAGGCGAGGGCCGAGATGAAGACACCCGGCGGGCGGCATCAAGGCCTTCCCATGCAGACCGTACAACCG
GCCTTCCGACACCATGGACGAATCCGCCATGGCAGACCAGTCGCTGTGGCCGTCGCGGAGTGGCGGCCGGGATCC
AGACAGCAGGCCCGTCACGACGACGGCTTCATCGAGGTGCCTCTACGGAGCGGCAAAAGCACACTGTTCGGGTAC
Transcript >Ophio5|4579
ATGAGTCCTCGAATCCGCCGGGATGTCAATGGTGGTTTGCCCCCCGCCACCATTGCCGGAATCGTCGTCGGAGTA
GTTCTCATCTTTGCTCTCGCCGCTCTCCTCTTCCTCGTCTACTATCGTCGTGAGCAGGCTATGGATGAGCTCGAC
GACGAAGCCTCCACCGATGCCGGCCACTCCACATGCAAAACCCGCAGAGAGTGTCGAGGGCGAGGCCTCGGCGGC
GATTCTCGGCTCTTCGGATCGTCCGGCGACTACCAAGATTACGACATGGTCAATCGACAAATGTACGCCCCGTAT
CGAGACACTTACACACGCAACCTCGACAGCGCCATACCCACTCACCCGGCTTACATCCCTTCCACGAGATGGCCC
AGGTCGAGGCCTCCTCCAGAGCCGCTGTTGCCTAACTCCCAGACCGTGCCGGTGCGGTCCAACAGGCCGGACTCG
TATGCCGTCCAGGCTTACCTCGCCGCCGCCGAAGAGTCGGCTCGGCTAGCCGGCTCTACTCCGGTCGTCCACACA
AGGACCGAGAGGCCGAGGAGCCGCACCTTGGGCCTTCCGCTCGCCTCCCTACCGAGACTATCCATTCCGAGTAAG
CAAGCACAGGCGAGGGCCGAGATGAAGACACCCGGCGGGCGGCATCAAGGCCTTCCCATGCAGACCGTACAACCG
GCCTTCCGACACCATGGACGAATCCGCCATGGCAGACCAGTCGCTGTGGCCGTCGCGGAGTGGCGGCCGGGATCC
AGACAGCAGGCCCGTCACGACGACGGCTTCATCGAGGTGCCTCTACGGAGCGGCAAAAGCACACTGTTCGGGTAC
TGA
Gene >Ophio5|4579
ATGAGTCCTCGAATCCGCCGGGATGTCAATGGTGGTTTGCCCCCCGCCACCATTGCCGGAATCGTCGTCGGAGTA
GTTCTCATCTTTGCTCTCGCCGCTCTCCTCTTCCTCGTCTACTATCGTCGTGAGCAGGCTATGGATGAGCTCGAC
GACGAAGCCTCCACCGATGCCGGCCACTCCACATGCAAAACCCGCAGAGAGTGTCGAGGGCGAGGCCTCGGCGGC
GATTCTCGGCTCTTCGGATCGTCCGGCGACTACCAAGATTACGACATGGTCAATCGACAAATGTACGCCCCGTAT
CGAGACACTTACACACGCAACCTCGACAGCGCCATACCCACTCACCCGGCTTACATCCCTTCCACGAGATGGCCC
AGGTCGAGGCCTCCTCCAGAGCCGCTGTTGCCTAACTCCCAGACCGTGCCGGTGCGGTCCAACAGGCCGGACTCG
TATGCCGTCCAGGCTTACCTCGCCGCCGCCGAAGAGTCGGCTCGGCTAGCCGGCTCTACTCCGGTCGTCCACACA
AGGACCGAGAGGCCGAGGAGCCGCACCTTGGGCCTTCCGCTCGCCTCCCTACCGAGACTATCCATTCCGAGTAAG
CAAGCACAGGCGAGGGCCGAGATGAAGACACCCGGCGGGCGGCATCAAGGCCTTCCCATGCAGACCGTACAACCG
GCCTTCCGACACCATGGACGAATCCGCCATGGCAGACCAGTCGCTGTGGCCGTCGCGGAGTGGCGGCCGGGATCC
AGACAGCAGGCCCGTCACGACGACGGCTTCATCGAGGTGCCTCTACGGAGCGGCAAAAGCACACTGTTCGGGTAC
TGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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