Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4577
Gene name
Locationscaffold_365:2512..3970
Strand-
Gene length (bp)1458
Transcript length (bp)1239
Coding sequence length (bp)1236
Protein length (aa) 412

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 30 0.45

Transmembrane Domains

Domain # Start End Length
1 7 25 18
2 234 256 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4577
MLPRRRLSLTTSALLLLLLLLLLLLRADAVVVAPGSPCSTGCGNVLGSTSADDVVCETGAYVGAVGQLFQGCVEC
EMRSGYASGNQTDVQAMLYNLRYALSYCLFGYPGNQHLDSSPCITSKACGPFRDATIYGNLSSKYKSYEYCQTWP
SSTGGDVDYRACADCLQAAHNPYLANFVTVLEAGCEQQPSPGVAVGTVGDIFSHDYVNVTAPSPTATLNPAWFDQ
GRLGIGGKVGIAVGSLVLVLVLAGCAIVVNGKRRRRAYLRRLEARYGSKGWPSAGGEKAAAAAAATGGRGSRAWD
DTPSSQQPLRSWDDSPVTAARHMSPYSSQYNSPISTHHTLSALGIVHEPVIPEGKGKEREEAFEMQQVDDRMPQA
EAPVLGHPGYGRSVHGPPRQYAPGEADAKRTGGEDGP
Coding >Ophio5|4577
ATGCTCCCACGACGACGACTATCCCTCACGACATCAGCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTACTG
CGCGCCGATGCCGTAGTCGTCGCGCCCGGATCGCCTTGCTCGACGGGCTGCGGCAACGTGCTGGGTTCGACGTCG
GCGGATGACGTCGTCTGCGAGACGGGCGCCTATGTCGGTGCTGTCGGACAGCTCTTTCAGGGCTGTGTTGAGTGT
GAGATGCGTAGCGGGTATGCCAGTGGGAACCAGACCGATGTCCAGGCTATGCTGTACAACTTGCGATACGCCTTG
TCCTATTGCCTGTTTGGATATCCCGGGAATCAGCACCTTGACAGCTCGCCGTGCATCACCAGCAAAGCCTGTGGT
CCGTTTCGCGATGCTACCATCTACGGCAATCTGTCGTCCAAGTATAAGAGCTACGAGTATTGCCAGACGTGGCCG
TCGTCCACAGGCGGCGACGTCGACTACAGGGCCTGCGCCGACTGCTTGCAGGCTGCCCATAATCCATACCTCGCA
AACTTCGTCACCGTCCTCGAAGCTGGCTGTGAGCAACAGCCATCGCCCGGCGTCGCCGTCGGAACGGTCGGTGAC
ATCTTCTCGCACGATTACGTCAACGTCACGGCGCCGTCGCCCACGGCAACCCTCAATCCGGCCTGGTTCGATCAA
GGACGCCTCGGAATAGGCGGAAAAGTAGGCATCGCCGTCGGCAGCCTGGTCCTCGTTCTCGTCCTCGCCGGCTGT
GCCATCGTCGTCAATGGGAAGCGTAGAAGACGGGCCTACCTGCGCCGGCTGGAGGCCAGATACGGATCCAAGGGC
TGGCCCTCGGCCGGTGGTGAAAAGGCAGCAGCAGCAGCAGCAGCAACAGGCGGACGGGGCTCACGAGCTTGGGAC
GACACACCCAGCAGCCAGCAGCCGCTACGGTCATGGGACGACTCACCGGTGACGGCGGCGAGACACATGTCGCCC
TACTCGAGCCAGTACAACAGCCCCATCAGCACCCACCACACGCTGTCGGCTCTCGGCATCGTTCACGAGCCCGTC
ATTCCCGAGGGCAAGGGAAAGGAGCGGGAGGAGGCCTTTGAGATGCAGCAGGTCGATGACCGCATGCCGCAGGCT
GAGGCGCCGGTTCTCGGACACCCTGGCTACGGGAGGAGCGTCCATGGCCCTCCGAGGCAATACGCGCCGGGCGAG
GCTGATGCGAAGAGGACTGGTGGTGAGGACGGGCCG
Transcript >Ophio5|4577
ATGCTCCCACGACGACGACTATCCCTCACGACATCAGCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTACTG
CGCGCCGATGCCGTAGTCGTCGCGCCCGGATCGCCTTGCTCGACGGGCTGCGGCAACGTGCTGGGTTCGACGTCG
GCGGATGACGTCGTCTGCGAGACGGGCGCCTATGTCGGTGCTGTCGGACAGCTCTTTCAGGGCTGTGTTGAGTGT
GAGATGCGTAGCGGGTATGCCAGTGGGAACCAGACCGATGTCCAGGCTATGCTGTACAACTTGCGATACGCCTTG
TCCTATTGCCTGTTTGGATATCCCGGGAATCAGCACCTTGACAGCTCGCCGTGCATCACCAGCAAAGCCTGTGGT
CCGTTTCGCGATGCTACCATCTACGGCAATCTGTCGTCCAAGTATAAGAGCTACGAGTATTGCCAGACGTGGCCG
TCGTCCACAGGCGGCGACGTCGACTACAGGGCCTGCGCCGACTGCTTGCAGGCTGCCCATAATCCATACCTCGCA
AACTTCGTCACCGTCCTCGAAGCTGGCTGTGAGCAACAGCCATCGCCCGGCGTCGCCGTCGGAACGGTCGGTGAC
ATCTTCTCGCACGATTACGTCAACGTCACGGCGCCGTCGCCCACGGCAACCCTCAATCCGGCCTGGTTCGATCAA
GGACGCCTCGGAATAGGCGGAAAAGTAGGCATCGCCGTCGGCAGCCTGGTCCTCGTTCTCGTCCTCGCCGGCTGT
GCCATCGTCGTCAATGGGAAGCGTAGAAGACGGGCCTACCTGCGCCGGCTGGAGGCCAGATACGGATCCAAGGGC
TGGCCCTCGGCCGGTGGTGAAAAGGCAGCAGCAGCAGCAGCAGCAACAGGCGGACGGGGCTCACGAGCTTGGGAC
GACACACCCAGCAGCCAGCAGCCGCTACGGTCATGGGACGACTCACCGGTGACGGCGGCGAGACACATGTCGCCC
TACTCGAGCCAGTACAACAGCCCCATCAGCACCCACCACACGCTGTCGGCTCTCGGCATCGTTCACGAGCCCGTC
ATTCCCGAGGGCAAGGGAAAGGAGCGGGAGGAGGCCTTTGAGATGCAGCAGGTCGATGACCGCATGCCGCAGGCT
GAGGCGCCGGTTCTCGGACACCCTGGCTACGGGAGGAGCGTCCATGGCCCTCCGAGGCAATACGCGCCGGGCGAG
GCTGATGCGAAGAGGACTGGTGGTGAGGACGGGCCGTAA
Gene >Ophio5|4577
ATGCTCCCACGACGACGACTATCCCTCACGACATCAGCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTACTG
CGCGCCGATGCCGTAGTCGTCGCGCCCGGATCGCCTTGCTCGACGGGCTGCGGCAACGTGCTGGGTTCGACGTCG
GCGGATGACGTCGTCTGCGAGACGGGCGCCTATGTCGGTGCTGTCGGACAGCTCTTTCAGGGCTGTGTTGAGTGT
GAGATGCGTAGCGGGTATGCCAGTGGGAACCAGACCGATGTCCAGGCTATGCTGTGTGCGTCTCTTTTTTTTTTT
TACCCTTTTTTTTTTCTTTTTACCGTTTCCTTTTCATTCGTCCTCATCTTGGTTGACGTCTGCGAATAGACAACT
TGCGATACGCCTTGTCCTATTGCCTGTTTGGATATCCCGGGAATCAGCACCTTGACAGCTCGCCGTGCATCACCA
GGTGAGCCGGCTCTTCTCCTTTGCTTCTCCCCGCCCCCCCTGAGAACGATGAATTTGAACGAGCCGTTTTTTCTA
GCAAAGCCTGTGGTCCGTTTCGCGATGCTACCATCTACGGCAATCTGTCGTCCAAGTATAAGAGCTACGAGTATT
GCCAGACGTGGCCGTCGTCCACAGGCGGCGACGTCGACTACAGGGCCTGCGCCGACTGCTTGCAGGCTGCCCATA
ATCCATACCTCGCAAACTGTGAGTGGCCGATAGACCAAGTATACCGTGGCCTCAGTCCTGATTTGCCCTGCAGTC
GTCACCGTCCTCGAAGCTGGCTGTGAGCAACAGCCATCGCCCGGCGTCGCCGTCGGAACGGTCGGTGACATCTTC
TCGCACGATTACGTCAACGTCACGGCGCCGTCGCCCACGGCAACCCTCAATCCGGCCTGGTTCGATCAAGGACGC
CTCGGAATAGGCGGAAAAGTAGGCATCGCCGTCGGCAGCCTGGTCCTCGTTCTCGTCCTCGCCGGCTGTGCCATC
GTCGTCAATGGGAAGCGTAGAAGACGGGCCTACCTGCGCCGGCTGGAGGCCAGATACGGATCCAAGGGCTGGCCC
TCGGCCGGTGGTGAAAAGGCAGCAGCAGCAGCAGCAGCAACAGGCGGACGGGGCTCACGAGCTTGGGACGACACA
CCCAGCAGCCAGCAGCCGCTACGGTCATGGGACGACTCACCGGTGACGGCGGCGAGACACATGTCGCCCTACTCG
AGCCAGTACAACAGCCCCATCAGCACCCACCACACGCTGTCGGCTCTCGGCATCGTTCACGAGCCCGTCATTCCC
GAGGGCAAGGGAAAGGAGCGGGAGGAGGCCTTTGAGATGCAGCAGGTCGATGACCGCATGCCGCAGGCTGAGGCG
CCGGTTCTCGGACACCCTGGCTACGGGAGGAGCGTCCATGGCCCTCCGAGGCAATACGCGCCGGGCGAGGCTGAT
GCGAAGAGGACTGGTGGTGAGGACGGGCCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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