© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|4564 |
| Gene name | |
| Location | scaffold_363:8938..11108 |
| Strand | + |
| Gene length (bp) | 2170 |
| Transcript length (bp) | 1782 |
| Coding sequence length (bp) | 1779 |
| Protein length (aa) | 593 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 2.8E-17 | 36 | 150 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P06717|ELAP_ECOLX | Heat-labile enterotoxin A chain OS=Escherichia coli GN=eltA PE=1 SV=1 | 30 | 150 | 3.0E-11 |
| sp|P43530|ELAH_ECOH1 | Heat-labile enterotoxin A chain OS=Escherichia coli O78:H11 (strain H10407 / ETEC) GN=eltA PE=3 SV=1 | 36 | 150 | 7.0E-11 |
| sp|P01555|CHTA_VIBCH | Cholera enterotoxin subunit A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ctxA PE=1 SV=1 | 1 | 150 | 7.0E-11 |
| sp|A2PU44|CHELT_VIBCL | NAD(+)--arginine ADP-ribosyltransferase Chelt OS=Vibrio cholerae GN=A51_B1772 PE=1 SV=1 | 37 | 174 | 2.0E-10 |
| sp|P43528|E2BA_ECOLX | Heat-labile enterotoxin IIB, A chain OS=Escherichia coli PE=1 SV=2 | 37 | 150 | 2.0E-10 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P06717|ELAP_ECOLX | Heat-labile enterotoxin A chain OS=Escherichia coli GN=eltA PE=1 SV=1 | 30 | 150 | 3.0E-11 |
| sp|P43530|ELAH_ECOH1 | Heat-labile enterotoxin A chain OS=Escherichia coli O78:H11 (strain H10407 / ETEC) GN=eltA PE=3 SV=1 | 36 | 150 | 7.0E-11 |
| sp|P01555|CHTA_VIBCH | Cholera enterotoxin subunit A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ctxA PE=1 SV=1 | 1 | 150 | 7.0E-11 |
| sp|A2PU44|CHELT_VIBCL | NAD(+)--arginine ADP-ribosyltransferase Chelt OS=Vibrio cholerae GN=A51_B1772 PE=1 SV=1 | 37 | 174 | 2.0E-10 |
| sp|P43528|E2BA_ECOLX | Heat-labile enterotoxin IIB, A chain OS=Escherichia coli PE=1 SV=2 | 37 | 150 | 2.0E-10 |
| sp|P13810|E2AA_ECOLX | Heat-labile enterotoxin IIA, A chain OS=Escherichia coli PE=3 SV=1 | 37 | 150 | 6.0E-10 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0090729 | toxin activity | Yes |
| GO:0005615 | extracellular space | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 26 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| SC16a | Pure fungal culture | 3.13 | 0.84 | 5.42 |
| CcL | In ants, during behavior modification | 59.54 | 25.42 | 93.66 |
| CcD | In ants, recently dead | 59.13 | 32.12 | 86.14 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| SC16a | CcL | 0.000286 | yes |
| SC16a | CcD | 0.000286 | yes |
| CcL | CcD | 0.982050 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|4564 MLRLYWPQLAFLVTFLCSTLDQCLAGLPPGDRSLYVFRGDSRSPNQIEADGGFLPWPEIDYNDPRGYSLWDHVNA QSPHSAYISTSRSFGQSAVNFANAQGFGNYVYRIHITPNMIDVNNVFPNGPYTFQNEVSALGGIPWNAVQGWLQM PGEDSDSGVFDLDAPRFDNDLADNYTMRYETDFESRFINNPGYVTEGREGTTVRTLDDEDVATLRGGTPSERKVI IEAAERFMNRNGRMVGWTTNQRFPLWRPQTGSVQASPPHTDGHAANTSNRKMDCPSSSSSKSQTTDQVFELDEAD LMDIEEFLADQESKCEENSNAGNGPLRAEASAAMARAAERVEQSCQAHHEEDAWLQAALEHLREPSSNCHLFNKC GLGLGHFKRKRSADRGPSRIRRVYKVLVCWDGNSNESCQDGSRYRYDAERKGRNVEVVDRIELLSTSAVPVCNSI SRLKVEFHLSDRTWAGTYDALLLQFEGQTTHTPIPLTNAPRAGDSVFKDIDLKTIFGANKVPLREIKSVRLLDVP NPNEYWAKDQWRLKGLSLQGICDPSGKAIQMTKFTSLEKPLQHGRLERKRAKAGEEGEERRASQMSVL |
| Coding | >Ophio5|4564 ATGCTTCGACTATACTGGCCCCAACTTGCATTCCTCGTTACATTTCTCTGCTCTACCCTTGACCAATGTCTTGCG GGATTACCACCAGGCGACCGGTCACTTTACGTTTTCCGTGGAGACTCTCGAAGCCCAAATCAGATTGAAGCAGAT GGGGGCTTCCTCCCCTGGCCTGAAATAGACTACAATGACCCTAGAGGTTATAGTCTTTGGGATCACGTCAACGCC CAGTCGCCGCATTCAGCCTACATATCAACCTCGAGAAGCTTCGGGCAGTCAGCCGTCAACTTCGCCAATGCACAG GGCTTCGGAAATTACGTGTACCGCATCCATATAACTCCTAACATGATTGATGTGAACAATGTATTCCCCAATGGT CCCTATACCTTCCAGAATGAAGTCAGTGCGTTAGGAGGCATCCCATGGAATGCGGTCCAAGGATGGTTACAGATG CCCGGGGAAGACAGCGACTCCGGAGTATTCGATCTCGACGCTCCGCGGTTCGACAACGACTTAGCGGATAATTAC ACGATGAGATACGAAACTGATTTCGAGTCACGATTCATTAACAACCCGGGCTATGTTACCGAAGGGCGTGAGGGG ACTACGGTACGAACATTGGACGATGAAGATGTCGCTACTCTGAGGGGAGGAACACCAAGCGAGAGAAAAGTGATA ATCGAAGCCGCGGAACGATTCATGAACAGAAATGGTCGAATGGTTGGGTGGACGACGAATCAGCGTTTTCCTCTG TGGCGGCCACAAACTGGTTCCGTTCAAGCGTCGCCGCCACACACCGACGGCCATGCCGCAAACACCTCTAATAGA AAGATGGACTGCCCTTCTTCTTCCTCGAGTAAGAGTCAAACGACGGATCAAGTTTTTGAGTTGGATGAAGCCGAT CTCATGGACATCGAAGAATTTCTGGCCGATCAAGAGTCCAAATGCGAAGAGAATTCAAATGCAGGAAACGGCCCT CTCAGAGCCGAGGCAAGTGCTGCCATGGCCAGAGCCGCGGAGAGAGTGGAGCAGTCCTGTCAAGCACATCATGAG GAAGATGCATGGCTTCAGGCGGCCCTGGAGCATTTACGAGAGCCGAGCAGCAACTGCCACCTCTTCAACAAGTGT GGCTTGGGTCTCGGGCACTTCAAGCGGAAACGATCAGCAGACCGGGGCCCATCCAGGATAAGACGGGTCTACAAG GTGCTTGTTTGTTGGGACGGCAACTCCAACGAGAGCTGTCAAGATGGCAGCAGATATAGATACGACGCCGAACGC AAAGGCAGGAATGTGGAAGTCGTCGACAGAATCGAACTACTCAGTACATCTGCTGTTCCAGTCTGCAACTCCATT AGCAGGTTAAAAGTTGAGTTTCATTTATCAGACCGTACCTGGGCTGGGACATACGATGCTCTGCTGCTTCAATTC GAGGGTCAAACGACACATACCCCTATCCCTCTCACCAACGCACCCCGTGCCGGAGACTCCGTGTTCAAAGACATT GACCTGAAAACCATATTTGGGGCGAACAAGGTGCCATTGCGTGAGATTAAAAGCGTGCGTTTGCTGGATGTGCCC AATCCAAACGAGTACTGGGCCAAAGATCAGTGGCGGCTCAAAGGGTTATCACTCCAGGGGATATGCGATCCTTCG GGCAAAGCCATTCAGATGACAAAGTTTACCTCACTGGAGAAGCCTCTTCAACACGGGAGACTGGAGCGCAAAAGG GCAAAGGCGGGTGAAGAAGGGGAAGAACGGCGGGCGTCGCAGATGTCGGTCTTG |
| Transcript | >Ophio5|4564 ATGCTTCGACTATACTGGCCCCAACTTGCATTCCTCGTTACATTTCTCTGCTCTACCCTTGACCAATGTCTTGCG GGATTACCACCAGGCGACCGGTCACTTTACGTTTTCCGTGGAGACTCTCGAAGCCCAAATCAGATTGAAGCAGAT GGGGGCTTCCTCCCCTGGCCTGAAATAGACTACAATGACCCTAGAGGTTATAGTCTTTGGGATCACGTCAACGCC CAGTCGCCGCATTCAGCCTACATATCAACCTCGAGAAGCTTCGGGCAGTCAGCCGTCAACTTCGCCAATGCACAG GGCTTCGGAAATTACGTGTACCGCATCCATATAACTCCTAACATGATTGATGTGAACAATGTATTCCCCAATGGT CCCTATACCTTCCAGAATGAAGTCAGTGCGTTAGGAGGCATCCCATGGAATGCGGTCCAAGGATGGTTACAGATG CCCGGGGAAGACAGCGACTCCGGAGTATTCGATCTCGACGCTCCGCGGTTCGACAACGACTTAGCGGATAATTAC ACGATGAGATACGAAACTGATTTCGAGTCACGATTCATTAACAACCCGGGCTATGTTACCGAAGGGCGTGAGGGG ACTACGGTACGAACATTGGACGATGAAGATGTCGCTACTCTGAGGGGAGGAACACCAAGCGAGAGAAAAGTGATA ATCGAAGCCGCGGAACGATTCATGAACAGAAATGGTCGAATGGTTGGGTGGACGACGAATCAGCGTTTTCCTCTG TGGCGGCCACAAACTGGTTCCGTTCAAGCGTCGCCGCCACACACCGACGGCCATGCCGCAAACACCTCTAATAGA AAGATGGACTGCCCTTCTTCTTCCTCGAGTAAGAGTCAAACGACGGATCAAGTTTTTGAGTTGGATGAAGCCGAT CTCATGGACATCGAAGAATTTCTGGCCGATCAAGAGTCCAAATGCGAAGAGAATTCAAATGCAGGAAACGGCCCT CTCAGAGCCGAGGCAAGTGCTGCCATGGCCAGAGCCGCGGAGAGAGTGGAGCAGTCCTGTCAAGCACATCATGAG GAAGATGCATGGCTTCAGGCGGCCCTGGAGCATTTACGAGAGCCGAGCAGCAACTGCCACCTCTTCAACAAGTGT GGCTTGGGTCTCGGGCACTTCAAGCGGAAACGATCAGCAGACCGGGGCCCATCCAGGATAAGACGGGTCTACAAG GTGCTTGTTTGTTGGGACGGCAACTCCAACGAGAGCTGTCAAGATGGCAGCAGATATAGATACGACGCCGAACGC AAAGGCAGGAATGTGGAAGTCGTCGACAGAATCGAACTACTCAGTACATCTGCTGTTCCAGTCTGCAACTCCATT AGCAGGTTAAAAGTTGAGTTTCATTTATCAGACCGTACCTGGGCTGGGACATACGATGCTCTGCTGCTTCAATTC GAGGGTCAAACGACACATACCCCTATCCCTCTCACCAACGCACCCCGTGCCGGAGACTCCGTGTTCAAAGACATT GACCTGAAAACCATATTTGGGGCGAACAAGGTGCCATTGCGTGAGATTAAAAGCGTGCGTTTGCTGGATGTGCCC AATCCAAACGAGTACTGGGCCAAAGATCAGTGGCGGCTCAAAGGGTTATCACTCCAGGGGATATGCGATCCTTCG GGCAAAGCCATTCAGATGACAAAGTTTACCTCACTGGAGAAGCCTCTTCAACACGGGAGACTGGAGCGCAAAAGG GCAAAGGCGGGTGAAGAAGGGGAAGAACGGCGGGCGTCGCAGATGTCGGTCTTGTAG |
| Gene | >Ophio5|4564 ATGCTTCGACTATACTGGCCCCAACTTGCATTCCTCGTTACATTTCTCTGCTCTACCCTTGACCAATGTCTTGCG GGATTACCACCAGGCGACCGGTCACTTTACGTTTTCCGTGGAGACTCTCGAAGCCCAAATCAGATTGAAGCAGAT GGGGGCTTCCTCCCCTGGCCTGAAATAGACTACAATGACCCTAGAGGTTATAGTCTTTGGGATCACGTCAACGCC CAGTCGCCGCATTCAGCCTACATATCAACCTCGAGAAGCTTCGGGCAGTCAGCCGTCAACTTCGCCAATGCACAG GGCTTCGGAAATTACGTGTACCGCATCCATATAACTCCTAACATGATTGATGTGAACAATGTATTCCCCAATGGT CCCTATACCTTCCAGAATGAAGTCAGTGCGTTAGGAGGCATCCCATGGAATGCGGTCCAAGGATGGTTACAGATG CCCGGGGAAGACAGCGACTCCGGAGTATTCGATCTCGACGCTCCGCGGTTCGACAACGACTTAGCGGATAATTAC ACGATGAGATACGAAACTGATTTCGAGTCACGATTCATTAACAACCCGGGCTATGTTACCGAAGGGCGTGAGGGG ACTACGGTACGAACATTGGACGATGAAGATGTCGCTACTCTGAGGGGAGGAACACCAAGCGAGAGAAAAGTGATA ATCGAAGCCGCGGAACGATTCATGAACAGAAATGGTCGAATGGTTGGGTGGACGACGAATCAGCGTTTTCCTCTG TGGCGGCCACAAACTGGTTCCGTTCAAGCGTCGCCGCCACACACCGACGGCCATGGTAGGTACTGGCCATCACAA CATCTCACGGAATCCTTTCCACCCTTTTCCTCCAAGCAGGTCTATAGTGGTGTAACGTGTGACCGCAACGCTGAT GATGAAAACCAAAAGCCGCAAACACCTCTAATAGAAAGATGGACTGCCCTTCTTCTTCCTCGAGTAAGAGTCAAA CGACGGATCAAGTTTTTGAGTTGGATGAAGCCGATCTCATGGACATCGAAGAATTTCTGGCCGATCAAGAGTCCA AATGCGAAGAGAATTCAAATGCAGGAAACGGCCCTCTCAGAGCCGAGGCAAGTGCTGCCATGGCCAGAGCCGCGG AGAGAGTGGAGCAGTCCTGTCAAGCACATCATGAGGAAGATGCATGGCTTCAGGCGGCCCTGGAGCATTTACGAG AGCCGAGCAGCAACTGCCACCTCTTCAACAAGTGTGGCTTGGGTCTCGGGCACTTCAAGCGGAAACGATCAGCAG GTAAATCACCCGCACCACGCCCATTCATCATTCTGGCATAGCTGGTTACCGATGCTGAGTAGAGTCTTTCATTGC AGACCGGGGCCCATCCAGGATAAGACGGGTCTGTGAGAAATTAAAAAAAAGCCTAACGACCCAAAATAAAGACAA GGTGCTTGTTTGTTGGGACGGCAACTCCAACGAGAGCTGTCAAGATGGCAGCAGATATAGATACGACGCCGAACG CAAAGGCAGGAATGTGGAAGTCGTCGACAGAATCGAACTACTCAGTACATGTAAGGAGTTATCAAGCGCATCGAC GTCTGCCGCTAACTGTCGTATGTTTGCAGCTGCTGTTCCAGTCTGCAACTCCATTAGCAGGTTAAAAGTTGAGTT TCATTTATCAGACCGTACCTGGGCTGGGACATACGATGCTCTGCTGCTTCAATTCGAGGGTCAAACGACACATAC CCCTATCCCTCTCACCAACGCACCCCGTGCCGGAGACTCCGTGTTCAAAGACATTGACCTGAAAACCATATTTGG GGCGAACAAGGTGCCATTGCGTGAGATTAAAAGCGTGCGTTTGCTGGATGTGCCCAATCCAAACGAGTACTGGGC CAAAGATCAGTGGCGGCTCAAAGGTAGTCACTGCTGTTTTATTTTCTTGCTTGAGAGACGGGCTCTGACCTTTAT CCCCATTAGGGTTATCACTCCAGGGGATATGCGATCCTTCGGGCAAAGCCATTCAGATGACAAAGTTTACCTCAC TGGAGAAGCCTCTTCAACACGGGGTAGGTTATGATGCCGACTTAATATGGTCCGGAAAAATAAGCCCCAGAGACT GGAGCGCAAAAGGGCAAAGGCGGGTGAAGAAGGGGAAGAACGGCGGGCGTCGCAGATGTCGGTCTTGTAG |