© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|4529 |
| Gene name | |
| Location | scaffold_36:36829..38311 |
| Strand | - |
| Gene length (bp) | 1482 |
| Transcript length (bp) | 1482 |
| Coding sequence length (bp) | 1482 |
| Protein length (aa) | 494 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01545 | Cation_efflux | Cation efflux family | 7.1E-22 | 204 | 395 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6Z7K5|MTP3_ORYSJ | Metal tolerance protein 3 OS=Oryza sativa subsp. japonica GN=MTP3 PE=2 SV=1 | 179 | 485 | 7.0E-48 |
| sp|Q5NA18|MTP5_ORYSJ | Metal tolerance protein 5 OS=Oryza sativa subsp. japonica GN=MTP5 PE=2 SV=1 | 181 | 491 | 6.0E-46 |
| sp|Q10PP8|MTP4_ORYSJ | Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1 | 147 | 477 | 1.0E-45 |
| sp|Q9LDU0|MTP7_ORYSJ | Metal tolerance protein 7 OS=Oryza sativa subsp. japonica GN=MTP7 PE=2 SV=1 | 176 | 477 | 7.0E-45 |
| sp|Q9M2P2|MTPC3_ARATH | Putative metal tolerance protein C3 OS=Arabidopsis thaliana GN=MTPC3 PE=3 SV=2 | 207 | 477 | 7.0E-41 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6Z7K5|MTP3_ORYSJ | Metal tolerance protein 3 OS=Oryza sativa subsp. japonica GN=MTP3 PE=2 SV=1 | 179 | 485 | 7.0E-48 |
| sp|Q5NA18|MTP5_ORYSJ | Metal tolerance protein 5 OS=Oryza sativa subsp. japonica GN=MTP5 PE=2 SV=1 | 181 | 491 | 6.0E-46 |
| sp|Q10PP8|MTP4_ORYSJ | Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1 | 147 | 477 | 1.0E-45 |
| sp|Q9LDU0|MTP7_ORYSJ | Metal tolerance protein 7 OS=Oryza sativa subsp. japonica GN=MTP7 PE=2 SV=1 | 176 | 477 | 7.0E-45 |
| sp|Q9M2P2|MTPC3_ARATH | Putative metal tolerance protein C3 OS=Arabidopsis thaliana GN=MTPC3 PE=3 SV=2 | 207 | 477 | 7.0E-41 |
| sp|Q9SAJ7|MTP9_ARATH | Metal tolerance protein 9 OS=Arabidopsis thaliana GN=MTP9 PE=2 SV=2 | 183 | 477 | 6.0E-40 |
| sp|Q0WU02|MTP10_ARATH | Metal tolerance protein 10 OS=Arabidopsis thaliana GN=MTP10 PE=2 SV=1 | 175 | 477 | 8.0E-40 |
| sp|O80632|MTP11_ARATH | Metal tolerance protein 11 OS=Arabidopsis thaliana GN=MTP11 PE=2 SV=1 | 178 | 486 | 3.0E-37 |
| sp|Q0DHJ5|MTP6_ORYSJ | Metal tolerance protein 6 OS=Oryza sativa subsp. japonica GN=MTP6 PE=2 SV=2 | 181 | 486 | 1.0E-30 |
| sp|A8GLB1|FIEF_SERP5 | Cation-efflux pump FieF OS=Serratia proteamaculans (strain 568) GN=fieF PE=3 SV=1 | 215 | 484 | 6.0E-06 |
| sp|A7MQ82|FIEF_CROS8 | Cation-efflux pump FieF OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=fieF PE=3 SV=1 | 215 | 459 | 9.0E-06 |
| sp|A8AL14|FIEF_CITK8 | Cation-efflux pump FieF OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fieF PE=3 SV=1 | 200 | 459 | 9.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0008324 | cation transmembrane transporter activity | Yes |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0006810 | transport | No |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0051234 | establishment of localization | No |
| GO:0009987 | cellular process | No |
| GO:0006811 | ion transport | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Peroxisome | Signal peptide|Transmembrane domain | 0.1526 | 0.1531 | 0.0805 | 0.1175 | 0.1364 | 0.0985 | 0.5582 | 0.5143 | 0.4512 | 0.562 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 198 | 220 | 22 |
| 2 | 235 | 252 | 17 |
| 3 | 272 | 289 | 17 |
| 4 | 304 | 326 | 22 |
| 5 | 347 | 369 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 4904 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|4529 MVGKRSLRKDSSQALGHSSTRRRHRHHVDDMEDGMSACRRLLLRRRRRRHHQHHPSSLPGRFRDEDDDDDDEWEE EDDRMTRANRRRDQLTQALLHGIDGDELERFRVPESQLKTMGNDKKAIREFYRAQNSCLDDWREVDAVVVALADD VLDSMDPDPDGDGDQERCGALQRVQGNLAELLPDEERNRRAVAARRAAWAINFNVVANVLLLAGKAVAAVTTGSL SLVASLVDSALDLLCTLIVWSTNRLVLWRLSALRRRFPVGRRRLEPVGILVFSIIMIISFLQILRESVSRLMPPH RQPEALGVVAVVTMVATVVIKGAIGLACRPVRAPKVQALVQDCKTDVVFNSLSLLFPLVGHRAGIWWLDPLGAGL LSLFIVYDWGCTSVDNVVRLSGEAVADDTLRKLTYLAWRFSPVVDGFKSIVAYHAGDGVWVEFDVLLGEDTPLGR SHDIAETLQYCAEALPYVDRAFVTTDYAAVGPTGHALDTERNH* |
| Coding | >Ophio5|4529 ATGGTCGGAAAGCGGTCTCTGCGAAAAGACAGCAGCCAGGCCTTAGGCCACAGCTCAACACGACGCCGTCACCGT CACCACGTCGACGACATGGAAGATGGCATGTCGGCATGTCGTCGTCTTCTTCTTCGTCGTCGTCGTCGTCGTCAT CATCAACATCATCCTTCTTCTCTTCCCGGCCGATTCCGAGACGAAGATGATGACGACGACGACGAGTGGGAGGAG GAGGATGATCGAATGACGCGGGCGAATCGACGTCGTGATCAACTGACGCAGGCTCTCCTGCACGGCATCGACGGC GACGAACTCGAACGTTTTCGCGTACCGGAATCGCAGCTCAAGACTATGGGTAATGATAAAAAAGCGATACGGGAA TTTTATCGGGCGCAAAATTCCTGTCTCGATGATTGGCGTGAGGTTGACGCCGTCGTAGTCGCCTTGGCAGATGAC GTGCTCGATTCCATGGATCCAGACCCGGATGGGGACGGCGATCAGGAACGCTGCGGCGCCTTGCAACGCGTTCAG GGTAATCTGGCCGAGTTGTTACCGGACGAGGAGAGGAATCGTCGGGCGGTGGCGGCTCGGCGGGCGGCCTGGGCC ATCAACTTCAACGTCGTCGCCAACGTATTGCTTCTGGCGGGAAAGGCCGTCGCCGCCGTCACCACCGGCTCCTTG TCCTTGGTGGCTTCGCTCGTCGACTCGGCTCTCGACTTACTCTGTACCCTCATCGTCTGGTCCACCAATCGCCTC GTGCTGTGGCGATTGAGTGCCCTGCGACGGAGGTTTCCTGTTGGCCGCCGGAGGCTGGAACCGGTCGGGATACTC GTCTTCTCCATCATCATGATCATCTCCTTCTTACAGATCTTACGCGAGTCCGTCTCGCGTCTGATGCCTCCGCAT CGCCAGCCGGAAGCCTTGGGCGTCGTCGCCGTCGTCACCATGGTGGCCACCGTTGTCATCAAGGGGGCCATCGGC CTTGCCTGTCGCCCTGTGCGCGCCCCCAAGGTCCAGGCTCTGGTGCAGGATTGCAAGACGGATGTCGTCTTCAAC TCCCTGTCCCTCTTGTTCCCCCTCGTCGGTCATCGTGCCGGTATATGGTGGTTGGATCCGCTCGGGGCCGGCCTG CTTTCGCTCTTCATCGTCTACGACTGGGGCTGCACCTCGGTCGACAACGTCGTCCGCCTTTCCGGCGAGGCTGTC GCCGACGACACGCTTCGTAAACTCACCTACCTGGCCTGGCGCTTCTCGCCCGTCGTCGACGGCTTCAAGTCCATC GTCGCCTACCACGCCGGCGACGGTGTCTGGGTCGAGTTCGACGTCCTACTCGGCGAGGACACGCCTCTCGGTCGC TCTCATGACATTGCCGAGACGCTGCAGTACTGCGCCGAGGCGCTGCCCTACGTCGACCGCGCCTTTGTCACCACT GACTATGCCGCCGTCGGTCCCACGGGCCATGCACTCGATACCGAGCGCAATCACTGA |
| Transcript | >Ophio5|4529 ATGGTCGGAAAGCGGTCTCTGCGAAAAGACAGCAGCCAGGCCTTAGGCCACAGCTCAACACGACGCCGTCACCGT CACCACGTCGACGACATGGAAGATGGCATGTCGGCATGTCGTCGTCTTCTTCTTCGTCGTCGTCGTCGTCGTCAT CATCAACATCATCCTTCTTCTCTTCCCGGCCGATTCCGAGACGAAGATGATGACGACGACGACGAGTGGGAGGAG GAGGATGATCGAATGACGCGGGCGAATCGACGTCGTGATCAACTGACGCAGGCTCTCCTGCACGGCATCGACGGC GACGAACTCGAACGTTTTCGCGTACCGGAATCGCAGCTCAAGACTATGGGTAATGATAAAAAAGCGATACGGGAA TTTTATCGGGCGCAAAATTCCTGTCTCGATGATTGGCGTGAGGTTGACGCCGTCGTAGTCGCCTTGGCAGATGAC GTGCTCGATTCCATGGATCCAGACCCGGATGGGGACGGCGATCAGGAACGCTGCGGCGCCTTGCAACGCGTTCAG GGTAATCTGGCCGAGTTGTTACCGGACGAGGAGAGGAATCGTCGGGCGGTGGCGGCTCGGCGGGCGGCCTGGGCC ATCAACTTCAACGTCGTCGCCAACGTATTGCTTCTGGCGGGAAAGGCCGTCGCCGCCGTCACCACCGGCTCCTTG TCCTTGGTGGCTTCGCTCGTCGACTCGGCTCTCGACTTACTCTGTACCCTCATCGTCTGGTCCACCAATCGCCTC GTGCTGTGGCGATTGAGTGCCCTGCGACGGAGGTTTCCTGTTGGCCGCCGGAGGCTGGAACCGGTCGGGATACTC GTCTTCTCCATCATCATGATCATCTCCTTCTTACAGATCTTACGCGAGTCCGTCTCGCGTCTGATGCCTCCGCAT CGCCAGCCGGAAGCCTTGGGCGTCGTCGCCGTCGTCACCATGGTGGCCACCGTTGTCATCAAGGGGGCCATCGGC CTTGCCTGTCGCCCTGTGCGCGCCCCCAAGGTCCAGGCTCTGGTGCAGGATTGCAAGACGGATGTCGTCTTCAAC TCCCTGTCCCTCTTGTTCCCCCTCGTCGGTCATCGTGCCGGTATATGGTGGTTGGATCCGCTCGGGGCCGGCCTG CTTTCGCTCTTCATCGTCTACGACTGGGGCTGCACCTCGGTCGACAACGTCGTCCGCCTTTCCGGCGAGGCTGTC GCCGACGACACGCTTCGTAAACTCACCTACCTGGCCTGGCGCTTCTCGCCCGTCGTCGACGGCTTCAAGTCCATC GTCGCCTACCACGCCGGCGACGGTGTCTGGGTCGAGTTCGACGTCCTACTCGGCGAGGACACGCCTCTCGGTCGC TCTCATGACATTGCCGAGACGCTGCAGTACTGCGCCGAGGCGCTGCCCTACGTCGACCGCGCCTTTGTCACCACT GACTATGCCGCCGTCGGTCCCACGGGCCATGCACTCGATACCGAGCGCAATCACTGA |
| Gene | >Ophio5|4529 ATGGTCGGAAAGCGGTCTCTGCGAAAAGACAGCAGCCAGGCCTTAGGCCACAGCTCAACACGACGCCGTCACCGT CACCACGTCGACGACATGGAAGATGGCATGTCGGCATGTCGTCGTCTTCTTCTTCGTCGTCGTCGTCGTCGTCAT CATCAACATCATCCTTCTTCTCTTCCCGGCCGATTCCGAGACGAAGATGATGACGACGACGACGAGTGGGAGGAG GAGGATGATCGAATGACGCGGGCGAATCGACGTCGTGATCAACTGACGCAGGCTCTCCTGCACGGCATCGACGGC GACGAACTCGAACGTTTTCGCGTACCGGAATCGCAGCTCAAGACTATGGGTAATGATAAAAAAGCGATACGGGAA TTTTATCGGGCGCAAAATTCCTGTCTCGATGATTGGCGTGAGGTTGACGCCGTCGTAGTCGCCTTGGCAGATGAC GTGCTCGATTCCATGGATCCAGACCCGGATGGGGACGGCGATCAGGAACGCTGCGGCGCCTTGCAACGCGTTCAG GGTAATCTGGCCGAGTTGTTACCGGACGAGGAGAGGAATCGTCGGGCGGTGGCGGCTCGGCGGGCGGCCTGGGCC ATCAACTTCAACGTCGTCGCCAACGTATTGCTTCTGGCGGGAAAGGCCGTCGCCGCCGTCACCACCGGCTCCTTG TCCTTGGTGGCTTCGCTCGTCGACTCGGCTCTCGACTTACTCTGTACCCTCATCGTCTGGTCCACCAATCGCCTC GTGCTGTGGCGATTGAGTGCCCTGCGACGGAGGTTTCCTGTTGGCCGCCGGAGGCTGGAACCGGTCGGGATACTC GTCTTCTCCATCATCATGATCATCTCCTTCTTACAGATCTTACGCGAGTCCGTCTCGCGTCTGATGCCTCCGCAT CGCCAGCCGGAAGCCTTGGGCGTCGTCGCCGTCGTCACCATGGTGGCCACCGTTGTCATCAAGGGGGCCATCGGC CTTGCCTGTCGCCCTGTGCGCGCCCCCAAGGTCCAGGCTCTGGTGCAGGATTGCAAGACGGATGTCGTCTTCAAC TCCCTGTCCCTCTTGTTCCCCCTCGTCGGTCATCGTGCCGGTATATGGTGGTTGGATCCGCTCGGGGCCGGCCTG CTTTCGCTCTTCATCGTCTACGACTGGGGCTGCACCTCGGTCGACAACGTCGTCCGCCTTTCCGGCGAGGCTGTC GCCGACGACACGCTTCGTAAACTCACCTACCTGGCCTGGCGCTTCTCGCCCGTCGTCGACGGCTTCAAGTCCATC GTCGCCTACCACGCCGGCGACGGTGTCTGGGTCGAGTTCGACGTCCTACTCGGCGAGGACACGCCTCTCGGTCGC TCTCATGACATTGCCGAGACGCTGCAGTACTGCGCCGAGGCGCTGCCCTACGTCGACCGCGCCTTTGTCACCACT GACTATGCCGCCGTCGGTCCCACGGGCCATGCACTCGATACCGAGCGCAATCACTGA |