Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4523
Gene name
Locationscaffold_36:19895..21635
Strand+
Gene length (bp)1740
Transcript length (bp)1395
Coding sequence length (bp)1392
Protein length (aa) 464

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

Domain # Start End Length
1 104 126 22
2 139 161 22
3 181 203 22
4 224 246 22
5 266 288 22
6 300 322 22
7 337 356 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4523
MLVSTNGTPRRQLADAERPGSRGSDDRRRSLEAVLDGSQTAERPKGAPEPRHVSAAWLLQGKPTTMENFPSLPPA
RQQAILNGPGLAPPPGVVPNFVHPPNKTSMGVTIIAICLVLGTLTGLIRLYSRICVKKMHAEDVLGFAAYVSFVA
SGWSLLAFGHYGGFFVHQWNVQAKTMITISYVLYFFPIFYCATMLFAKTAILLEWTRIFVPVIRNSFYWISRVTT
IINVCLYLSVIVATSLYCVPVEKVWHKWVPGHCLNRKAVDTCVAVFNLGIDLLILALPQRIIWSLRIDTSKKIGV
SIVFSVGLLACACAIARTYLVIQLDFTGDVTYKLCETFMFAYSEMACVLMVFYVPASARAFKQNSLLSRMVSSLR
SWTRLPPSKKNRSAEDVGGQFPPTIGSKPINRVLHSADEETQALSLGEMRPAERFIVKTMEFEQREDAASKASTE
PELPNHRQHPWAKP
Coding >Ophio5|4523
ATGCTCGTCTCCACCAATGGCACGCCTCGCAGGCAGCTGGCCGATGCGGAACGGCCAGGTTCAAGGGGCTCTGAC
GACCGTCGACGCTCTCTCGAAGCAGTTCTGGACGGCTCCCAAACAGCAGAGAGGCCAAAAGGCGCCCCAGAGCCT
CGTCATGTCTCCGCCGCGTGGCTTCTCCAAGGCAAGCCAACGACAATGGAAAACTTCCCCAGCCTACCGCCCGCC
CGGCAACAAGCCATCCTCAACGGCCCCGGGCTGGCGCCGCCCCCGGGCGTTGTGCCCAACTTCGTCCACCCGCCG
AACAAGACATCCATGGGCGTCACCATCATTGCCATCTGCCTGGTCCTCGGCACACTGACGGGCCTCATCCGCTTG
TACTCGCGCATTTGCGTCAAAAAGATGCACGCCGAGGACGTCCTCGGCTTCGCGGCCTATGTTTCTTTCGTGGCC
TCGGGCTGGAGTCTGCTGGCCTTTGGACACTACGGCGGCTTCTTCGTGCATCAGTGGAACGTCCAGGCCAAGACG
ATGATAACCATTTCTTACGTCTTGTACTTCTTTCCCATCTTCTACTGCGCGACAATGCTCTTCGCCAAGACGGCC
ATCTTGCTCGAGTGGACGCGCATCTTTGTGCCCGTCATCCGGAACTCGTTCTACTGGATAAGCCGTGTGACTACC
ATCATCAATGTCTGCCTCTACTTGTCGGTCATCGTCGCCACCTCATTGTACTGTGTGCCGGTAGAAAAAGTCTGG
CACAAGTGGGTTCCGGGTCATTGCCTTAATCGCAAGGCTGTCGACACATGCGTCGCCGTCTTCAACCTTGGCATT
GATCTCCTGATATTGGCCCTGCCACAAAGGATCATCTGGTCCCTCAGGATCGACACCTCCAAAAAAATCGGCGTC
TCGATCGTCTTCTCCGTCGGATTGCTGGCTTGTGCCTGCGCCATCGCTCGAACGTACCTGGTGATCCAGCTGGAT
TTTACGGGCGACGTGACGTATAAGCTCTGCGAGACGTTCATGTTTGCCTACTCGGAAATGGCGTGTGTGCTCATG
GTCTTCTACGTGCCGGCGTCGGCGCGCGCCTTTAAGCAGAATAGCCTGCTGTCGAGGATGGTGTCGTCGCTGCGT
TCGTGGACGCGGCTGCCACCGTCGAAGAAGAACAGATCGGCCGAGGACGTCGGAGGGCAGTTCCCGCCGACGATC
GGCAGCAAGCCGATCAACCGCGTCCTTCACTCGGCCGACGAGGAGACGCAGGCGCTGAGCCTTGGCGAGATGAGG
CCGGCGGAGCGCTTCATCGTAAAAACTATGGAGTTTGAGCAGCGCGAAGACGCGGCATCCAAAGCATCGACAGAG
CCTGAGCTACCGAACCATAGACAACATCCTTGGGCGAAGCCG
Transcript >Ophio5|4523
ATGCTCGTCTCCACCAATGGCACGCCTCGCAGGCAGCTGGCCGATGCGGAACGGCCAGGTTCAAGGGGCTCTGAC
GACCGTCGACGCTCTCTCGAAGCAGTTCTGGACGGCTCCCAAACAGCAGAGAGGCCAAAAGGCGCCCCAGAGCCT
CGTCATGTCTCCGCCGCGTGGCTTCTCCAAGGCAAGCCAACGACAATGGAAAACTTCCCCAGCCTACCGCCCGCC
CGGCAACAAGCCATCCTCAACGGCCCCGGGCTGGCGCCGCCCCCGGGCGTTGTGCCCAACTTCGTCCACCCGCCG
AACAAGACATCCATGGGCGTCACCATCATTGCCATCTGCCTGGTCCTCGGCACACTGACGGGCCTCATCCGCTTG
TACTCGCGCATTTGCGTCAAAAAGATGCACGCCGAGGACGTCCTCGGCTTCGCGGCCTATGTTTCTTTCGTGGCC
TCGGGCTGGAGTCTGCTGGCCTTTGGACACTACGGCGGCTTCTTCGTGCATCAGTGGAACGTCCAGGCCAAGACG
ATGATAACCATTTCTTACGTCTTGTACTTCTTTCCCATCTTCTACTGCGCGACAATGCTCTTCGCCAAGACGGCC
ATCTTGCTCGAGTGGACGCGCATCTTTGTGCCCGTCATCCGGAACTCGTTCTACTGGATAAGCCGTGTGACTACC
ATCATCAATGTCTGCCTCTACTTGTCGGTCATCGTCGCCACCTCATTGTACTGTGTGCCGGTAGAAAAAGTCTGG
CACAAGTGGGTTCCGGGTCATTGCCTTAATCGCAAGGCTGTCGACACATGCGTCGCCGTCTTCAACCTTGGCATT
GATCTCCTGATATTGGCCCTGCCACAAAGGATCATCTGGTCCCTCAGGATCGACACCTCCAAAAAAATCGGCGTC
TCGATCGTCTTCTCCGTCGGATTGCTGGCTTGTGCCTGCGCCATCGCTCGAACGTACCTGGTGATCCAGCTGGAT
TTTACGGGCGACGTGACGTATAAGCTCTGCGAGACGTTCATGTTTGCCTACTCGGAAATGGCGTGTGTGCTCATG
GTCTTCTACGTGCCGGCGTCGGCGCGCGCCTTTAAGCAGAATAGCCTGCTGTCGAGGATGGTGTCGTCGCTGCGT
TCGTGGACGCGGCTGCCACCGTCGAAGAAGAACAGATCGGCCGAGGACGTCGGAGGGCAGTTCCCGCCGACGATC
GGCAGCAAGCCGATCAACCGCGTCCTTCACTCGGCCGACGAGGAGACGCAGGCGCTGAGCCTTGGCGAGATGAGG
CCGGCGGAGCGCTTCATCGTAAAAACTATGGAGTTTGAGCAGCGCGAAGACGCGGCATCCAAAGCATCGACAGAG
CCTGAGCTACCGAACCATAGACAACATCCTTGGGCGAAGCCGTAG
Gene >Ophio5|4523
ATGCTCGTCTCCACCAATGGCACGCCTCGCAGGCAGCTGGCCGATGCGGAACGGCCAGGTTCAAGGGTCAGGGTC
GCATCGGCAACCAAGCATCTGATAGTCAACGCTCATCAACCCCCCTGCAAGGTGGCCACCAGGGCTCTGACGACC
GTCGACGCTCTCTCGAAGCAGGCAAGGGTCCGGGTCAGCTCGCCCGCACGCCACTTGCTGACGCGCAGCTGCATC
TCTTGAAGTTCTGGACGGCTCCCAAACAGCAGAGAGGCCAAAAGGCGCCCCAGAGCCTCGTCATGTCTCCGCCGC
GTGGCTTCTCCAAGGCAAGCCAACGACAATGGAAAACTTCCCCAGCCTACCGCCCGCCCGGCAACAAGCCATCCT
CAACGGCCCCGGGCTGGCGCCGCCCCCGGGCGTTGTGCCCAACTTCGTCCACCCGCCGAACAAGACATCCATGGG
CGTCACCATCATTGCCATCTGCCTGGTCCTCGGCACACTGACGGGCCTCATCCGCTTGTACTCGCGCATTTGCGT
CAAAAAGATGCACGCCGAGGACGGTATGTGGCCAACCTTTACCGTACCTGCTCCGTGCTCACAGATGTGCCATCT
AGTCCTCGGCTTCGCGGCCTATGTATCGTCGCTCTACCCACCCCGTGTTTATGTCCCAAGCTCACCATGACAGGT
TTCTTTCGTGGCCTCGGGCTGGAGTCTGCTGGCCTTTGGACACTACGGCGGCTTCTTCGTGCATCAGTGGAACGT
CCAGGCCAAGACGATGATAACCATTTCTTACGTCGGTCATGGCCGACCCCCTCGCCATAAGAAGTGCCGGCTGAC
GTCGGACAGGTCTTGTACTTCTTTCCCATCTTCTACTGCGCGACAATGCTCTTCGCCAAGACGGCCATCTTGCTC
GAGTGGACGCGCATCTTTGTGCCCGTCATCCGGAACTCGTTCTACTGGATAAGCCGTGTGACTACCATCATCAAT
GTCTGCCTCTACTTGTCGGTCATCGTCGCCACCTCATTGTACTGTGTGCCGGTAGAAAAAGTCTGGCACAAGTGG
GTTCCGGGTCATTGCCTTAATCGCAAGGCTGTCGACACATGCGTCGCCGTCTTCAACCTTGGCATTGATCTCCTG
ATATTGGCCCTGCCACAAAGGATCATCTGGTCCCTCAGGATCGACACCTCCAAAAAAATCGGCGTCTCGATCGTC
TTCTCCGTCGGATTGCTGTAAGTCGTCTCGTCCGAGGTGATGGGCTTCAAGCTGACGAGATGGCCGGCCAGGGCT
TGTGCCTGCGCCATCGCTCGAACGTACCTGGTGATCCAGCTGGATTTTACGGGCGACGTGACGTATAAGCTCTGC
GAGACGTTCATGTTTGCCTACTCGGAAATGGCGTGTGTGCTCATGGTCTTCTACGTGCCGGCGTCGGCGCGCGCC
TTTAAGCAGAATAGCCTGCTGTCGAGGATGGTGTCGTCGCTGCGTTCGTGGACGCGGCTGCCACCGTCGAAGAAG
AACAGATCGGCCGAGGACGTCGGAGGGCAGTTCCCGCCGACGATCGGCAGCAAGCCGATCAACCGCGTCCTTCAC
TCGGCCGACGAGGAGACGCAGGCGCTGAGCCTTGGCGAGATGAGGCCGGCGGAGCGCTTCATCGTAAAAACTATG
GAGTTTGAGCAGCGCGAAGACGCGGCATCCAAAGCATCGACAGAGCCTGAGCTACCGAACCATAGACAACATCCT
TGGGCGAAGCCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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