Protein ID | Ophio5|4516 |
Gene name | |
Location | scaffold_359:14785..16393 |
Strand | + |
Gene length (bp) | 1608 |
Transcript length (bp) | 1608 |
Coding sequence length (bp) | 1605 |
Protein length (aa) | 535 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 20 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 5120.34 | 140.53 | 10100.20 |
CcL | In ants, during behavior modification | 684.94 | 209.36 | 1160.53 |
CcD | In ants, recently dead | 4401.75 | 505.26 | 8298.24 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.000286 | yes |
SC16a | CcD | 0.780139 | no |
CcL | CcD | 0.000286 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|4516 MNKCASVLAGFAVINGALAALKPDSPVINTPGYRDACHQDGYPASGPNYPCNEAIEYRAVCDQISDMKMHQECVC EPWYRANEDGCIECKDLHGLDGPVGTKYWRNIMEKALDGYCKEKNPATKFGDFWAGVRNSAGEIPQHGKDNVPNN VLGQDISVSRYFKNVPAKPDMSKYLKGSAPTGTVSLLPSSVVVMATQTAEPSPAATTLVPKPKYPSNHTMSVTSS VEVSVKAKVTLYTVGYNCAAILRGEAGVRYNCGNPHYVPNAKIEAVSVVDLEANIVANFPDPSFCGCIENQLIVG QKFILENSTEGRSGYTALKPSADHKKLVVDEKRTSDKPLPGAGPRSFEETGLPTYPASVKSQVDCVPGSKKGSAP KKAETPGSGKEFSASASASASASASVSGSGSAHAHAHAHASVTIAQQGNAQVYVPSSSVKNGAVVAAGAAASLPN TVPQVPAGPAKGSSPAGSKGSSPAGSKGSSPAGSASSPVHPAGTGAPVPPSAPRHGPADAVSVSGAAAMSVPALA LAAGIMVAAF |
Coding | >Ophio5|4516 ATGAACAAGTGCGCCTCCGTCCTCGCCGGCTTCGCCGTCATCAACGGCGCTCTGGCCGCCCTCAAGCCCGACTCA CCCGTCATCAACACGCCTGGATACCGGGATGCCTGCCACCAAGACGGTTACCCTGCCTCGGGGCCTAACTACCCT TGCAACGAGGCCATTGAGTACCGCGCCGTGTGCGATCAGATCTCCGACATGAAGATGCATCAGGAGTGTGTTTGC GAGCCTTGGTATCGCGCCAACGAAGACGGCTGCATCGAGTGCAAGGACTTGCATGGTCTCGACGGCCCCGTCGGC ACCAAGTACTGGAGGAACATCATGGAGAAGGCCCTTGACGGTTACTGCAAGGAGAAGAACCCTGCCACCAAGTTT GGCGACTTCTGGGCTGGTGTTAGGAACTCAGCCGGCGAGATCCCCCAGCACGGCAAGGATAACGTGCCCAACAAT GTCCTGGGTCAGGACATCAGCGTCTCTCGCTACTTCAAGAACGTCCCGGCCAAGCCCGACATGTCCAAGTACCTG AAGGGCTCGGCCCCGACGGGAACCGTCTCTCTTCTCCCGTCTTCGGTTGTCGTCATGGCTACCCAGACGGCCGAG CCCTCCCCTGCGGCCACGACGCTGGTCCCCAAGCCCAAGTACCCCTCTAACCACACCATGTCCGTGACGTCTTCT GTCGAGGTTTCCGTCAAGGCCAAGGTTACTCTCTACACTGTCGGATACAACTGCGCTGCCATTCTCAGGGGCGAG GCCGGCGTCAGGTACAACTGCGGAAACCCTCACTACGTGCCCAATGCCAAGATCGAGGCCGTCTCTGTTGTTGAC CTCGAGGCCAACATTGTGGCCAACTTCCCTGACCCCAGCTTCTGCGGCTGCATTGAGAACCAGCTCATCGTCGGC CAGAAGTTCATCCTTGAGAACTCTACCGAGGGTCGCTCTGGCTACACTGCCCTCAAGCCTTCCGCGGACCACAAG AAGCTCGTCGTTGACGAGAAGCGCACTTCGGACAAGCCTCTGCCCGGTGCTGGCCCTCGGAGCTTCGAGGAGACT GGCCTCCCGACTTACCCTGCCAGCGTCAAGTCTCAAGTCGATTGCGTTCCCGGCTCCAAGAAGGGCTCTGCTCCC AAGAAGGCTGAGACCCCTGGTTCTGGCAAGGAGTTCTCTGCCTCTGCCTCTGCCTCTGCTTCGGCCTCTGCTTCC GTCTCTGGCTCCGGCTCCGCCCACGCCCACGCCCACGCCCACGCTTCTGTCACCATCGCCCAGCAGGGCAACGCC CAAGTCTACGTGCCGTCATCCAGTGTCAAGAATGGCGCCGTCGTCGCGGCCGGTGCTGCCGCCAGCCTGCCCAAC ACCGTTCCTCAGGTCCCGGCTGGCCCTGCCAAGGGTTCTTCTCCTGCCGGCTCCAAGGGTTCTTCTCCCGCCGGC TCTAAGGGTTCTTCTCCCGCCGGTTCCGCTTCCTCTCCGGTCCACCCTGCCGGCACCGGCGCACCTGTTCCCCCC TCGGCCCCCCGCCATGGACCTGCCGACGCTGTGAGCGTCAGCGGCGCTGCTGCCATGAGCGTCCCTGCTCTGGCC CTCGCCGCCGGCATCATGGTTGCCGCCTTC |
Transcript | >Ophio5|4516 ATGAACAAGTGCGCCTCCGTCCTCGCCGGCTTCGCCGTCATCAACGGCGCTCTGGCCGCCCTCAAGCCCGACTCA CCCGTCATCAACACGCCTGGATACCGGGATGCCTGCCACCAAGACGGTTACCCTGCCTCGGGGCCTAACTACCCT TGCAACGAGGCCATTGAGTACCGCGCCGTGTGCGATCAGATCTCCGACATGAAGATGCATCAGGAGTGTGTTTGC GAGCCTTGGTATCGCGCCAACGAAGACGGCTGCATCGAGTGCAAGGACTTGCATGGTCTCGACGGCCCCGTCGGC ACCAAGTACTGGAGGAACATCATGGAGAAGGCCCTTGACGGTTACTGCAAGGAGAAGAACCCTGCCACCAAGTTT GGCGACTTCTGGGCTGGTGTTAGGAACTCAGCCGGCGAGATCCCCCAGCACGGCAAGGATAACGTGCCCAACAAT GTCCTGGGTCAGGACATCAGCGTCTCTCGCTACTTCAAGAACGTCCCGGCCAAGCCCGACATGTCCAAGTACCTG AAGGGCTCGGCCCCGACGGGAACCGTCTCTCTTCTCCCGTCTTCGGTTGTCGTCATGGCTACCCAGACGGCCGAG CCCTCCCCTGCGGCCACGACGCTGGTCCCCAAGCCCAAGTACCCCTCTAACCACACCATGTCCGTGACGTCTTCT GTCGAGGTTTCCGTCAAGGCCAAGGTTACTCTCTACACTGTCGGATACAACTGCGCTGCCATTCTCAGGGGCGAG GCCGGCGTCAGGTACAACTGCGGAAACCCTCACTACGTGCCCAATGCCAAGATCGAGGCCGTCTCTGTTGTTGAC CTCGAGGCCAACATTGTGGCCAACTTCCCTGACCCCAGCTTCTGCGGCTGCATTGAGAACCAGCTCATCGTCGGC CAGAAGTTCATCCTTGAGAACTCTACCGAGGGTCGCTCTGGCTACACTGCCCTCAAGCCTTCCGCGGACCACAAG AAGCTCGTCGTTGACGAGAAGCGCACTTCGGACAAGCCTCTGCCCGGTGCTGGCCCTCGGAGCTTCGAGGAGACT GGCCTCCCGACTTACCCTGCCAGCGTCAAGTCTCAAGTCGATTGCGTTCCCGGCTCCAAGAAGGGCTCTGCTCCC AAGAAGGCTGAGACCCCTGGTTCTGGCAAGGAGTTCTCTGCCTCTGCCTCTGCCTCTGCTTCGGCCTCTGCTTCC GTCTCTGGCTCCGGCTCCGCCCACGCCCACGCCCACGCCCACGCTTCTGTCACCATCGCCCAGCAGGGCAACGCC CAAGTCTACGTGCCGTCATCCAGTGTCAAGAATGGCGCCGTCGTCGCGGCCGGTGCTGCCGCCAGCCTGCCCAAC ACCGTTCCTCAGGTCCCGGCTGGCCCTGCCAAGGGTTCTTCTCCTGCCGGCTCCAAGGGTTCTTCTCCCGCCGGC TCTAAGGGTTCTTCTCCCGCCGGTTCCGCTTCCTCTCCGGTCCACCCTGCCGGCACCGGCGCACCTGTTCCCCCC TCGGCCCCCCGCCATGGACCTGCCGACGCTGTGAGCGTCAGCGGCGCTGCTGCCATGAGCGTCCCTGCTCTGGCC CTCGCCGCCGGCATCATGGTTGCCGCCTTCTAA |
Gene | >Ophio5|4516 ATGAACAAGTGCGCCTCCGTCCTCGCCGGCTTCGCCGTCATCAACGGCGCTCTGGCCGCCCTCAAGCCCGACTCA CCCGTCATCAACACGCCTGGATACCGGGATGCCTGCCACCAAGACGGTTACCCTGCCTCGGGGCCTAACTACCCT TGCAACGAGGCCATTGAGTACCGCGCCGTGTGCGATCAGATCTCCGACATGAAGATGCATCAGGAGTGTGTTTGC GAGCCTTGGTATCGCGCCAACGAAGACGGCTGCATCGAGTGCAAGGACTTGCATGGTCTCGACGGCCCCGTCGGC ACCAAGTACTGGAGGAACATCATGGAGAAGGCCCTTGACGGTTACTGCAAGGAGAAGAACCCTGCCACCAAGTTT GGCGACTTCTGGGCTGGTGTTAGGAACTCAGCCGGCGAGATCCCCCAGCACGGCAAGGATAACGTGCCCAACAAT GTCCTGGGTCAGGACATCAGCGTCTCTCGCTACTTCAAGAACGTCCCGGCCAAGCCCGACATGTCCAAGTACCTG AAGGGCTCGGCCCCGACGGGAACCGTCTCTCTTCTCCCGTCTTCGGTTGTCGTCATGGCTACCCAGACGGCCGAG CCCTCCCCTGCGGCCACGACGCTGGTCCCCAAGCCCAAGTACCCCTCTAACCACACCATGTCCGTGACGTCTTCT GTCGAGGTTTCCGTCAAGGCCAAGGTTACTCTCTACACTGTCGGATACAACTGCGCTGCCATTCTCAGGGGCGAG GCCGGCGTCAGGTACAACTGCGGAAACCCTCACTACGTGCCCAATGCCAAGATCGAGGCCGTCTCTGTTGTTGAC CTCGAGGCCAACATTGTGGCCAACTTCCCTGACCCCAGCTTCTGCGGCTGCATTGAGAACCAGCTCATCGTCGGC CAGAAGTTCATCCTTGAGAACTCTACCGAGGGTCGCTCTGGCTACACTGCCCTCAAGCCTTCCGCGGACCACAAG AAGCTCGTCGTTGACGAGAAGCGCACTTCGGACAAGCCTCTGCCCGGTGCTGGCCCTCGGAGCTTCGAGGAGACT GGCCTCCCGACTTACCCTGCCAGCGTCAAGTCTCAAGTCGATTGCGTTCCCGGCTCCAAGAAGGGCTCTGCTCCC AAGAAGGCTGAGACCCCTGGTTCTGGCAAGGAGTTCTCTGCCTCTGCCTCTGCCTCTGCTTCGGCCTCTGCTTCC GTCTCTGGCTCCGGCTCCGCCCACGCCCACGCCCACGCCCACGCTTCTGTCACCATCGCCCAGCAGGGCAACGCC CAAGTCTACGTGCCGTCATCCAGTGTCAAGAATGGCGCCGTCGTCGCGGCCGGTGCTGCCGCCAGCCTGCCCAAC ACCGTTCCTCAGGTCCCGGCTGGCCCTGCCAAGGGTTCTTCTCCTGCCGGCTCCAAGGGTTCTTCTCCCGCCGGC TCTAAGGGTTCTTCTCCCGCCGGTTCCGCTTCCTCTCCGGTCCACCCTGCCGGCACCGGCGCACCTGTTCCCCCC TCGGCCCCCCGCCATGGACCTGCCGACGCTGTGAGCGTCAGCGGCGCTGCTGCCATGAGCGTCCCTGCTCTGGCC CTCGCCGCCGGCATCATGGTTGCCGCCTTCTAA |