© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|4515 |
| Gene name | |
| Location | scaffold_359:12680..13322 |
| Strand | - |
| Gene length (bp) | 642 |
| Transcript length (bp) | 504 |
| Coding sequence length (bp) | 501 |
| Protein length (aa) | 167 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.4078 | 0.3774 | 0.3722 | 0.1809 | 0.3467 | 0.1005 | 0.3329 | 0.2966 | 0.3368 | 0.1255 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 4 | 26 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 15941 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps kimflemingae | Ophio5|4515 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|4515 MTDLRLLACYAISMSMSAIFTAASLREWRRKQFSKRVERMENCRAKECSLRRGIRSYYRVSKYYHHYIITRTLGP IEQSTRNLLALLTHWIPLQATIDGLTHSTSSSSPVTVVCGRKGLTGRILYQLIFTLFPVVNRTGEAKGSPSCYSV ECHTGRFVDVSGLKSPS |
| Coding | >Ophio5|4515 ATGACAGACCTGCGTCTCCTTGCATGCTATGCTATTTCTATGTCCATGTCTGCCATCTTTACAGCTGCCTCATTA CGCGAGTGGAGACGCAAACAATTTTCAAAGCGGGTGGAGCGGATGGAAAACTGCCGCGCTAAGGAATGTTCTTTA CGTCGCGGAATCCGCTCCTACTACCGCGTTTCCAAGTACTACCATCACTATATTATCACCCGTACCCTCGGTCCC ATCGAGCAAAGCACTAGAAACTTGCTCGCGCTGCTCACACACTGGATCCCCCTACAGGCAACTATTGACGGCCTG ACGCACTCCACGTCCTCCTCATCACCGGTCACCGTAGTATGCGGAAGGAAGGGCCTTACCGGCCGGATCTTATAT CAGCTCATATTTACGCTTTTTCCGGTGGTGAATCGAACAGGTGAAGCAAAGGGATCTCCCAGTTGCTATTCCGTA GAATGCCATACCGGGCGCTTTGTTGATGTCAGTGGATTAAAGTCACCTTCA |
| Transcript | >Ophio5|4515 ATGACAGACCTGCGTCTCCTTGCATGCTATGCTATTTCTATGTCCATGTCTGCCATCTTTACAGCTGCCTCATTA CGCGAGTGGAGACGCAAACAATTTTCAAAGCGGGTGGAGCGGATGGAAAACTGCCGCGCTAAGGAATGTTCTTTA CGTCGCGGAATCCGCTCCTACTACCGCGTTTCCAAGTACTACCATCACTATATTATCACCCGTACCCTCGGTCCC ATCGAGCAAAGCACTAGAAACTTGCTCGCGCTGCTCACACACTGGATCCCCCTACAGGCAACTATTGACGGCCTG ACGCACTCCACGTCCTCCTCATCACCGGTCACCGTAGTATGCGGAAGGAAGGGCCTTACCGGCCGGATCTTATAT CAGCTCATATTTACGCTTTTTCCGGTGGTGAATCGAACAGGTGAAGCAAAGGGATCTCCCAGTTGCTATTCCGTA GAATGCCATACCGGGCGCTTTGTTGATGTCAGTGGATTAAAGTCACCTTCATAG |
| Gene | >Ophio5|4515 ATGACAGACCTGCGTCTCCTTGCATGCTATGCTATTTCTATGTCCATGTCTGCCATCTTTACAGCTGCCTCATGT ATGCTGCATGTATGTATATTGTCTCTATACTTGTGGCATCGCTCAGTACGCGAGTGGAGACGCAAACAATTTTCA AAGCGGGTGGAGCGGATGGAAAACTGCCGCGCTAAGGAATGTTCTTTACGTCGCGGAATCCGCTCCTACTACCGC GTTTCCAAGTACTACCATCACTATATTATCACCCGTACCCTCGGTCCCATCGAGCAAAGCACTAGAAACTTGCTC GCGCTGCTCACACACTGGATCCCCCTACAGGCAACTATTGACGGCCTGACGCACTCCACGTCCTCCTCATCACCG GTCACCGTAGTATGCGGAAGGAAGGGCCTTACCGGCCGGATCTTATATCAGCTCATATTTACGCTTTTTCCGGTG GTGAATCGTGAGCCCACCCGCACCAGCTATTCGGCAAGCTGGCGTTTGCTGGATAGACAGGGACGAAGCTTTGTT GATGAATTAACGTTTGCTTCAGGAACAGGTGAAGCAAAGGGATCTCCCAGTTGCTATTCCGTAGAATGCCATACC GGGCGCTTTGTTGATGTCAGTGGATTAAAGTCACCTTCATAG |