Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4515
Gene name
Locationscaffold_359:12680..13322
Strand-
Gene length (bp)642
Transcript length (bp)504
Coding sequence length (bp)501
Protein length (aa) 167

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.5

Transmembrane Domains

Domain # Start End Length
1 4 26 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4515
MTDLRLLACYAISMSMSAIFTAASLREWRRKQFSKRVERMENCRAKECSLRRGIRSYYRVSKYYHHYIITRTLGP
IEQSTRNLLALLTHWIPLQATIDGLTHSTSSSSPVTVVCGRKGLTGRILYQLIFTLFPVVNRTGEAKGSPSCYSV
ECHTGRFVDVSGLKSPS
Coding >Ophio5|4515
ATGACAGACCTGCGTCTCCTTGCATGCTATGCTATTTCTATGTCCATGTCTGCCATCTTTACAGCTGCCTCATTA
CGCGAGTGGAGACGCAAACAATTTTCAAAGCGGGTGGAGCGGATGGAAAACTGCCGCGCTAAGGAATGTTCTTTA
CGTCGCGGAATCCGCTCCTACTACCGCGTTTCCAAGTACTACCATCACTATATTATCACCCGTACCCTCGGTCCC
ATCGAGCAAAGCACTAGAAACTTGCTCGCGCTGCTCACACACTGGATCCCCCTACAGGCAACTATTGACGGCCTG
ACGCACTCCACGTCCTCCTCATCACCGGTCACCGTAGTATGCGGAAGGAAGGGCCTTACCGGCCGGATCTTATAT
CAGCTCATATTTACGCTTTTTCCGGTGGTGAATCGAACAGGTGAAGCAAAGGGATCTCCCAGTTGCTATTCCGTA
GAATGCCATACCGGGCGCTTTGTTGATGTCAGTGGATTAAAGTCACCTTCA
Transcript >Ophio5|4515
ATGACAGACCTGCGTCTCCTTGCATGCTATGCTATTTCTATGTCCATGTCTGCCATCTTTACAGCTGCCTCATTA
CGCGAGTGGAGACGCAAACAATTTTCAAAGCGGGTGGAGCGGATGGAAAACTGCCGCGCTAAGGAATGTTCTTTA
CGTCGCGGAATCCGCTCCTACTACCGCGTTTCCAAGTACTACCATCACTATATTATCACCCGTACCCTCGGTCCC
ATCGAGCAAAGCACTAGAAACTTGCTCGCGCTGCTCACACACTGGATCCCCCTACAGGCAACTATTGACGGCCTG
ACGCACTCCACGTCCTCCTCATCACCGGTCACCGTAGTATGCGGAAGGAAGGGCCTTACCGGCCGGATCTTATAT
CAGCTCATATTTACGCTTTTTCCGGTGGTGAATCGAACAGGTGAAGCAAAGGGATCTCCCAGTTGCTATTCCGTA
GAATGCCATACCGGGCGCTTTGTTGATGTCAGTGGATTAAAGTCACCTTCATAG
Gene >Ophio5|4515
ATGACAGACCTGCGTCTCCTTGCATGCTATGCTATTTCTATGTCCATGTCTGCCATCTTTACAGCTGCCTCATGT
ATGCTGCATGTATGTATATTGTCTCTATACTTGTGGCATCGCTCAGTACGCGAGTGGAGACGCAAACAATTTTCA
AAGCGGGTGGAGCGGATGGAAAACTGCCGCGCTAAGGAATGTTCTTTACGTCGCGGAATCCGCTCCTACTACCGC
GTTTCCAAGTACTACCATCACTATATTATCACCCGTACCCTCGGTCCCATCGAGCAAAGCACTAGAAACTTGCTC
GCGCTGCTCACACACTGGATCCCCCTACAGGCAACTATTGACGGCCTGACGCACTCCACGTCCTCCTCATCACCG
GTCACCGTAGTATGCGGAAGGAAGGGCCTTACCGGCCGGATCTTATATCAGCTCATATTTACGCTTTTTCCGGTG
GTGAATCGTGAGCCCACCCGCACCAGCTATTCGGCAAGCTGGCGTTTGCTGGATAGACAGGGACGAAGCTTTGTT
GATGAATTAACGTTTGCTTCAGGAACAGGTGAAGCAAAGGGATCTCCCAGTTGCTATTCCGTAGAATGCCATACC
GGGCGCTTTGTTGATGTCAGTGGATTAAAGTCACCTTCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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