Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|4464
Gene name
Location	scaffold_354:11587..14056
Strand	-
Gene length (bp)	2469
Transcript length (bp)	2088
Coding sequence length (bp)	2085
Protein length (aa)	695

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00566	RabGAP-TBC	Rab-GTPase-TBC domain	2.9E-13	217	295

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q92609\|TBCD5_HUMAN	TBC1 domain family member 5 OS=Homo sapiens GN=TBC1D5 PE=1 SV=1	42	310	7.0E-29
sp\|Q80XQ2\|TBCD5_MOUSE	TBC1 domain family member 5 OS=Mus musculus GN=Tbc1d5 PE=1 SV=2	42	310	5.0E-27
sp\|Q54TA5\|TBC5B_DICDI	TBC1 domain family member 5 homolog B OS=Dictyostelium discoideum GN=tbc1d5B PE=3 SV=1	202	310	8.0E-23
sp\|Q9NVG8\|TBC13_HUMAN	TBC1 domain family member 13 OS=Homo sapiens GN=TBC1D13 PE=1 SV=3	227	310	1.0E-13
sp\|Q54VM3\|TBC5A_DICDI	TBC1 domain family member 5 homolog A OS=Dictyostelium discoideum GN=tbc1d5A PE=1 SV=1	223	314	4.0E-13

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q92609\|TBCD5_HUMAN	TBC1 domain family member 5 OS=Homo sapiens GN=TBC1D5 PE=1 SV=1	42	310	7.0E-29
sp\|Q80XQ2\|TBCD5_MOUSE	TBC1 domain family member 5 OS=Mus musculus GN=Tbc1d5 PE=1 SV=2	42	310	5.0E-27
sp\|Q54TA5\|TBC5B_DICDI	TBC1 domain family member 5 homolog B OS=Dictyostelium discoideum GN=tbc1d5B PE=3 SV=1	202	310	8.0E-23
sp\|Q9NVG8\|TBC13_HUMAN	TBC1 domain family member 13 OS=Homo sapiens GN=TBC1D13 PE=1 SV=3	227	310	1.0E-13
sp\|Q54VM3\|TBC5A_DICDI	TBC1 domain family member 5 homolog A OS=Dictyostelium discoideum GN=tbc1d5A PE=1 SV=1	223	314	4.0E-13
sp\|Q8R3D1\|TBC13_MOUSE	TBC1 domain family member 13 OS=Mus musculus GN=Tbc1d13 PE=1 SV=1	227	310	2.0E-12

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 61	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|4464 MRPLEETLSRWKLTVDCGDSLADLQRAVRNNGSASPCLAGCRSVCWKTFILSTRAGLNQALEDGRREYGQRRSHF LNFIEHPEALAQLAIDPLTDDPESPWNTLRHDETIRNEIQQDVQRLPDEVNYHQDRVQAMIVNILFVYCKVYPSR GGACGGAGRHQPDRSCSRRSVFGRVHARGPRFVVFYELRDAGSPSRPSQAADAASEQLSTIVDKSRFIHEVCLCS VDEELATHLVNMEVLPQIFLIRWIRLLFSREFPFDQVLFMWDTIFAVDPSLHLIDFICCAMLLRIRWQLLEADYA VCLQLLLKYPQPLPPHGPHTFIDDAIYLQAHADASGGNALIKKYSGRTPDASSPSNRARTRTPGRQGSGSPRRRT YGGRSPLTSPTRFIQHQGGVESIFHGAAKSAKGVLERGEKFGLNSAVREAVGEIRRNVQIFNESRQILKSPKGTL DDGAAAGALAAMERRNKQLAALLEETVASLKSISLSSLEDKSKSLDVIELAAAKVQFVQLYLGDSSMEMPPAETS DEPEGEAKSEPGDDVSKGEDSTDRAATGPSQSAKDVELDEPRLDVAGVDQADTTRHSKQEASDADEAVRDDSARA GEPTRPAAPIPTRSTLAQSSFSWMLEPDAPSRSPSVPSTSRHGTIQHRKRPSSNASRDRNAFLFGEGMADGERGP SSQGDEIFGLEPISRAKDKT
Coding	>Ophio5\|4464 ATGAGACCTCTGGAGGAGACGCTGTCGAGATGGAAACTAACCGTCGATTGCGGCGACAGCCTCGCCGACTTACAG CGCGCCGTCAGGAATAATGGTTCCGCAAGTCCGTGTCTCGCTGGATGCCGCTCCGTGTGCTGGAAGACGTTCATC TTGTCTACTCGCGCGGGCCTGAACCAGGCTCTCGAAGACGGCAGACGGGAATACGGCCAGCGCAGAAGCCACTTT CTCAACTTCATCGAGCATCCAGAGGCCCTGGCCCAGCTCGCAATCGACCCGCTGACCGACGACCCTGAGTCTCCC TGGAACACACTGCGCCATGACGAGACGATCCGCAACGAGATCCAACAGGACGTTCAGCGGCTTCCTGACGAGGTC AATTACCACCAAGACCGGGTGCAGGCCATGATTGTCAACATCCTCTTTGTCTACTGCAAGGTTTACCCGAGCAGA GGCGGTGCATGTGGTGGAGCAGGACGCCATCAACCGGACCGCAGCTGCAGCCGGCGCAGCGTCTTTGGACGAGTC CATGCTCGTGGTCCTCGATTCGTCGTGTTTTACGAGCTGAGAGACGCAGGATCTCCGTCGAGACCGTCTCAGGCA GCTGATGCCGCCTCTGAACAACTGTCGACCATTGTCGACAAGAGCAGGTTCATCCACGAGGTCTGCCTGTGCAGT GTGGACGAAGAGCTAGCCACGCATCTCGTGAATATGGAGGTGCTGCCGCAGATTTTCCTCATCCGATGGATACGA CTGCTCTTCAGTCGAGAATTCCCCTTCGACCAAGTCCTCTTTATGTGGGACACCATTTTTGCCGTCGATCCTTCT CTTCATTTAATAGATTTTATTTGTTGTGCCATGCTGCTCCGCATTCGATGGCAATTGCTTGAAGCCGACTATGCT GTCTGTCTTCAACTTCTCTTAAAGTACCCTCAACCGCTACCGCCACATGGACCACACACTTTTATCGATGACGCC ATCTATCTCCAGGCCCATGCGGATGCGTCAGGGGGTAATGCTCTCATCAAGAAATACAGCGGCAGAACACCAGAT GCCTCAAGCCCGTCAAATCGCGCTCGAACGAGAACACCGGGTCGTCAAGGGTCGGGATCTCCTCGACGGAGAACA TACGGCGGAAGGTCGCCGCTCACTTCACCAACACGTTTCATTCAGCATCAAGGCGGCGTGGAATCCATATTTCAT GGCGCGGCCAAGAGCGCCAAGGGGGTCTTGGAACGAGGAGAAAAGTTTGGCCTTAACAGTGCAGTGCGGGAGGCC GTGGGAGAGATTAGGCGGAATGTGCAGATTTTCAACGAGTCCCGACAGATACTCAAGTCGCCAAAGGGCACCCTC GACGACGGCGCCGCAGCAGGAGCTCTCGCCGCCATGGAGAGGCGTAATAAGCAACTGGCAGCACTCCTGGAAGAG ACGGTCGCGAGTCTCAAATCAATTTCCCTGTCGAGCCTTGAGGACAAGAGCAAGAGCCTGGACGTAATCGAGCTC GCGGCAGCCAAGGTTCAATTCGTCCAGTTATATCTCGGTGATTCGTCCATGGAGATGCCACCCGCCGAGACATCA GACGAGCCTGAAGGCGAGGCCAAGAGTGAGCCCGGAGACGACGTCTCGAAAGGGGAAGACTCCACCGATAGGGCT GCGACTGGGCCGAGTCAATCAGCCAAGGATGTCGAGCTCGACGAGCCCAGACTGGATGTTGCAGGCGTGGACCAA GCAGACACGACTCGGCACTCGAAACAAGAAGCTTCAGACGCCGACGAGGCAGTAAGGGACGACTCGGCTCGTGCC GGCGAGCCCACTCGTCCCGCCGCGCCGATCCCTACGCGCTCGACACTCGCACAGTCGTCATTTTCGTGGATGCTG GAGCCCGACGCACCGAGCCGCAGCCCGAGCGTACCGTCGACCAGCAGACATGGCACCATACAGCACAGGAAGCGG CCCTCGAGCAACGCCAGCCGAGACAGGAACGCGTTCCTGTTTGGTGAGGGCATGGCAGACGGTGAGAGGGGGCCG TCGTCCCAGGGTGATGAGATTTTTGGGCTGGAGCCTATCAGCAGGGCTAAAGACAAGACG
Transcript	>Ophio5\|4464 ATGAGACCTCTGGAGGAGACGCTGTCGAGATGGAAACTAACCGTCGATTGCGGCGACAGCCTCGCCGACTTACAG CGCGCCGTCAGGAATAATGGTTCCGCAAGTCCGTGTCTCGCTGGATGCCGCTCCGTGTGCTGGAAGACGTTCATC TTGTCTACTCGCGCGGGCCTGAACCAGGCTCTCGAAGACGGCAGACGGGAATACGGCCAGCGCAGAAGCCACTTT CTCAACTTCATCGAGCATCCAGAGGCCCTGGCCCAGCTCGCAATCGACCCGCTGACCGACGACCCTGAGTCTCCC TGGAACACACTGCGCCATGACGAGACGATCCGCAACGAGATCCAACAGGACGTTCAGCGGCTTCCTGACGAGGTC AATTACCACCAAGACCGGGTGCAGGCCATGATTGTCAACATCCTCTTTGTCTACTGCAAGGTTTACCCGAGCAGA GGCGGTGCATGTGGTGGAGCAGGACGCCATCAACCGGACCGCAGCTGCAGCCGGCGCAGCGTCTTTGGACGAGTC CATGCTCGTGGTCCTCGATTCGTCGTGTTTTACGAGCTGAGAGACGCAGGATCTCCGTCGAGACCGTCTCAGGCA GCTGATGCCGCCTCTGAACAACTGTCGACCATTGTCGACAAGAGCAGGTTCATCCACGAGGTCTGCCTGTGCAGT GTGGACGAAGAGCTAGCCACGCATCTCGTGAATATGGAGGTGCTGCCGCAGATTTTCCTCATCCGATGGATACGA CTGCTCTTCAGTCGAGAATTCCCCTTCGACCAAGTCCTCTTTATGTGGGACACCATTTTTGCCGTCGATCCTTCT CTTCATTTAATAGATTTTATTTGTTGTGCCATGCTGCTCCGCATTCGATGGCAATTGCTTGAAGCCGACTATGCT GTCTGTCTTCAACTTCTCTTAAAGTACCCTCAACCGCTACCGCCACATGGACCACACACTTTTATCGATGACGCC ATCTATCTCCAGGCCCATGCGGATGCGTCAGGGGGTAATGCTCTCATCAAGAAATACAGCGGCAGAACACCAGAT GCCTCAAGCCCGTCAAATCGCGCTCGAACGAGAACACCGGGTCGTCAAGGGTCGGGATCTCCTCGACGGAGAACA TACGGCGGAAGGTCGCCGCTCACTTCACCAACACGTTTCATTCAGCATCAAGGCGGCGTGGAATCCATATTTCAT GGCGCGGCCAAGAGCGCCAAGGGGGTCTTGGAACGAGGAGAAAAGTTTGGCCTTAACAGTGCAGTGCGGGAGGCC GTGGGAGAGATTAGGCGGAATGTGCAGATTTTCAACGAGTCCCGACAGATACTCAAGTCGCCAAAGGGCACCCTC GACGACGGCGCCGCAGCAGGAGCTCTCGCCGCCATGGAGAGGCGTAATAAGCAACTGGCAGCACTCCTGGAAGAG ACGGTCGCGAGTCTCAAATCAATTTCCCTGTCGAGCCTTGAGGACAAGAGCAAGAGCCTGGACGTAATCGAGCTC GCGGCAGCCAAGGTTCAATTCGTCCAGTTATATCTCGGTGATTCGTCCATGGAGATGCCACCCGCCGAGACATCA GACGAGCCTGAAGGCGAGGCCAAGAGTGAGCCCGGAGACGACGTCTCGAAAGGGGAAGACTCCACCGATAGGGCT GCGACTGGGCCGAGTCAATCAGCCAAGGATGTCGAGCTCGACGAGCCCAGACTGGATGTTGCAGGCGTGGACCAA GCAGACACGACTCGGCACTCGAAACAAGAAGCTTCAGACGCCGACGAGGCAGTAAGGGACGACTCGGCTCGTGCC GGCGAGCCCACTCGTCCCGCCGCGCCGATCCCTACGCGCTCGACACTCGCACAGTCGTCATTTTCGTGGATGCTG GAGCCCGACGCACCGAGCCGCAGCCCGAGCGTACCGTCGACCAGCAGACATGGCACCATACAGCACAGGAAGCGG CCCTCGAGCAACGCCAGCCGAGACAGGAACGCGTTCCTGTTTGGTGAGGGCATGGCAGACGGTGAGAGGGGGCCG TCGTCCCAGGGTGATGAGATTTTTGGGCTGGAGCCTATCAGCAGGGCTAAAGACAAGACGTGA
Gene	>Ophio5\|4464 ATGAGACCTCTGGAGGAGACGCTGTGAGTCGCCGTGTGCCCGGCCGTGGCTCGTGAGGAGGCGGGTGAGGCTGAC GCGACTTCGTATCCAGGTCGAGATGGAAACTAACCGTCGATTGCGGCGACAGCCTCGCCGACTTACAGCGCGCCG TCAGGAATAATGGTTCCGCAAGTCCGTGTCTCGCTGGATGCCGCTCCGTGTGCTGGAAGGTGTGTCGGCCCCAGG CTCGCGTCCTCGTGCCTGGCCGTTGACCACCCGCTCTCGTTCCGCCTTACAAGACGTTCATCTTGTCTACTCGCG CGGGCCTGAACCAGGCTCTCGAAGACGGCAGACGGGAATACGGCCAGCGCAGAAGCCACTTTCTCAACTTCATCG AGCATCCAGAGGCCCTGGCCCAGCTCGCAATCGACCCGCTGACCGACGACCCTGAGGTGAGCCGAGGCCGACGAC GGCCCGACGTCTCACTAACAGCGTTGGCAGTCTCCCTGGAACACACTGCGCCATGACGAGACGATCCGCAACGAG ATCCAACAGGACGTTCAGCGGCTTCCTGACGAGGTCAATTACCACCAAGACCGGGTGCAGGCCATGATTGTCAAC ATCCTCTTTGTCTACTGCAAGGTTTACCCGAGCAGAGGCGGGTATCGCCAGGGAATGCACGAACTGTTGGCTCCC ATAGTGCATGTGGTGGAGCAGGACGCCATCAACCGGACCGCAGCTGCAGCCGGCGCAGCGTCTTTGGACGAGTCC ATGCTCGTGGTCCTCGATTCGTCGTACGTCGAGCACGATGCTTACATACTGTTTTCGCGGCTCATGGAGCACGCC CAGGTGTTTTACGAGCTGAGAGACGCAGGATCTCCGTCGAGACCGTCTCAGGCAGCTGATGCCGCCTCTGAACAA CTGTCGACCATTGTCGACAAGAGCAGGTTCATCCACGAGGTCTGCCTGTGCAGTGTGGACGAAGAGCTAGCCACG CATCTCGTGAATATGGAGGTGCTGCCGCAGATTTTCCTCATGTAAGTGAAGTTGCCGGCTTGACTGCTTTGAATG TCACTAAGCCACGACGCAGCCGATGGATACGACTGCTCTTCAGTCGAGAATTCCCCTTCGACCAAGTCCTCTTTA TGTGGGACACCATTTTTGCCGTCGATCCTTCTCTTCATTTAATAGATTTTATTTGTTGTGCCATGCTGCTCCGCA TTCGATGGCAATGTGAGTTGAGAAGACGCCACAACAGCTTTTCTATCTGACTCCATTGCAGTGCTTGAAGCCGAC TATGCTGTCTGTCTTCAACTTCTCTTAAAGTACCCTCAACCGCTACCGCCACATGGACCACACACTTTTATCGAT GACGCCATCTATCTCCAGGCCCATGCGGATGCGTCAGGGGGTAATGCTCTCATCAAGAAATACAGCGGCAGAACA CCAGATGCCTCAAGCCCGTCAAATCGCGCTCGAACGAGAACACCGGGTCGTCAAGGGTCGGGATCTCCTCGACGG AGAACATACGGCGGAAGGTCGCCGCTCACTTCACCAACACGTTTCATTCAGCATCAAGGCGGCGTGGAATCCATA TTTCATGGCGCGGCCAAGAGCGCCAAGGGGGTCTTGGAACGAGGAGAAAAGTTTGGCCTTAACAGTGCAGTGCGG GAGGCCGTGGGAGAGATTAGGCGGAATGTGCAGATTTTCAACGAGTCCCGACAGATACTCAAGTCGCCAAAGGGC ACCCTCGACGACGGCGCCGCAGCAGGAGCTCTCGCCGCCATGGAGAGGCGTAATAAGCAACTGGCAGCACTCCTG GAAGAGACGGTCGCGAGTCTCAAATCAATTTCCCTGTCGAGCCTTGAGGACAAGAGCAAGAGCCTGGACGTAATC GAGCTCGCGGCAGCCAAGGTTCAATTCGTCCAGTTATATCTCGGTGATTCGTCCATGGAGATGCCACCCGCCGAG ACATCAGACGAGCCTGAAGGCGAGGCCAAGAGTGAGCCCGGAGACGACGTCTCGAAAGGGGAAGACTCCACCGAT AGGGCTGCGACTGGGCCGAGTCAATCAGCCAAGGATGTCGAGCTCGACGAGCCCAGACTGGATGTTGCAGGCGTG GACCAAGCAGACACGACTCGGCACTCGAAACAAGAAGCTTCAGACGCCGACGAGGCAGTAAGGGACGACTCGGCT CGTGCCGGCGAGCCCACTCGTCCCGCCGCGCCGATCCCTACGCGCTCGACACTCGCACAGTCGTCATTTTCGTGG ATGCTGGAGCCCGACGCACCGAGCCGCAGCCCGAGCGTACCGTCGACCAGCAGACATGGCACCATACAGCACAGG AAGCGGCCCTCGAGCAACGCCAGCCGAGACAGGAACGCGTTCCTGTTTGGTGAGGGCATGGCAGACGGTGAGAGG GGGCCGTCGTCCCAGGGTGATGAGATTTTTGGGCTGGAGCCTATCAGCAGGGCTAAAGACAAGACGTGA

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