Protein ID | Ophio5|4459 |
Gene name | |
Location | scaffold_353:14333..15950 |
Strand | + |
Gene length (bp) | 1617 |
Transcript length (bp) | 1077 |
Coding sequence length (bp) | 1074 |
Protein length (aa) | 358 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00120 | Gln-synt_C | Glutamine synthetase, catalytic domain | 9.0E-11 | 171 | 258 |
PF03951 | Gln-synt_N | Glutamine synthetase, beta-Grasp domain | 1.7E-12 | 27 | 102 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9C2U9|GLNA_GIBFU | Glutamine synthetase OS=Gibberella fujikuroi GN=GLN1 PE=3 SV=1 | 7 | 351 | 0.0E+00 |
sp|Q9UUN6|GLNA_FUSSH | Glutamine synthetase OS=Fusarium solani subsp. phaseoli GN=GLN1 PE=2 SV=1 | 1 | 351 | 0.0E+00 |
sp|Q86ZF9|GLNA_NEUCR | Glutamine synthetase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=gln-1 PE=3 SV=1 | 1 | 356 | 0.0E+00 |
sp|Q12613|GLNA_COLGL | Glutamine synthetase OS=Colletotrichum gloeosporioides GN=GLN1 PE=3 SV=1 | 1 | 356 | 0.0E+00 |
sp|Q86ZU6|GLNA_TUBBO | Glutamine synthetase OS=Tuber borchii GN=GLN1 PE=2 SV=1 | 1 | 356 | 3.0E-180 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9C2U9|GLNA_GIBFU | Glutamine synthetase OS=Gibberella fujikuroi GN=GLN1 PE=3 SV=1 | 7 | 351 | 0.0E+00 |
sp|Q9UUN6|GLNA_FUSSH | Glutamine synthetase OS=Fusarium solani subsp. phaseoli GN=GLN1 PE=2 SV=1 | 1 | 351 | 0.0E+00 |
sp|Q86ZF9|GLNA_NEUCR | Glutamine synthetase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=gln-1 PE=3 SV=1 | 1 | 356 | 0.0E+00 |
sp|Q12613|GLNA_COLGL | Glutamine synthetase OS=Colletotrichum gloeosporioides GN=GLN1 PE=3 SV=1 | 1 | 356 | 0.0E+00 |
sp|Q86ZU6|GLNA_TUBBO | Glutamine synthetase OS=Tuber borchii GN=GLN1 PE=2 SV=1 | 1 | 356 | 3.0E-180 |
sp|Q96V52|GLNA_EMENI | Glutamine synthetase OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=glnA PE=3 SV=3 | 9 | 356 | 9.0E-176 |
sp|Q6B4U7|GLNA_DEBHA | Glutamine synthetase OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=GLN1 PE=3 SV=1 | 7 | 356 | 1.0E-174 |
sp|Q75BT9|GLNA_ASHGO | Glutamine synthetase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=GLN1 PE=3 SV=1 | 7 | 356 | 2.0E-172 |
sp|Q6C3E0|GLNA_YARLI | Glutamine synthetase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=GLN1 PE=3 SV=1 | 13 | 356 | 4.0E-172 |
sp|Q874T6|GLNA_KLULA | Glutamine synthetase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=GLN1 PE=3 SV=1 | 1 | 356 | 1.0E-171 |
sp|P32288|GLNA_YEAST | Glutamine synthetase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GLN1 PE=1 SV=4 | 5 | 356 | 2.0E-169 |
sp|Q6FMT6|GLNA_CANGA | Glutamine synthetase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=GLN1 PE=3 SV=1 | 10 | 356 | 3.0E-168 |
sp|P0CN84|GLNA_CRYNJ | Glutamine synthetase OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=GLN1 PE=2 SV=1 | 3 | 353 | 2.0E-167 |
sp|P0CN85|GLNA_CRYNB | Glutamine synthetase OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=GLN1 PE=3 SV=1 | 3 | 353 | 2.0E-167 |
sp|O00088|GLNA_AGABI | Glutamine synthetase OS=Agaricus bisporus GN=glnA PE=3 SV=1 | 17 | 357 | 5.0E-166 |
sp|Q8X169|GLNA_AMAMU | Glutamine synthetase OS=Amanita muscaria GN=GLN1 PE=2 SV=2 | 17 | 357 | 7.0E-165 |
sp|Q96UV5|GLNA_HEBCY | Glutamine synthetase OS=Hebeloma cylindrosporum GN=GLN1 PE=2 SV=1 | 17 | 355 | 1.0E-163 |
sp|Q09179|GLNA_SCHPO | Glutamine synthetase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gln1 PE=1 SV=2 | 5 | 355 | 4.0E-163 |
sp|Q8J1R3|GLNA_SUIBO | Glutamine synthetase OS=Suillus bovinus GN=GLNA PE=3 SV=1 | 11 | 357 | 2.0E-160 |
sp|P16580|GLNA_CHICK | Glutamine synthetase OS=Gallus gallus GN=GLUL PE=1 SV=1 | 17 | 355 | 3.0E-150 |
sp|P15104|GLNA_HUMAN | Glutamine synthetase OS=Homo sapiens GN=GLUL PE=1 SV=4 | 17 | 355 | 8.0E-148 |
sp|Q9QY94|GLNA_ACOCA | Glutamine synthetase OS=Acomys cahirinus GN=GLUL PE=2 SV=3 | 17 | 355 | 9.0E-148 |
sp|P15103|GLNA_BOVIN | Glutamine synthetase OS=Bos taurus GN=GLUL PE=2 SV=4 | 17 | 355 | 1.0E-147 |
sp|Q8HZM5|GLNA_CANLF | Glutamine synthetase OS=Canis lupus familiaris GN=GLUL PE=1 SV=3 | 17 | 355 | 1.0E-147 |
sp|P46410|GLNA_PIG | Glutamine synthetase OS=Sus scrofa GN=GLUL PE=2 SV=3 | 17 | 355 | 4.0E-147 |
sp|P15105|GLNA_MOUSE | Glutamine synthetase OS=Mus musculus GN=Glul PE=1 SV=6 | 17 | 355 | 4.0E-147 |
sp|P51121|GLNA_XENLA | Glutamine synthetase OS=Xenopus laevis GN=glul PE=2 SV=1 | 16 | 355 | 1.0E-146 |
sp|P41320|GLNA_SQUAC | Glutamine synthetase, mitochondrial OS=Squalus acanthias PE=2 SV=1 | 17 | 355 | 3.0E-146 |
sp|Q4R7U3|GLNA_MACFA | Glutamine synthetase OS=Macaca fascicularis GN=GLUL PE=2 SV=3 | 17 | 355 | 5.0E-146 |
sp|P09606|GLNA_RAT | Glutamine synthetase OS=Rattus norvegicus GN=Glul PE=1 SV=3 | 17 | 355 | 9.0E-145 |
sp|P20478|GLNA2_DROME | Glutamine synthetase 2 cytoplasmic OS=Drosophila melanogaster GN=Gs2 PE=2 SV=3 | 1 | 354 | 4.0E-142 |
sp|Q04831|GLNA_PANAR | Glutamine synthetase OS=Panulirus argus PE=2 SV=1 | 13 | 354 | 3.0E-137 |
sp|P14656|GLN11_ORYSJ | Glutamine synthetase cytosolic isozyme 1-1 OS=Oryza sativa subsp. japonica GN=GLN1-1 PE=1 SV=1 | 7 | 358 | 8.0E-137 |
sp|Q43127|GLNA2_ARATH | Glutamine synthetase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=GLN2 PE=1 SV=1 | 7 | 358 | 1.0E-135 |
sp|P14655|GLNA2_ORYSJ | Glutamine synthetase, chloroplastic OS=Oryza sativa subsp. japonica GN=GLN2 PE=1 SV=1 | 6 | 358 | 4.0E-134 |
sp|O22504|GLNA1_DAUCA | Glutamine synthetase cytosolic isozyme OS=Daucus carota GN=GLN1 PE=2 SV=1 | 7 | 350 | 5.0E-134 |
sp|Q9LVI8|GLN13_ARATH | Glutamine synthetase cytosolic isozyme 1-3 OS=Arabidopsis thaliana GN=GLN1-3 PE=1 SV=1 | 7 | 356 | 6.0E-134 |
sp|P04773|GLNA_CRIGR | Glutamine synthetase OS=Cricetulus griseus GN=GLUL PE=2 SV=4 | 17 | 355 | 7.0E-134 |
sp|Q42624|GLNAC_BRANA | Glutamine synthetase, chloroplastic OS=Brassica napus GN=GLN2 PE=2 SV=1 | 6 | 358 | 3.0E-133 |
sp|P38561|GLNA3_MAIZE | Glutamine synthetase root isozyme 3 OS=Zea mays GN=GLN4 PE=1 SV=1 | 7 | 358 | 2.0E-132 |
sp|P34497|GLNA_CAEEL | Probable glutamine synthetase OS=Caenorhabditis elegans GN=gln-2 PE=3 SV=1 | 11 | 355 | 9.0E-132 |
sp|Q56WN1|GLN11_ARATH | Glutamine synthetase cytosolic isozyme 1-1 OS=Arabidopsis thaliana GN=GLN1-1 PE=1 SV=2 | 7 | 358 | 2.0E-131 |
sp|P13564|GLNA2_HORVU | Glutamine synthetase leaf isozyme, chloroplastic OS=Hordeum vulgare PE=2 SV=2 | 26 | 358 | 4.0E-131 |
sp|P00965|GLNA3_PHAVU | Glutamine synthetase N-1 OS=Phaseolus vulgaris GN=Gln-gamma PE=2 SV=2 | 7 | 358 | 6.0E-131 |
sp|P51119|GLNA2_VITVI | Glutamine synthetase cytosolic isozyme 2 OS=Vitis vinifera GN=GS1-2 PE=2 SV=1 | 21 | 358 | 9.0E-131 |
sp|Q9XQ94|GLNA2_MEDSA | Glutamine synthetase leaf isozyme, chloroplastic OS=Medicago sativa GN=GS2 PE=2 SV=1 | 2 | 355 | 1.0E-130 |
sp|P32289|GLNA_VIGAC | Glutamine synthetase nodule isozyme OS=Vigna aconitifolia PE=2 SV=1 | 7 | 358 | 2.0E-130 |
sp|O82560|GLNA2_SOYBN | Glutamine synthetase cytosolic isozyme 2 OS=Glycine max PE=1 SV=1 | 7 | 358 | 4.0E-130 |
sp|P15102|GLNA4_PHAVU | Glutamine synthetase leaf isozyme, chloroplastic OS=Phaseolus vulgaris PE=2 SV=1 | 26 | 355 | 6.0E-130 |
sp|Q42688|GLNA1_CHLRE | Glutamine synthetase cytosolic isozyme OS=Chlamydomonas reinhardtii GN=GLN1 PE=2 SV=1 | 21 | 355 | 6.0E-130 |
sp|P25462|GLNAC_MAIZE | Glutamine synthetase, chloroplastic OS=Zea mays GN=GLN2 PE=2 SV=1 | 26 | 358 | 7.0E-130 |
sp|P20477|GLNA1_DROME | Glutamine synthetase 1, mitochondrial OS=Drosophila melanogaster GN=Gs1 PE=2 SV=3 | 14 | 355 | 8.0E-130 |
sp|P38563|GLNA5_MAIZE | Glutamine synthetase root isozyme 5 OS=Zea mays GN=GS1-5 PE=2 SV=2 | 7 | 357 | 8.0E-130 |
sp|Q42899|GLNA1_LOTJA | Glutamine synthetase cytosolic isozyme OS=Lotus japonicus GN=GLN1 PE=2 SV=2 | 26 | 358 | 9.0E-130 |
sp|P52782|GLNA_LUPLU | Glutamine synthetase nodule isozyme OS=Lupinus luteus PE=3 SV=1 | 7 | 355 | 9.0E-130 |
sp|P04770|GLNA1_PHAVU | Glutamine synthetase PR-1 OS=Phaseolus vulgaris PE=2 SV=1 | 7 | 358 | 2.0E-129 |
sp|O22506|GLNA2_DAUCA | Glutamine synthetase, chloroplastic OS=Daucus carota GN=GLN2 PE=2 SV=1 | 26 | 358 | 2.0E-129 |
sp|P04078|GLNA1_MEDSA | Glutamine synthetase cytosolic isozyme OS=Medicago sativa PE=2 SV=1 | 26 | 358 | 2.0E-129 |
sp|Q43785|GLNA3_MEDSA | Glutamine synthetase nodule isozyme OS=Medicago sativa GN=GS1 PE=2 SV=1 | 26 | 358 | 3.0E-129 |
sp|P12424|GLNA_NICPL | Glutamine synthetase OS=Nicotiana plumbaginifolia PE=2 SV=1 | 7 | 357 | 3.0E-129 |
sp|Q9FMD9|GLN14_ARATH | Glutamine synthetase cytosolic isozyme 1-4 OS=Arabidopsis thaliana GN=GLN1-4 PE=1 SV=1 | 7 | 358 | 4.0E-129 |
sp|P07694|GLNA3_PEA | Glutamine synthetase root isozyme A OS=Pisum sativum GN=GS3A PE=2 SV=1 | 7 | 358 | 6.0E-129 |
sp|Q43066|GLNA4_PEA | Glutamine synthetase root isozyme B OS=Pisum sativum GN=GS3B PE=3 SV=1 | 7 | 357 | 1.0E-128 |
sp|Q06378|GLNA3_HORVU | Glutamine synthetase OS=Hordeum vulgare PE=2 SV=1 | 26 | 358 | 2.0E-128 |
sp|P51118|GLNA1_VITVI | Glutamine synthetase cytosolic isozyme 1 OS=Vitis vinifera GN=GS1-1 PE=2 SV=1 | 26 | 358 | 2.0E-128 |
sp|P04771|GLNA2_PHAVU | Glutamine synthetase PR-2 OS=Phaseolus vulgaris PE=2 SV=1 | 26 | 358 | 2.0E-128 |
sp|P38559|GLNA1_MAIZE | Glutamine synthetase root isozyme 1 OS=Zea mays GN=GLN6 PE=2 SV=1 | 7 | 355 | 3.0E-128 |
sp|P08281|GLNA2_PEA | Glutamine synthetase leaf isozyme, chloroplastic OS=Pisum sativum GN=GS2 PE=2 SV=2 | 25 | 355 | 3.0E-128 |
sp|P38562|GLNA4_MAIZE | Glutamine synthetase root isozyme 4 OS=Zea mays GN=GLN5 PE=2 SV=1 | 7 | 358 | 4.0E-128 |
sp|Q4W8D0|GLN13_ORYSJ | Glutamine synthetase cytosolic isozyme 1-3 OS=Oryza sativa subsp. japonica GN=GLN1-3 PE=2 SV=1 | 8 | 358 | 9.0E-128 |
sp|P14654|GLN12_ORYSJ | Glutamine synthetase cytosolic isozyme 1-2 OS=Oryza sativa subsp. japonica GN=GLN1-2 PE=1 SV=1 | 7 | 355 | 2.0E-127 |
sp|P23712|GLNA_LACSA | Glutamine synthetase OS=Lactuca sativa PE=2 SV=2 | 26 | 350 | 4.0E-127 |
sp|O04867|GLNA1_ALNGL | Glutamine synthetase OS=Alnus glutinosa GN=GLN1 PE=2 SV=1 | 7 | 358 | 7.0E-127 |
sp|Q8GXW5|GLN15_ARATH | Glutamine synthetase cytosolic isozyme 1-5 OS=Arabidopsis thaliana GN=GLN1-5 PE=1 SV=1 | 26 | 355 | 1.0E-126 |
sp|P08282|GLNA1_PEA | Glutamine synthetase nodule isozyme OS=Pisum sativum GN=GS1 PE=2 SV=2 | 13 | 358 | 3.0E-126 |
sp|Q8LCE1|GLN12_ARATH | Glutamine synthetase cytosolic isozyme 1-2 OS=Arabidopsis thaliana GN=GLN1-2 PE=1 SV=2 | 21 | 355 | 4.0E-126 |
sp|P52783|GLNA_PINSY | Glutamine synthetase cytosolic isozyme OS=Pinus sylvestris PE=2 SV=1 | 21 | 358 | 2.0E-125 |
sp|P24099|GLNA1_SOYBN | Glutamine synthetase cytosolic isozyme 1 OS=Glycine max PE=2 SV=1 | 7 | 358 | 1.0E-124 |
sp|P38560|GLNA2_MAIZE | Glutamine synthetase root isozyme 2 OS=Zea mays GN=GLN2 PE=2 SV=1 | 22 | 358 | 3.0E-122 |
sp|Q5UR44|GLNA_MIMIV | Putative glutamine synthetase OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R565 PE=3 SV=1 | 21 | 354 | 1.0E-115 |
sp|P14636|GLNA3_LUPAN | Glutamine synthetase nodule isozyme (Fragment) OS=Lupinus angustifolius PE=2 SV=1 | 7 | 318 | 3.0E-113 |
sp|P19432|GLNA2_STRVR | Glutamine synthetase 2 OS=Streptomyces viridochromogenes GN=glnII PE=3 SV=1 | 25 | 353 | 3.0E-111 |
sp|Q42689|GLNA2_CHLRE | Glutamine synthetase, chloroplastic OS=Chlamydomonas reinhardtii GN=GLN2 PE=2 SV=1 | 8 | 355 | 3.0E-110 |
sp|P20805|GLNA2_FRAAL | Glutamine synthetase 2 OS=Frankia alni GN=glnII PE=2 SV=1 | 25 | 353 | 2.0E-100 |
sp|P22878|GLNA2_STRHY | Glutamine synthetase 2 OS=Streptomyces hygroscopicus GN=glnB PE=3 SV=1 | 25 | 353 | 7.0E-99 |
sp|P04772|GLNA2_BRADU | Glutamine synthetase 2 OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN=glnII PE=3 SV=2 | 29 | 358 | 5.0E-92 |
sp|P11600|GLNA_DUNSA | Glutamine synthetase (Fragment) OS=Dunaliella salina PE=2 SV=1 | 128 | 355 | 5.0E-85 |
sp|Q02154|GLNA2_RHILP | Glutamine synthetase 2 OS=Rhizobium leguminosarum bv. phaseoli GN=glnII PE=1 SV=3 | 29 | 348 | 5.0E-83 |
sp|P45626|GLNA2_RHIML | Glutamine synthetase 2 OS=Rhizobium meliloti GN=glnII PE=3 SV=1 | 29 | 346 | 4.0E-81 |
sp|Q9ZLW5|GLNA_HELPJ | Glutamine synthetase OS=Helicobacter pylori (strain J99 / ATCC 700824) GN=glnA PE=3 SV=1 | 61 | 356 | 2.0E-09 |
sp|P94845|GLNA_HELPY | Glutamine synthetase OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=glnA PE=3 SV=2 | 61 | 353 | 4.0E-09 |
sp|P9WN37|GLNA2_MYCTU | Probable glutamine synthetase 2 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=glnA2 PE=1 SV=1 | 181 | 353 | 1.0E-07 |
sp|P9WN36|GLNA2_MYCTO | Probable glutamine synthetase 2 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=glnA2 PE=3 SV=1 | 181 | 353 | 1.0E-07 |
sp|P64246|GLNA2_MYCBO | Probable glutamine synthetase 2 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=glnA2 PE=3 SV=1 | 181 | 353 | 1.0E-07 |
sp|O27612|GLNA_METTH | Glutamine synthetase OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=glnA PE=3 SV=1 | 61 | 353 | 5.0E-07 |
sp|A0R083|GLNA2_MYCS2 | Probable glutamine synthetase 2 OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=glnA PE=1 SV=1 | 186 | 353 | 1.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0004356 | glutamate-ammonia ligase activity | Yes |
GO:0006807 | nitrogen compound metabolic process | Yes |
GO:0006542 | glutamine biosynthetic process | Yes |
GO:0043436 | oxoacid metabolic process | No |
GO:0003674 | molecular_function | No |
GO:0044237 | cellular metabolic process | No |
GO:0008152 | metabolic process | No |
GO:0044283 | small molecule biosynthetic process | No |
GO:0006541 | glutamine metabolic process | No |
GO:1901576 | organic substance biosynthetic process | No |
GO:0071704 | organic substance metabolic process | No |
GO:0044238 | primary metabolic process | No |
GO:1901566 | organonitrogen compound biosynthetic process | No |
GO:0046394 | carboxylic acid biosynthetic process | No |
GO:1901564 | organonitrogen compound metabolic process | No |
GO:0008652 | cellular amino acid biosynthetic process | No |
GO:0008150 | biological_process | No |
GO:0044281 | small molecule metabolic process | No |
GO:0016879 | ligase activity, forming carbon-nitrogen bonds | No |
GO:0006520 | cellular amino acid metabolic process | No |
GO:0006082 | organic acid metabolic process | No |
GO:0009987 | cellular process | No |
GO:0016874 | ligase activity | No |
GO:0019752 | carboxylic acid metabolic process | No |
GO:1901607 | alpha-amino acid biosynthetic process | No |
GO:0016053 | organic acid biosynthetic process | No |
GO:0016211 | ammonia ligase activity | No |
GO:0009084 | glutamine family amino acid biosynthetic process | No |
GO:0016880 | acid-ammonia (or amide) ligase activity | No |
GO:0003824 | catalytic activity | No |
GO:1901605 | alpha-amino acid metabolic process | No |
GO:0044249 | cellular biosynthetic process | No |
GO:0009058 | biosynthetic process | No |
GO:0009064 | glutamine family amino acid metabolic process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 55 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 468.30 | 214.08 | 722.52 |
CcL | In ants, during behavior modification | 18808.80 | 0.00 | 64462.00 |
CcD | In ants, recently dead | 9325.34 | 537.93 | 18112.80 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.359904 | no |
SC16a | CcD | 0.000286 | yes |
CcL | CcD | 0.540070 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|4459 MASREVLSSRTETVNKYMKLDQKGSLMAEYVWIDADGEVRSKSRTLDEQKYKPEDLPIWNFDGSSTKQAPGENSD VYLRPCAVFPDPFRGAPNIIVLTECWNADGTPNKYNYRHECDKVMKAYASHVPWFGLEQEYTFLGHDDRPYGWPT NGYPAPQGPYYCGVGSGKVVMRDVVESHYKACLYAGVKISGTNAEVMPGQWEFQVGPCEGIQMGDHLWVARFFLA RVAEDFGVKVSWHPKPIGGDWNGAGLHSNFSTKEMRNEGGMKFIEEALKKLEPHHMDCIKEYGEDNDKRLTGLHE TGSIEKFTYGVANRGTSIRIPRETAAKGSGYFEDRRPASNADPYRVTKVLMTSIFGKP |
Coding | >Ophio5|4459 ATGGCTAGTCGCGAAGTCCTTTCCTCTCGTACAGAGACGGTCAATAAATACATGAAGCTCGATCAAAAGGGCTCT CTTATGGCCGAGTATGTCTGGATTGATGCCGACGGCGAGGTTCGCTCCAAGTCTCGCACACTCGACGAGCAAAAA TACAAGCCCGAAGACCTGCCCATCTGGAACTTTGACGGCTCCTCCACTAAGCAGGCCCCTGGCGAAAACTCTGAT GTCTACCTCCGCCCCTGCGCCGTCTTCCCGGATCCCTTCCGCGGCGCGCCCAACATTATCGTACTCACCGAGTGC TGGAACGCCGACGGCACCCCTAACAAGTACAATTACCGACACGAGTGCGACAAGGTCATGAAGGCTTATGCAAGC CATGTCCCTTGGTTTGGCCTCGAGCAAGAGTACACTTTCCTGGGCCACGATGATCGGCCCTATGGCTGGCCTACC AATGGATACCCTGCTCCCCAAGGGCCCTACTACTGTGGTGTCGGCAGCGGCAAAGTCGTCATGCGCGACGTCGTC GAGTCGCATTACAAAGCTTGTTTGTATGCCGGTGTCAAGATTTCAGGAACCAACGCCGAGGTTATGCCCGGTCAA TGGGAGTTTCAGGTCGGCCCTTGCGAGGGCATCCAAATGGGTGATCATCTCTGGGTTGCCCGATTCTTCCTGGCC CGTGTCGCCGAAGATTTCGGCGTCAAGGTGTCGTGGCACCCGAAGCCCATCGGCGGCGACTGGAACGGCGCCGGC CTGCACTCCAACTTCTCCACCAAGGAGATGCGCAACGAGGGCGGCATGAAGTTCATCGAGGAGGCGCTCAAGAAG TTGGAGCCGCACCACATGGATTGCATCAAGGAGTACGGCGAAGATAACGATAAGCGCCTTACCGGCCTCCACGAG ACGGGCTCCATCGAAAAGTTCACCTACGGCGTGGCAAACCGCGGAACCTCGATTCGGATCCCTCGCGAGACGGCC GCCAAGGGTTCCGGCTACTTCGAAGACCGACGTCCAGCGTCCAACGCGGACCCTTATCGTGTCACCAAGGTGCTC ATGACGTCCATCTTCGGCAAGCCA |
Transcript | >Ophio5|4459 ATGGCTAGTCGCGAAGTCCTTTCCTCTCGTACAGAGACGGTCAATAAATACATGAAGCTCGATCAAAAGGGCTCT CTTATGGCCGAGTATGTCTGGATTGATGCCGACGGCGAGGTTCGCTCCAAGTCTCGCACACTCGACGAGCAAAAA TACAAGCCCGAAGACCTGCCCATCTGGAACTTTGACGGCTCCTCCACTAAGCAGGCCCCTGGCGAAAACTCTGAT GTCTACCTCCGCCCCTGCGCCGTCTTCCCGGATCCCTTCCGCGGCGCGCCCAACATTATCGTACTCACCGAGTGC TGGAACGCCGACGGCACCCCTAACAAGTACAATTACCGACACGAGTGCGACAAGGTCATGAAGGCTTATGCAAGC CATGTCCCTTGGTTTGGCCTCGAGCAAGAGTACACTTTCCTGGGCCACGATGATCGGCCCTATGGCTGGCCTACC AATGGATACCCTGCTCCCCAAGGGCCCTACTACTGTGGTGTCGGCAGCGGCAAAGTCGTCATGCGCGACGTCGTC GAGTCGCATTACAAAGCTTGTTTGTATGCCGGTGTCAAGATTTCAGGAACCAACGCCGAGGTTATGCCCGGTCAA TGGGAGTTTCAGGTCGGCCCTTGCGAGGGCATCCAAATGGGTGATCATCTCTGGGTTGCCCGATTCTTCCTGGCC CGTGTCGCCGAAGATTTCGGCGTCAAGGTGTCGTGGCACCCGAAGCCCATCGGCGGCGACTGGAACGGCGCCGGC CTGCACTCCAACTTCTCCACCAAGGAGATGCGCAACGAGGGCGGCATGAAGTTCATCGAGGAGGCGCTCAAGAAG TTGGAGCCGCACCACATGGATTGCATCAAGGAGTACGGCGAAGATAACGATAAGCGCCTTACCGGCCTCCACGAG ACGGGCTCCATCGAAAAGTTCACCTACGGCGTGGCAAACCGCGGAACCTCGATTCGGATCCCTCGCGAGACGGCC GCCAAGGGTTCCGGCTACTTCGAAGACCGACGTCCAGCGTCCAACGCGGACCCTTATCGTGTCACCAAGGTGCTC ATGACGTCCATCTTCGGCAAGCCATGA |
Gene | >Ophio5|4459 ATGGTAGGATGACCCTGCTGTCTGCCTTTCTTCCAACTAACAACTGCTAACCGGCCGTTTCTTCGCTCGCAGGCT AGTCGCGAAGTCCTTTCCTCTCGTACAGAGACGGTATGTGTTGCAACTCGCCCAAAGCCGCCTACGACCGAGGCT GACGATACTCCACAGGTCAATAAATACATGAAGCTCGATCAAAAGGGCTCTCTTATGGCCGAGTATGTCTGGATT GATGCCGACGGCGAGGTTCGCTCCAAGTCTCGCGTGAGTCTCTCTCTCTCTCACTCACTTCCTCTCTTCCACTTC TGGTCTCGCCGCCTGTCGCACGCCGGAGACCACATCCACGCCGTGCGCCGTCGCTTCGTCGTCGACGGCCCCGCT CCCGGCATACCCTGACCAATCGCACCGTCTCTCACTGTCATCCATTCCTTCTCTGCACTGCACCCTTCCGATGGC GACGCTACTATATCCATACAACCCTCTGCTGACACGCTGCTGCAGACACTCGACGAGCAAAAATACAAGCCCGAA GACCTGCCCATCTGGAACTTTGACGGCTCCTCCACTAAGCAGGCCCCTGGCGAAAACTCTGATGTCTACCTCCGC CCCTGCGCCGTCTTCCCGGATCCCTTCCGCGGCGCGCCCAACATTATCGTACTCACCGAGTGCTGGAACGCCGAC GGCACCCCTAACAAGTACAATTACCGACACGAGTGCGACAAGGTCATGAAGGCTTATGCAAGCCATGTCCCTTGG TTTGGCCTCGAGCAAGAGTACACTTTCCTGGGCCACGATGATCGGCCCTATGGCTGGCCTACCAATGGATACCCT GCTCCGTAAGCCACATCGTCGTCTTGCATTAGCCTCGGCTCGCTGACCCCCTGTCCAGCCAAGGGCCCTACTACT GTGGTGTCGGCAGCGGCAAAGTCGTCATGCGCGACGTCGTCGAGTCGCATTACAAAGCTTGTTTGTGTATGTTGC CCGGCGTCGTCGTCGTCATCGTGCTTCCATTTTGCTGACGCGAGTGACCAGATGCCGGTGTCAAGATTTCAGGAA CCAACGCCGAGGTTATGCCCGGTCAATGGGAGTTTCAGGTCGGCCCTTGCGAGGGCATCCAAAGTGCGTACTGTT CTGCCGCCCCCACCAACACGCATGGTAAAGCATGACTGACGTCAGTGCGCAGTGGGTGATCATCTCTGGGTTGCC CGATTCTTCCTGGCCCGTGTCGCCGAAGATTTCGGCGTCAAGGTGTCGTGGCACCCGAAGCCCATCGGCGGCGAC TGGAACGGCGCCGGCCTGCACTCCAACTTCTCCACCAAGGAGATGCGCAACGAGGGCGGCATGAAGTTCATCGAG GAGGCGCTCAAGAAGTTGGAGCCGCACCACATGGATTGCATCAAGGAGTACGGCGAAGATAACGATAAGCGCCTT ACCGGCCTCCACGAGACGGGCTCCATCGAAAAGTTCACCTACGGCGTGGCAAACCGCGGAACCTCGATTCGGATC CCTCGCGAGACGGCCGCCAAGGGTTCCGGCTACTTCGAAGACCGACGTCCAGCGTCCAACGCGGACCCTTATCGT GTCACCAAGGTGCTCATGACGTCCATCTTCGGCAAGCCATGA |