Protein ID | Ophio5|4456 |
Gene name | |
Location | scaffold_353:7207..9190 |
Strand | - |
Gene length (bp) | 1983 |
Transcript length (bp) | 1917 |
Coding sequence length (bp) | 1914 |
Protein length (aa) | 638 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11559 | ADIP | Afadin- and alpha -actinin-Binding | 7.7E-35 | 9 | 164 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 23 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|4456 MIDTASLHTASLYINNQLLSRGLLRDGQPIDFAHVENGGPGTAGETAGRIISIVNDLILRRDRDAQHLESLSAAM RSLRAENAKLTSDLARLSEKKAEERRQAAMASAAEATARSQLRTAEANTRSLKEDVTRMKALVSQTRSACATEVR RRDRQNDALKKQLVEAGRWRGAKTNSFVTTIHVTESSSEEKDELPPAMSTSSEGYDLRSETNAFLAKLAQELSEE NEFVLEVMRRTASQLRNMSGYDGGRREEAVVATRRLGCEELSAELEAVMTHMRTILTNPSFVPIEEVVLREEEID RLKAGWLKMESRWKEAVQLLDGWRKRMAASGRLVCDDDDELRLGLGRLSPERIKEEVGVKGGELETLAEEEEEEA GDEQEEAGDDDNTVERWSSSGLSGGAELGGDEEHLVDASNANKDEDEDEDEDDFVENWRVEQVSLGPHRQPSPPP SSSSPPLPSPPQLSPLRTSSSAGKRGSLQNRRLRPRPTPPTPRPRSPSRTSLDDVLLGGNNNNNNNNNKTKTSIA TKLAASERDADAARLRAKLEAARKKGGGRDRGVVRPVIEEPSSSSSSLSSPSSSSIVVRPDVDKRMMVMPSDHGS VKAESLKRVKRGRKVVSRRRSTLSPLELEALLAGGHAT |
Coding | >Ophio5|4456 ATGATCGATACGGCAAGCCTGCACACGGCATCGCTGTACATCAACAACCAGCTCCTCTCGCGAGGCCTGCTGCGG GATGGACAGCCCATCGACTTTGCACACGTCGAGAACGGCGGTCCAGGGACGGCGGGGGAGACAGCCGGACGAATC ATCAGCATCGTCAATGACCTGATATTGCGGCGCGACCGCGACGCTCAACACCTTGAATCACTATCGGCAGCGATG CGGAGCCTCCGAGCGGAAAACGCCAAGCTCACGAGCGACTTGGCGCGACTCTCGGAAAAGAAGGCCGAGGAGCGG CGCCAAGCGGCCATGGCGAGCGCAGCCGAGGCGACAGCCCGATCGCAACTCCGGACAGCAGAGGCCAACACGCGC AGCCTCAAGGAGGATGTGACGCGGATGAAGGCCCTGGTGTCACAGACGCGATCCGCCTGCGCGACCGAGGTGCGA CGGCGCGACCGACAGAACGACGCGCTGAAGAAGCAACTCGTCGAGGCCGGACGATGGCGAGGAGCCAAGACGAAC TCATTCGTGACGACGATTCATGTCACGGAGTCGAGCTCGGAGGAAAAAGACGAGCTTCCCCCGGCGATGAGCACG AGCTCGGAAGGATACGACCTACGCAGCGAGACGAATGCCTTTCTAGCGAAGCTGGCGCAAGAGCTGAGCGAGGAG AACGAGTTCGTTCTGGAAGTGATGCGTCGCACGGCGTCCCAGCTGCGCAACATGAGCGGCTACGATGGCGGTCGT CGGGAGGAAGCTGTCGTGGCGACGCGACGACTGGGCTGCGAAGAGCTATCGGCCGAGCTGGAAGCCGTCATGACT CACATGCGCACCATCCTGACGAACCCGTCGTTTGTGCCCATCGAGGAAGTGGTGCTGCGCGAGGAGGAGATTGAC AGACTCAAGGCTGGCTGGCTCAAGATGGAGAGCCGATGGAAGGAGGCGGTGCAGCTGCTCGACGGTTGGAGGAAG CGCATGGCGGCTAGTGGCCGGCTGGTATGCGACGATGATGACGAGCTGAGGCTGGGCTTGGGGCGCTTGAGTCCG GAGAGGATCAAGGAGGAAGTTGGTGTTAAGGGGGGCGAGCTCGAGACGCTGGCCGAGGAAGAGGAAGAAGAGGCC GGTGATGAGCAGGAGGAGGCCGGTGATGATGACAATACAGTGGAGAGATGGTCATCGTCTGGACTCAGCGGGGGG GCAGAGCTGGGAGGAGACGAGGAGCACCTCGTCGACGCAAGCAACGCCAACAAAGACGAAGACGAAGACGAAGAC GAAGACGACTTTGTCGAAAACTGGCGCGTCGAACAGGTCAGCCTCGGCCCACACCGACAACCCTCACCACCTCCC TCCTCCTCCTCACCACCACTCCCGTCCCCGCCCCAACTCAGCCCCCTCCGGACCTCCAGCTCAGCAGGAAAGCGC GGCTCGCTCCAGAACCGCCGACTCCGACCACGACCGACGCCGCCGACGCCGCGTCCTCGCTCTCCTTCTCGCACC TCTCTCGACGACGTTCTCCTCGGCGGCAACAACAACAACAACAACAACAACAACAAGACAAAGACCAGCATCGCC ACCAAGCTCGCCGCATCGGAACGCGATGCTGACGCCGCCAGGCTAAGGGCCAAGTTGGAGGCGGCGAGGAAGAAG GGGGGGGGTAGGGACCGCGGGGTTGTGAGACCTGTGATCGAGGAGCCTTCTTCTTCCTCTTCTTCTTTGTCCTCG CCCTCGTCCTCGTCTATTGTTGTTCGTCCTGACGTTGACAAGAGGATGATGGTGATGCCTTCTGATCATGGTTCG GTCAAGGCTGAGTCGCTGAAGCGCGTGAAGCGTGGTCGCAAGGTTGTCTCGCGCAGGAGGAGTACTCTTAGCCCG CTCGAGCTCGAGGCTTTGCTGGCGGGTGGCCATGCGACA |
Transcript | >Ophio5|4456 ATGATCGATACGGCAAGCCTGCACACGGCATCGCTGTACATCAACAACCAGCTCCTCTCGCGAGGCCTGCTGCGG GATGGACAGCCCATCGACTTTGCACACGTCGAGAACGGCGGTCCAGGGACGGCGGGGGAGACAGCCGGACGAATC ATCAGCATCGTCAATGACCTGATATTGCGGCGCGACCGCGACGCTCAACACCTTGAATCACTATCGGCAGCGATG CGGAGCCTCCGAGCGGAAAACGCCAAGCTCACGAGCGACTTGGCGCGACTCTCGGAAAAGAAGGCCGAGGAGCGG CGCCAAGCGGCCATGGCGAGCGCAGCCGAGGCGACAGCCCGATCGCAACTCCGGACAGCAGAGGCCAACACGCGC AGCCTCAAGGAGGATGTGACGCGGATGAAGGCCCTGGTGTCACAGACGCGATCCGCCTGCGCGACCGAGGTGCGA CGGCGCGACCGACAGAACGACGCGCTGAAGAAGCAACTCGTCGAGGCCGGACGATGGCGAGGAGCCAAGACGAAC TCATTCGTGACGACGATTCATGTCACGGAGTCGAGCTCGGAGGAAAAAGACGAGCTTCCCCCGGCGATGAGCACG AGCTCGGAAGGATACGACCTACGCAGCGAGACGAATGCCTTTCTAGCGAAGCTGGCGCAAGAGCTGAGCGAGGAG AACGAGTTCGTTCTGGAAGTGATGCGTCGCACGGCGTCCCAGCTGCGCAACATGAGCGGCTACGATGGCGGTCGT CGGGAGGAAGCTGTCGTGGCGACGCGACGACTGGGCTGCGAAGAGCTATCGGCCGAGCTGGAAGCCGTCATGACT CACATGCGCACCATCCTGACGAACCCGTCGTTTGTGCCCATCGAGGAAGTGGTGCTGCGCGAGGAGGAGATTGAC AGACTCAAGGCTGGCTGGCTCAAGATGGAGAGCCGATGGAAGGAGGCGGTGCAGCTGCTCGACGGTTGGAGGAAG CGCATGGCGGCTAGTGGCCGGCTGGTATGCGACGATGATGACGAGCTGAGGCTGGGCTTGGGGCGCTTGAGTCCG GAGAGGATCAAGGAGGAAGTTGGTGTTAAGGGGGGCGAGCTCGAGACGCTGGCCGAGGAAGAGGAAGAAGAGGCC GGTGATGAGCAGGAGGAGGCCGGTGATGATGACAATACAGTGGAGAGATGGTCATCGTCTGGACTCAGCGGGGGG GCAGAGCTGGGAGGAGACGAGGAGCACCTCGTCGACGCAAGCAACGCCAACAAAGACGAAGACGAAGACGAAGAC GAAGACGACTTTGTCGAAAACTGGCGCGTCGAACAGGTCAGCCTCGGCCCACACCGACAACCCTCACCACCTCCC TCCTCCTCCTCACCACCACTCCCGTCCCCGCCCCAACTCAGCCCCCTCCGGACCTCCAGCTCAGCAGGAAAGCGC GGCTCGCTCCAGAACCGCCGACTCCGACCACGACCGACGCCGCCGACGCCGCGTCCTCGCTCTCCTTCTCGCACC TCTCTCGACGACGTTCTCCTCGGCGGCAACAACAACAACAACAACAACAACAACAAGACAAAGACCAGCATCGCC ACCAAGCTCGCCGCATCGGAACGCGATGCTGACGCCGCCAGGCTAAGGGCCAAGTTGGAGGCGGCGAGGAAGAAG GGGGGGGGTAGGGACCGCGGGGTTGTGAGACCTGTGATCGAGGAGCCTTCTTCTTCCTCTTCTTCTTTGTCCTCG CCCTCGTCCTCGTCTATTGTTGTTCGTCCTGACGTTGACAAGAGGATGATGGTGATGCCTTCTGATCATGGTTCG GTCAAGGCTGAGTCGCTGAAGCGCGTGAAGCGTGGTCGCAAGGTTGTCTCGCGCAGGAGGAGTACTCTTAGCCCG CTCGAGCTCGAGGCTTTGCTGGCGGGTGGCCATGCGACATGA |
Gene | >Ophio5|4456 ATGATCGATACGGCAAGCCTGCACACGGCATCGCTGTACATCAACAACCAGCTCCTCTCGCGAGGCCTGCTGCGG GATGGACAGCCCATCGACTTTGCACACGTCGAGAACGGCGGTCCAGGGACGGCGGGGGAGACAGCCGGACGAATC ATCAGCATCGTCAATGACCTGATATTGCGGCGCGACGTGAGGCTGTCCGCCTGATGATGCCCTCGAGGGGAGCTG AGCTGACGGAAGAGACGGTTGGCACAGCGCGACGCTCAACACCTTGAATCACTATCGGCAGCGATGCGGAGCCTC CGAGCGGAAAACGCCAAGCTCACGAGCGACTTGGCGCGACTCTCGGAAAAGAAGGCCGAGGAGCGGCGCCAAGCG GCCATGGCGAGCGCAGCCGAGGCGACAGCCCGATCGCAACTCCGGACAGCAGAGGCCAACACGCGCAGCCTCAAG GAGGATGTGACGCGGATGAAGGCCCTGGTGTCACAGACGCGATCCGCCTGCGCGACCGAGGTGCGACGGCGCGAC CGACAGAACGACGCGCTGAAGAAGCAACTCGTCGAGGCCGGACGATGGCGAGGAGCCAAGACGAACTCATTCGTG ACGACGATTCATGTCACGGAGTCGAGCTCGGAGGAAAAAGACGAGCTTCCCCCGGCGATGAGCACGAGCTCGGAA GGATACGACCTACGCAGCGAGACGAATGCCTTTCTAGCGAAGCTGGCGCAAGAGCTGAGCGAGGAGAACGAGTTC GTTCTGGAAGTGATGCGTCGCACGGCGTCCCAGCTGCGCAACATGAGCGGCTACGATGGCGGTCGTCGGGAGGAA GCTGTCGTGGCGACGCGACGACTGGGCTGCGAAGAGCTATCGGCCGAGCTGGAAGCCGTCATGACTCACATGCGC ACCATCCTGACGAACCCGTCGTTTGTGCCCATCGAGGAAGTGGTGCTGCGCGAGGAGGAGATTGACAGACTCAAG GCTGGCTGGCTCAAGATGGAGAGCCGATGGAAGGAGGCGGTGCAGCTGCTCGACGGTTGGAGGAAGCGCATGGCG GCTAGTGGCCGGCTGGTATGCGACGATGATGACGAGCTGAGGCTGGGCTTGGGGCGCTTGAGTCCGGAGAGGATC AAGGAGGAAGTTGGTGTTAAGGGGGGCGAGCTCGAGACGCTGGCCGAGGAAGAGGAAGAAGAGGCCGGTGATGAG CAGGAGGAGGCCGGTGATGATGACAATACAGTGGAGAGATGGTCATCGTCTGGACTCAGCGGGGGGGCAGAGCTG GGAGGAGACGAGGAGCACCTCGTCGACGCAAGCAACGCCAACAAAGACGAAGACGAAGACGAAGACGAAGACGAC TTTGTCGAAAACTGGCGCGTCGAACAGGTCAGCCTCGGCCCACACCGACAACCCTCACCACCTCCCTCCTCCTCC TCACCACCACTCCCGTCCCCGCCCCAACTCAGCCCCCTCCGGACCTCCAGCTCAGCAGGAAAGCGCGGCTCGCTC CAGAACCGCCGACTCCGACCACGACCGACGCCGCCGACGCCGCGTCCTCGCTCTCCTTCTCGCACCTCTCTCGAC GACGTTCTCCTCGGCGGCAACAACAACAACAACAACAACAACAACAAGACAAAGACCAGCATCGCCACCAAGCTC GCCGCATCGGAACGCGATGCTGACGCCGCCAGGCTAAGGGCCAAGTTGGAGGCGGCGAGGAAGAAGGGGGGGGGT AGGGACCGCGGGGTTGTGAGACCTGTGATCGAGGAGCCTTCTTCTTCCTCTTCTTCTTTGTCCTCGCCCTCGTCC TCGTCTATTGTTGTTCGTCCTGACGTTGACAAGAGGATGATGGTGATGCCTTCTGATCATGGTTCGGTCAAGGCT GAGTCGCTGAAGCGCGTGAAGCGTGGTCGCAAGGTTGTCTCGCGCAGGAGGAGTACTCTTAGCCCGCTCGAGCTC GAGGCTTTGCTGGCGGGTGGCCATGCGACATGA |