Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4453
Gene name
Locationscaffold_353:1628..2240
Strand-
Gene length (bp)612
Transcript length (bp)558
Coding sequence length (bp)555
Protein length (aa) 185

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05532 CsbD CsbD-like 3.2E-12 79 127

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Mitochondrion 0.3501 0.1814 0.1839 0.155 0.6531 0.0986 0.4616 0.0993 0.3522 0.1043

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup5701
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4536
Ophiocordyceps camponoti-floridani Ophcf2|00767
Ophiocordyceps camponoti-rufipedis Ophun1|6211
Ophiocordyceps kimflemingae Ophio5|4453 (this protein)
Ophiocordyceps subramaniannii Hirsu2|8725

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4453
MPESENKSSAPSTLGSYVTSAAGAVQSAVGSLTGNAVDQNKGEARKEEAKAEHDASHAAIKVPGATVSSSGAVAK
DDKNRTEGSWNQTVGSAKEAVGGLVGNESLKQTGREQNLEGQKQETKGQLNDMGSGLASRAQGTVGGAVAGLTGD
KKGQEHYEQMRAEGKSQQRGVEHDMQKQVETEDKK
Coding >Ophio5|4453
ATGCCCGAGTCGGAGAACAAGTCCAGCGCACCCTCGACGCTCGGGTCGTACGTAACGTCGGCCGCCGGTGCCGTG
CAGAGCGCCGTCGGCAGCCTGACGGGCAACGCGGTCGATCAGAACAAGGGCGAGGCGCGCAAGGAGGAGGCCAAG
GCCGAGCACGACGCCTCCCACGCAGCTATCAAAGTGCCCGGCGCGACGGTGTCGAGCTCGGGCGCCGTAGCCAAG
GACGACAAGAATCGCACAGAGGGCTCGTGGAACCAGACGGTCGGCTCCGCCAAGGAGGCGGTCGGTGGACTCGTC
GGAAACGAGTCGCTCAAGCAGACGGGCCGCGAGCAGAACCTCGAAGGCCAGAAGCAGGAGACCAAGGGCCAGCTC
AACGACATGGGCTCCGGCTTGGCTAGCCGCGCGCAGGGCACCGTTGGGGGCGCTGTGGCTGGCTTGACGGGCGAC
AAGAAGGGCCAGGAGCATTACGAGCAGATGCGGGCCGAGGGCAAATCGCAGCAGCGAGGTGTTGAGCACGACATG
CAGAAGCAGGTGGAGACTGAGGACAAGAAG
Transcript >Ophio5|4453
ATGCCCGAGTCGGAGAACAAGTCCAGCGCACCCTCGACGCTCGGGTCGTACGTAACGTCGGCCGCCGGTGCCGTG
CAGAGCGCCGTCGGCAGCCTGACGGGCAACGCGGTCGATCAGAACAAGGGCGAGGCGCGCAAGGAGGAGGCCAAG
GCCGAGCACGACGCCTCCCACGCAGCTATCAAAGTGCCCGGCGCGACGGTGTCGAGCTCGGGCGCCGTAGCCAAG
GACGACAAGAATCGCACAGAGGGCTCGTGGAACCAGACGGTCGGCTCCGCCAAGGAGGCGGTCGGTGGACTCGTC
GGAAACGAGTCGCTCAAGCAGACGGGCCGCGAGCAGAACCTCGAAGGCCAGAAGCAGGAGACCAAGGGCCAGCTC
AACGACATGGGCTCCGGCTTGGCTAGCCGCGCGCAGGGCACCGTTGGGGGCGCTGTGGCTGGCTTGACGGGCGAC
AAGAAGGGCCAGGAGCATTACGAGCAGATGCGGGCCGAGGGCAAATCGCAGCAGCGAGGTGTTGAGCACGACATG
CAGAAGCAGGTGGAGACTGAGGACAAGAAGTAG
Gene >Ophio5|4453
ATGCCCGAGTCGGAGAACAAGTCCAGCGCACCCTCGACGCTCGGGTCGTACGTAACGTCGGCCGCCGGTGCCGTG
CAGAGCGCCGTCGGCAGCCTGACGGGCAACGCGGTCGATCAGAACAAGGGCGAGGCGCGCAAGGAGGAGGCCAAG
GCCGAGCACGACGCCTCCCACGCAGCTATCAAAGTGCCCGGCGCGACGGTGTCGAGCTCGGGCGCCGTAGCCAAG
GACGACAAGAATCGCACAGAGGGCTCGTGGAACCAGACGGTCGGCTCCGCCAAGGAGGCGGTCGGTGGACTCGTC
GGAAACGAGGTGGGCAATGGTACTCTCACATAGCCGTCGTCCAAGCACTGACACGGGACGCAGTCGCTCAAGCAG
ACGGGCCGCGAGCAGAACCTCGAAGGCCAGAAGCAGGAGACCAAGGGCCAGCTCAACGACATGGGCTCCGGCTTG
GCTAGCCGCGCGCAGGGCACCGTTGGGGGCGCTGTGGCTGGCTTGACGGGCGACAAGAAGGGCCAGGAGCATTAC
GAGCAGATGCGGGCCGAGGGCAAATCGCAGCAGCGAGGTGTTGAGCACGACATGCAGAAGCAGGTGGAGACTGAG
GACAAGAAGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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