Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4446
Gene name
Locationscaffold_352:2296..3310
Strand-
Gene length (bp)1014
Transcript length (bp)1014
Coding sequence length (bp)1011
Protein length (aa) 337

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O60024|ALL4_ASPFU Allergen Asp f 4 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=AFUA_2G03830 PE=1 SV=2 1 326 1.0E-23

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4446
MKTSLSTLLLAAALGSLAHPSGHGHQHFHRALTQYTKSVPPSNDIADKKSAPVPPSPKEDDVLSPVSAPAAPAIS
DYKDLQPTLPNKQPEQSKPTKESSHSGASFGDGPESYTDFCSDAKSKRATVAQVFEAGNLGNGKYGCNLMLVKSH
YADKYDYTVRFVNDGGHRQECVCWLKMGPDGKQLIGFFEGHQVLTFNVDSKAEQYLAIQADTKGGCSCYKNKVPT
VPSIGQFASTWLEFDMGSKANGGCSGADASSLAAHAAGMDVPGMQVCDAARPYPQGNCSTIYAGGKGNALSYPGG
TADMDGLSVNLNPGPAHYVVKIDYQEPAPADAISPKR
Coding >Ophio5|4446
ATGAAGACGTCCCTCTCGACGCTCCTCTTGGCCGCGGCCTTGGGCTCCCTGGCTCACCCCAGCGGACACGGTCAT
CAACACTTCCACCGCGCCCTCACCCAATACACAAAGTCGGTTCCCCCCTCCAACGATATCGCAGACAAGAAGAGC
GCCCCGGTGCCGCCCTCGCCCAAGGAGGACGATGTGCTGTCTCCCGTCTCTGCCCCCGCTGCGCCTGCCATCTCC
GATTACAAGGACTTGCAACCGACGCTGCCTAATAAGCAGCCAGAACAGTCGAAACCGACCAAGGAGTCGAGTCAC
AGCGGTGCCAGCTTCGGCGACGGCCCCGAGTCGTACACGGATTTCTGCTCCGATGCCAAGTCGAAGCGCGCCACG
GTCGCGCAGGTGTTCGAAGCGGGAAACCTCGGCAATGGCAAGTATGGCTGCAACCTCATGCTGGTCAAGAGCCAT
TACGCCGACAAGTACGACTACACGGTCCGCTTTGTCAACGACGGGGGCCACAGGCAGGAGTGCGTCTGCTGGCTC
AAGATGGGTCCCGACGGCAAACAACTTATCGGCTTTTTCGAGGGCCACCAAGTCTTGACCTTTAACGTCGACTCC
AAAGCCGAGCAATATCTTGCCATCCAGGCGGATACCAAGGGCGGCTGCTCCTGCTACAAGAACAAGGTTCCCACT
GTTCCGTCCATTGGTCAATTCGCAAGCACCTGGCTCGAGTTCGACATGGGAAGCAAGGCCAACGGCGGCTGCTCT
GGCGCCGATGCCTCTTCCCTGGCCGCCCATGCCGCCGGCATGGATGTTCCCGGCATGCAAGTTTGCGACGCAGCC
AGGCCTTATCCCCAGGGGAACTGCTCGACCATCTACGCTGGCGGTAAGGGCAACGCCTTGTCGTACCCGGGCGGC
ACCGCGGACATGGATGGCCTCAGCGTCAACCTGAATCCCGGCCCGGCGCACTACGTTGTCAAGATTGACTACCAG
GAACCGGCTCCCGCGGACGCGATATCGCCCAAGAGG
Transcript >Ophio5|4446
ATGAAGACGTCCCTCTCGACGCTCCTCTTGGCCGCGGCCTTGGGCTCCCTGGCTCACCCCAGCGGACACGGTCAT
CAACACTTCCACCGCGCCCTCACCCAATACACAAAGTCGGTTCCCCCCTCCAACGATATCGCAGACAAGAAGAGC
GCCCCGGTGCCGCCCTCGCCCAAGGAGGACGATGTGCTGTCTCCCGTCTCTGCCCCCGCTGCGCCTGCCATCTCC
GATTACAAGGACTTGCAACCGACGCTGCCTAATAAGCAGCCAGAACAGTCGAAACCGACCAAGGAGTCGAGTCAC
AGCGGTGCCAGCTTCGGCGACGGCCCCGAGTCGTACACGGATTTCTGCTCCGATGCCAAGTCGAAGCGCGCCACG
GTCGCGCAGGTGTTCGAAGCGGGAAACCTCGGCAATGGCAAGTATGGCTGCAACCTCATGCTGGTCAAGAGCCAT
TACGCCGACAAGTACGACTACACGGTCCGCTTTGTCAACGACGGGGGCCACAGGCAGGAGTGCGTCTGCTGGCTC
AAGATGGGTCCCGACGGCAAACAACTTATCGGCTTTTTCGAGGGCCACCAAGTCTTGACCTTTAACGTCGACTCC
AAAGCCGAGCAATATCTTGCCATCCAGGCGGATACCAAGGGCGGCTGCTCCTGCTACAAGAACAAGGTTCCCACT
GTTCCGTCCATTGGTCAATTCGCAAGCACCTGGCTCGAGTTCGACATGGGAAGCAAGGCCAACGGCGGCTGCTCT
GGCGCCGATGCCTCTTCCCTGGCCGCCCATGCCGCCGGCATGGATGTTCCCGGCATGCAAGTTTGCGACGCAGCC
AGGCCTTATCCCCAGGGGAACTGCTCGACCATCTACGCTGGCGGTAAGGGCAACGCCTTGTCGTACCCGGGCGGC
ACCGCGGACATGGATGGCCTCAGCGTCAACCTGAATCCCGGCCCGGCGCACTACGTTGTCAAGATTGACTACCAG
GAACCGGCTCCCGCGGACGCGATATCGCCCAAGAGGTGA
Gene >Ophio5|4446
ATGAAGACGTCCCTCTCGACGCTCCTCTTGGCCGCGGCCTTGGGCTCCCTGGCTCACCCCAGCGGACACGGTCAT
CAACACTTCCACCGCGCCCTCACCCAATACACAAAGTCGGTTCCCCCCTCCAACGATATCGCAGACAAGAAGAGC
GCCCCGGTGCCGCCCTCGCCCAAGGAGGACGATGTGCTGTCTCCCGTCTCTGCCCCCGCTGCGCCTGCCATCTCC
GATTACAAGGACTTGCAACCGACGCTGCCTAATAAGCAGCCAGAACAGTCGAAACCGACCAAGGAGTCGAGTCAC
AGCGGTGCCAGCTTCGGCGACGGCCCCGAGTCGTACACGGATTTCTGCTCCGATGCCAAGTCGAAGCGCGCCACG
GTCGCGCAGGTGTTCGAAGCGGGAAACCTCGGCAATGGCAAGTATGGCTGCAACCTCATGCTGGTCAAGAGCCAT
TACGCCGACAAGTACGACTACACGGTCCGCTTTGTCAACGACGGGGGCCACAGGCAGGAGTGCGTCTGCTGGCTC
AAGATGGGTCCCGACGGCAAACAACTTATCGGCTTTTTCGAGGGCCACCAAGTCTTGACCTTTAACGTCGACTCC
AAAGCCGAGCAATATCTTGCCATCCAGGCGGATACCAAGGGCGGCTGCTCCTGCTACAAGAACAAGGTTCCCACT
GTTCCGTCCATTGGTCAATTCGCAAGCACCTGGCTCGAGTTCGACATGGGAAGCAAGGCCAACGGCGGCTGCTCT
GGCGCCGATGCCTCTTCCCTGGCCGCCCATGCCGCCGGCATGGATGTTCCCGGCATGCAAGTTTGCGACGCAGCC
AGGCCTTATCCCCAGGGGAACTGCTCGACCATCTACGCTGGCGGTAAGGGCAACGCCTTGTCGTACCCGGGCGGC
ACCGCGGACATGGATGGCCTCAGCGTCAACCTGAATCCCGGCCCGGCGCACTACGTTGTCAAGATTGACTACCAG
GAACCGGCTCCCGCGGACGCGATATCGCCCAAGAGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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