Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4415
Gene name
Locationscaffold_35:40250..40840
Strand+
Gene length (bp)590
Transcript length (bp)540
Coding sequence length (bp)537
Protein length (aa) 179

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01565 FAD_binding_4 FAD binding domain 6.6E-18 84 170

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:0036094 small molecule binding No
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No
GO:1901265 nucleoside phosphate binding No
GO:0000166 nucleotide binding No
GO:0003824 catalytic activity No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0043168 anion binding No
GO:1901363 heterocyclic compound binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 25 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4415
MLGNITASGWGSLLLGLTFWGNQSEKAGFSHSNTWRVAPSLDLRPLLSDPARGWSLNTTILFPDSPEFSKATERW
TVFRPPTYRAAIRPGTAEDISKIIKLATSHKIPFLTRGAGHSYSVTLAEFQHGLALDLSQFKSIEIDSDAETLTV
GPGVTFNDIFDPLYQAGFQLREYPPPLEF
Coding >Ophio5|4415
ATGCTTGGAAATATCACTGCTTCCGGTTGGGGTTCCCTTCTCCTTGGGCTTACCTTTTGGGGAAACCAATCAGAG
AAAGCTGGTTTCTCCCATAGCAACACATGGCGAGTAGCTCCGAGTCTTGACTTGAGGCCTCTTCTTAGCGACCCT
GCTCGTGGCTGGTCATTAAACACTACTATCTTGTTCCCCGACTCTCCCGAATTTTCGAAAGCCACAGAGCGATGG
ACTGTCTTCCGCCCGCCGACTTATCGCGCCGCCATCAGACCCGGAACGGCCGAGGACATCAGTAAAATCATCAAA
CTTGCCACGTCCCACAAGATTCCGTTCCTTACCAGAGGCGCGGGTCACAGCTACAGCGTAACGCTCGCAGAGTTT
CAACATGGTCTTGCTCTAGATCTCAGCCAATTCAAGTCCATTGAGATAGACAGCGATGCCGAGACTTTGACCGTT
GGCCCTGGTGTCACGTTTAATGATATCTTCGACCCATTATACCAGGCTGGCTTCCAACTCCGTGAGTATCCCCCC
CCTCTAGAATTT
Transcript >Ophio5|4415
ATGCTTGGAAATATCACTGCTTCCGGTTGGGGTTCCCTTCTCCTTGGGCTTACCTTTTGGGGAAACCAATCAGAG
AAAGCTGGTTTCTCCCATAGCAACACATGGCGAGTAGCTCCGAGTCTTGACTTGAGGCCTCTTCTTAGCGACCCT
GCTCGTGGCTGGTCATTAAACACTACTATCTTGTTCCCCGACTCTCCCGAATTTTCGAAAGCCACAGAGCGATGG
ACTGTCTTCCGCCCGCCGACTTATCGCGCCGCCATCAGACCCGGAACGGCCGAGGACATCAGTAAAATCATCAAA
CTTGCCACGTCCCACAAGATTCCGTTCCTTACCAGAGGCGCGGGTCACAGCTACAGCGTAACGCTCGCAGAGTTT
CAACATGGTCTTGCTCTAGATCTCAGCCAATTCAAGTCCATTGAGATAGACAGCGATGCCGAGACTTTGACCGTT
GGCCCTGGTGTCACGTTTAATGATATCTTCGACCCATTATACCAGGCTGGCTTCCAACTCCGTGAGTATCCCCCC
CCTCTAGAATTTTGA
Gene >Ophio5|4415
ATGCTTGGAAATATCACTGCTTCCGGTTGGGGTTCCCTTCTCCTTGGGCTTACCTTTTGGGGAAACCAATCAGAG
AAAGCTGGTTTCTCCCATAGCAACACATGGCGAGTAGCTCCGAGTCTTGACTTGAGGCCTCTTCTTAGCGACCCT
GCTCGTGGCTGGTCATTAAACACTACTATCTTGTTCCCCGACTCTCCCGAATTTTCGAAAGCCACAGAGCGATGG
ACTGTCTTCCGCCCGCCGACTTATCGCGCCGCCATCAGACCCGGAACGGCCGAGGACATCAGTAAAATCGTGAGT
CGAGACGAGTCTTTAGCAAGCATGAGCCGCTAATCTGTTCCAAGATCAAACTTGCCACGTCCCACAAGATTCCGT
TCCTTACCAGAGGCGCGGGTCACAGCTACAGCGTAACGCTCGCAGAGTTTCAACATGGTCTTGCTCTAGATCTCA
GCCAATTCAAGTCCATTGAGATAGACAGCGATGCCGAGACTTTGACCGTTGGCCCTGGTGTCACGTTTAATGATA
TCTTCGACCCATTATACCAGGCTGGCTTCCAACTCCGTGAGTATCCCCCCCCTCTAGAATTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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