Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4407
Gene name
Locationscaffold_35:21617..22774
Strand+
Gene length (bp)1157
Transcript length (bp)1098
Coding sequence length (bp)1095
Protein length (aa) 365

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11204 DUF2985 Protein of unknown function (DUF2985) 8.3E-34 111 194

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 28 0.45

Transmembrane Domains

Domain # Start End Length
1 117 139 22
2 166 185 19
3 270 292 22
4 297 319 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4407
MPTPDKPADAVRSQPNRWPQPTARLDPTFKGFGQFELSPWPDRQKGEQKGVVGPMHFTGIHLGRQITSDSFIGLR
YELEPPAAAPFPNGYHFPPKHSLGESLKIRAKAFWNYVRTPIGFLVTLYCLNVVGWGGMIFLLSLNAAPAMCNPS
CDDEDSARKIWIEIDAQVLNALFCVIGIGLAPWRFKQLYLLMRYRLGNIEYLRRLAGIHRQWYRLAGSTNLPPFI
GPQNVEVASLESQLLAIPSPETKIPDAPLTGMRAPSTRPWKLDMVIWMKVSNSLLQAGLAALMWGFSRFDRPTWA
TSSAVFLACTVGTVEGIILIKEKKRIKRVEGVPVSQKDLDRLRNDRARGIWHYNNIKDKDLSGKH
Coding >Ophio5|4407
ATGCCCACGCCTGATAAGCCCGCAGACGCGGTGCGCTCTCAGCCGAACCGATGGCCTCAACCGACCGCCCGCCTC
GATCCCACCTTTAAGGGTTTCGGCCAGTTCGAGCTATCGCCGTGGCCAGACCGGCAGAAAGGCGAGCAGAAAGGA
GTCGTCGGGCCTATGCATTTTACCGGCATCCATCTTGGCAGACAAATCACCAGCGACTCCTTTATCGGGTTGCGA
TATGAACTTGAACCGCCCGCGGCCGCTCCCTTTCCGAATGGCTATCATTTTCCTCCCAAGCACTCCTTGGGCGAG
TCTCTGAAGATACGCGCCAAGGCTTTCTGGAATTATGTGCGGACGCCGATCGGCTTCTTGGTTACGCTCTACTGC
CTCAATGTTGTCGGCTGGGGGGGAATGATCTTTCTCCTGAGCCTCAACGCCGCGCCGGCCATGTGTAATCCGTCC
TGTGACGATGAAGACTCGGCTCGGAAAATATGGATCGAGATCGATGCCCAAGTCCTCAACGCACTCTTCTGCGTC
ATCGGCATAGGACTGGCCCCTTGGCGATTTAAGCAGCTATACCTGCTGATGCGATACCGACTCGGTAATATCGAA
TATCTGCGTCGGCTCGCCGGTATTCACCGACAATGGTACAGACTTGCCGGCTCTACCAATCTGCCACCCTTCATC
GGCCCTCAGAACGTCGAGGTAGCCTCTCTCGAGAGTCAGCTGTTGGCGATTCCAAGTCCCGAGACGAAGATCCCC
GATGCGCCGCTAACCGGAATGCGGGCACCGTCCACTCGGCCCTGGAAGCTGGACATGGTGATTTGGATGAAGGTG
TCGAACTCGCTCCTTCAGGCTGGTCTCGCGGCACTCATGTGGGGGTTCAGTCGATTTGATCGACCCACCTGGGCA
ACGAGCAGTGCCGTCTTCCTTGCCTGTACCGTCGGCACCGTCGAGGGCATCATCTTGATCAAGGAGAAGAAAAGG
ATCAAGCGGGTCGAGGGGGTGCCCGTCAGCCAAAAGGACCTTGACCGTCTGAGGAACGATAGGGCTCGTGGAATT
TGGCATTACAATAACATCAAGGACAAGGACTTGAGCGGGAAGCAT
Transcript >Ophio5|4407
ATGCCCACGCCTGATAAGCCCGCAGACGCGGTGCGCTCTCAGCCGAACCGATGGCCTCAACCGACCGCCCGCCTC
GATCCCACCTTTAAGGGTTTCGGCCAGTTCGAGCTATCGCCGTGGCCAGACCGGCAGAAAGGCGAGCAGAAAGGA
GTCGTCGGGCCTATGCATTTTACCGGCATCCATCTTGGCAGACAAATCACCAGCGACTCCTTTATCGGGTTGCGA
TATGAACTTGAACCGCCCGCGGCCGCTCCCTTTCCGAATGGCTATCATTTTCCTCCCAAGCACTCCTTGGGCGAG
TCTCTGAAGATACGCGCCAAGGCTTTCTGGAATTATGTGCGGACGCCGATCGGCTTCTTGGTTACGCTCTACTGC
CTCAATGTTGTCGGCTGGGGGGGAATGATCTTTCTCCTGAGCCTCAACGCCGCGCCGGCCATGTGTAATCCGTCC
TGTGACGATGAAGACTCGGCTCGGAAAATATGGATCGAGATCGATGCCCAAGTCCTCAACGCACTCTTCTGCGTC
ATCGGCATAGGACTGGCCCCTTGGCGATTTAAGCAGCTATACCTGCTGATGCGATACCGACTCGGTAATATCGAA
TATCTGCGTCGGCTCGCCGGTATTCACCGACAATGGTACAGACTTGCCGGCTCTACCAATCTGCCACCCTTCATC
GGCCCTCAGAACGTCGAGGTAGCCTCTCTCGAGAGTCAGCTGTTGGCGATTCCAAGTCCCGAGACGAAGATCCCC
GATGCGCCGCTAACCGGAATGCGGGCACCGTCCACTCGGCCCTGGAAGCTGGACATGGTGATTTGGATGAAGGTG
TCGAACTCGCTCCTTCAGGCTGGTCTCGCGGCACTCATGTGGGGGTTCAGTCGATTTGATCGACCCACCTGGGCA
ACGAGCAGTGCCGTCTTCCTTGCCTGTACCGTCGGCACCGTCGAGGGCATCATCTTGATCAAGGAGAAGAAAAGG
ATCAAGCGGGTCGAGGGGGTGCCCGTCAGCCAAAAGGACCTTGACCGTCTGAGGAACGATAGGGCTCGTGGAATT
TGGCATTACAATAACATCAAGGACAAGGACTTGAGCGGGAAGCATTGA
Gene >Ophio5|4407
ATGCCCACGCCTGATAAGCCCGCAGACGCGGTGCGCTCTCAGCCGAACCGATGGCCTCAACCGACCGCCCGCCTC
GATCCCACCTTTAAGGGTTTCGGCCAGTTCGAGCTATCGCCGTGGCCAGACCGGCAGAAAGGCGAGCAGAAAGGA
GTCGTCGGGCCTATGCATTTTACCGGCATCCATCTTGGCAGACAAATCACCAGCGACTCCTTTATCGGGTTGCGA
TATGAACTTGAACCGCCCGCGGCCGCTCCCTTTCCGAATGGCTATCATTTTCCTCCCAAGCACTCCTTGGGCGAG
TCTCTGAAGATACGCGCCAAGGCTTTCTGGAATTATGTGCGGACGCCGATCGGCTTCTTGGTTACGCTCTACTGC
CTCAATGTTGTCGGCTGGGGGGGAATGATCTTTCTCCTGAGCCTCAACGCCGGTTAGTGCTTTCCTCCGAATTCA
ATATCAGAGAACCTACCTGGATTGACATTACCACAGCGCCGGCCATGTGTAATCCGTCCTGTGACGATGAAGACT
CGGCTCGGAAAATATGGATCGAGATCGATGCCCAAGTCCTCAACGCACTCTTCTGCGTCATCGGCATAGGACTGG
CCCCTTGGCGATTTAAGCAGCTATACCTGCTGATGCGATACCGACTCGGTAATATCGAATATCTGCGTCGGCTCG
CCGGTATTCACCGACAATGGTACAGACTTGCCGGCTCTACCAATCTGCCACCCTTCATCGGCCCTCAGAACGTCG
AGGTAGCCTCTCTCGAGAGTCAGCTGTTGGCGATTCCAAGTCCCGAGACGAAGATCCCCGATGCGCCGCTAACCG
GAATGCGGGCACCGTCCACTCGGCCCTGGAAGCTGGACATGGTGATTTGGATGAAGGTGTCGAACTCGCTCCTTC
AGGCTGGTCTCGCGGCACTCATGTGGGGGTTCAGTCGATTTGATCGACCCACCTGGGCAACGAGCAGTGCCGTCT
TCCTTGCCTGTACCGTCGGCACCGTCGAGGGCATCATCTTGATCAAGGAGAAGAAAAGGATCAAGCGGGTCGAGG
GGGTGCCCGTCAGCCAAAAGGACCTTGACCGTCTGAGGAACGATAGGGCTCGTGGAATTTGGCATTACAATAACA
TCAAGGACAAGGACTTGAGCGGGAAGCATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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