Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4381
Gene name
Locationscaffold_348:1092..2448
Strand-
Gene length (bp)1356
Transcript length (bp)1356
Coding sequence length (bp)1353
Protein length (aa) 451

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 39 61 22
3 77 99 22
4 119 141 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4381
MARATLPVLGSTLALLATSTVLCLQIITVVNTISAPLRPATAAAACLQLFVLAILWWLAVSRVLRNGKTISAKYP
NLTLGLGLLACALAAAVSAAALIYLGNARADLNAAIGQFQGRLLAGTSVAVALATVLQLACIICHFMTSRQLVLG
KQVTPEAHATNPRRRLRRIKSIPYSQTKSGDDEATQEMTSSIQPPSPVVTASPTGIFKSPFAQAVRPSPSKQKLI
VNKKQRRPNSADSDPRRSSVEASSFDSWDTSSVDAHNRQVVLDMSGSPSSTPQGLETIPASPSHSRSSSARSPTD
LGPPRSLRTSRSLSHSTLRHQEEARVTPASSVHELHIHPLFRSDSQEPPPLASPGTSVLASPIAGQVITRRESSK
SLGGMIRSGSATGAQSPLAHQTCFESTESMAGDDSRQRDEPEPEPKPEPEPEDEDERRMTPPVPSWLLTQPNIES
V
Coding >Ophio5|4381
ATGGCACGCGCCACCTTGCCCGTACTTGGCAGTACGCTGGCCCTGCTCGCAACGTCAACAGTCTTGTGTCTGCAA
ATCATCACCGTCGTCAACACGATATCTGCGCCCCTGCGGCCCGCCACTGCGGCTGCCGCCTGCTTGCAGTTGTTT
GTCCTCGCCATCCTCTGGTGGCTCGCCGTATCCCGCGTCTTGCGGAACGGTAAAACCATCTCGGCCAAGTATCCG
AATCTCACACTCGGCCTCGGGCTCCTGGCCTGCGCGCTCGCCGCTGCCGTCTCCGCCGCGGCCTTGATATATCTG
GGCAACGCCCGAGCCGATTTGAATGCAGCCATAGGCCAGTTTCAGGGCCGGCTGCTGGCAGGGACTTCGGTCGCC
GTGGCACTCGCCACCGTCCTCCAACTCGCCTGCATCATTTGTCACTTCATGACATCTCGACAGCTCGTCCTTGGC
AAGCAAGTTACCCCTGAGGCGCACGCCACCAACCCCAGAAGGCGACTGCGTCGGATCAAGTCGATCCCCTACAGC
CAGACGAAAAGCGGTGACGACGAAGCGACGCAGGAGATGACGTCGTCCATCCAACCCCCATCCCCCGTCGTCACG
GCGTCGCCCACGGGCATCTTCAAGTCTCCTTTTGCTCAAGCTGTCCGACCGAGTCCTTCCAAGCAAAAGTTGATT
GTCAACAAGAAGCAGCGACGACCCAATTCTGCCGACTCGGACCCTCGCCGAAGTAGCGTCGAGGCATCTTCATTC
GATTCGTGGGACACGTCTTCGGTGGATGCACACAACCGGCAGGTGGTGCTGGACATGTCGGGCTCTCCATCCTCC
ACGCCGCAGGGGCTCGAGACGATCCCCGCCAGTCCGTCGCACAGTCGAAGCTCAAGCGCGAGAAGCCCAACGGAC
CTCGGGCCACCGCGGTCGCTGCGGACCAGCCGGAGCTTGAGTCACAGCACGCTGAGACATCAGGAAGAGGCTCGA
GTTACGCCTGCGAGCTCCGTCCACGAGCTGCACATTCACCCGCTGTTTCGATCCGATTCGCAGGAGCCGCCGCCG
CTGGCGTCGCCCGGGACGAGCGTCCTGGCTTCGCCCATCGCAGGGCAGGTCATCACACGGCGCGAAAGTAGCAAG
TCGCTTGGTGGGATGATACGAAGCGGCAGTGCAACGGGGGCGCAAAGCCCGCTGGCCCATCAGACTTGCTTCGAA
AGCACAGAATCAATGGCAGGCGACGATTCTCGGCAGCGAGATGAGCCGGAGCCGGAGCCGAAGCCGGAGCCGGAG
CCGGAAGACGAGGACGAGCGGAGGATGACGCCTCCGGTGCCGTCGTGGCTGCTTACCCAGCCAAATATCGAGAGC
GTG
Transcript >Ophio5|4381
ATGGCACGCGCCACCTTGCCCGTACTTGGCAGTACGCTGGCCCTGCTCGCAACGTCAACAGTCTTGTGTCTGCAA
ATCATCACCGTCGTCAACACGATATCTGCGCCCCTGCGGCCCGCCACTGCGGCTGCCGCCTGCTTGCAGTTGTTT
GTCCTCGCCATCCTCTGGTGGCTCGCCGTATCCCGCGTCTTGCGGAACGGTAAAACCATCTCGGCCAAGTATCCG
AATCTCACACTCGGCCTCGGGCTCCTGGCCTGCGCGCTCGCCGCTGCCGTCTCCGCCGCGGCCTTGATATATCTG
GGCAACGCCCGAGCCGATTTGAATGCAGCCATAGGCCAGTTTCAGGGCCGGCTGCTGGCAGGGACTTCGGTCGCC
GTGGCACTCGCCACCGTCCTCCAACTCGCCTGCATCATTTGTCACTTCATGACATCTCGACAGCTCGTCCTTGGC
AAGCAAGTTACCCCTGAGGCGCACGCCACCAACCCCAGAAGGCGACTGCGTCGGATCAAGTCGATCCCCTACAGC
CAGACGAAAAGCGGTGACGACGAAGCGACGCAGGAGATGACGTCGTCCATCCAACCCCCATCCCCCGTCGTCACG
GCGTCGCCCACGGGCATCTTCAAGTCTCCTTTTGCTCAAGCTGTCCGACCGAGTCCTTCCAAGCAAAAGTTGATT
GTCAACAAGAAGCAGCGACGACCCAATTCTGCCGACTCGGACCCTCGCCGAAGTAGCGTCGAGGCATCTTCATTC
GATTCGTGGGACACGTCTTCGGTGGATGCACACAACCGGCAGGTGGTGCTGGACATGTCGGGCTCTCCATCCTCC
ACGCCGCAGGGGCTCGAGACGATCCCCGCCAGTCCGTCGCACAGTCGAAGCTCAAGCGCGAGAAGCCCAACGGAC
CTCGGGCCACCGCGGTCGCTGCGGACCAGCCGGAGCTTGAGTCACAGCACGCTGAGACATCAGGAAGAGGCTCGA
GTTACGCCTGCGAGCTCCGTCCACGAGCTGCACATTCACCCGCTGTTTCGATCCGATTCGCAGGAGCCGCCGCCG
CTGGCGTCGCCCGGGACGAGCGTCCTGGCTTCGCCCATCGCAGGGCAGGTCATCACACGGCGCGAAAGTAGCAAG
TCGCTTGGTGGGATGATACGAAGCGGCAGTGCAACGGGGGCGCAAAGCCCGCTGGCCCATCAGACTTGCTTCGAA
AGCACAGAATCAATGGCAGGCGACGATTCTCGGCAGCGAGATGAGCCGGAGCCGGAGCCGAAGCCGGAGCCGGAG
CCGGAAGACGAGGACGAGCGGAGGATGACGCCTCCGGTGCCGTCGTGGCTGCTTACCCAGCCAAATATCGAGAGC
GTGTAG
Gene >Ophio5|4381
ATGGCACGCGCCACCTTGCCCGTACTTGGCAGTACGCTGGCCCTGCTCGCAACGTCAACAGTCTTGTGTCTGCAA
ATCATCACCGTCGTCAACACGATATCTGCGCCCCTGCGGCCCGCCACTGCGGCTGCCGCCTGCTTGCAGTTGTTT
GTCCTCGCCATCCTCTGGTGGCTCGCCGTATCCCGCGTCTTGCGGAACGGTAAAACCATCTCGGCCAAGTATCCG
AATCTCACACTCGGCCTCGGGCTCCTGGCCTGCGCGCTCGCCGCTGCCGTCTCCGCCGCGGCCTTGATATATCTG
GGCAACGCCCGAGCCGATTTGAATGCAGCCATAGGCCAGTTTCAGGGCCGGCTGCTGGCAGGGACTTCGGTCGCC
GTGGCACTCGCCACCGTCCTCCAACTCGCCTGCATCATTTGTCACTTCATGACATCTCGACAGCTCGTCCTTGGC
AAGCAAGTTACCCCTGAGGCGCACGCCACCAACCCCAGAAGGCGACTGCGTCGGATCAAGTCGATCCCCTACAGC
CAGACGAAAAGCGGTGACGACGAAGCGACGCAGGAGATGACGTCGTCCATCCAACCCCCATCCCCCGTCGTCACG
GCGTCGCCCACGGGCATCTTCAAGTCTCCTTTTGCTCAAGCTGTCCGACCGAGTCCTTCCAAGCAAAAGTTGATT
GTCAACAAGAAGCAGCGACGACCCAATTCTGCCGACTCGGACCCTCGCCGAAGTAGCGTCGAGGCATCTTCATTC
GATTCGTGGGACACGTCTTCGGTGGATGCACACAACCGGCAGGTGGTGCTGGACATGTCGGGCTCTCCATCCTCC
ACGCCGCAGGGGCTCGAGACGATCCCCGCCAGTCCGTCGCACAGTCGAAGCTCAAGCGCGAGAAGCCCAACGGAC
CTCGGGCCACCGCGGTCGCTGCGGACCAGCCGGAGCTTGAGTCACAGCACGCTGAGACATCAGGAAGAGGCTCGA
GTTACGCCTGCGAGCTCCGTCCACGAGCTGCACATTCACCCGCTGTTTCGATCCGATTCGCAGGAGCCGCCGCCG
CTGGCGTCGCCCGGGACGAGCGTCCTGGCTTCGCCCATCGCAGGGCAGGTCATCACACGGCGCGAAAGTAGCAAG
TCGCTTGGTGGGATGATACGAAGCGGCAGTGCAACGGGGGCGCAAAGCCCGCTGGCCCATCAGACTTGCTTCGAA
AGCACAGAATCAATGGCAGGCGACGATTCTCGGCAGCGAGATGAGCCGGAGCCGGAGCCGAAGCCGGAGCCGGAG
CCGGAAGACGAGGACGAGCGGAGGATGACGCCTCCGGTGCCGTCGTGGCTGCTTACCCAGCCAAATATCGAGAGC
GTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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