Protein ID | Ophio5|4352 |
Gene name | |
Location | scaffold_344:8945..10025 |
Strand | + |
Gene length (bp) | 1080 |
Transcript length (bp) | 765 |
Coding sequence length (bp) | 762 |
Protein length (aa) | 254 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13640 | 2OG-FeII_Oxy_3 | 2OG-Fe(II) oxygenase superfamily | 7.3E-10 | 134 | 234 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 61 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|4352 MPKAKASSNRLVATSQHAEQKTPAWPRFKPPLPVTDLAPQLHPATSMIALIPYFFPRSLCRDFVAFLKTLPLQTT PGRPKRGEAARVNDRFQVDDALFARRLWEQTGLKEALTEVEGVKDMWDGEPVGLNANIRVYRYTKGQYFDCHYDD DNDVELPTDPPTPARTTWTLLLYLTSAAEGCIGGETVFYPHDCKSPTEAIAVPPETGLLLLHKHGAECLLHEGRE VTAGEKWVLRTDLCVRSRLAVLPTGQLSG |
Coding | >Ophio5|4352 ATGCCCAAGGCCAAGGCCTCGTCCAATCGCCTGGTCGCGACCTCCCAACACGCGGAACAAAAAACGCCAGCATGG CCTCGGTTCAAGCCTCCGCTGCCCGTGACAGATCTCGCGCCGCAGTTGCACCCCGCGACGTCCATGATCGCCCTT ATCCCGTACTTCTTCCCGCGCTCTCTGTGCCGCGACTTTGTGGCCTTTCTCAAGACGTTGCCATTGCAGACGACA CCTGGGCGGCCGAAACGCGGCGAGGCGGCGCGCGTCAACGACCGGTTCCAGGTCGACGACGCCCTTTTCGCCCGT CGGCTGTGGGAGCAGACGGGCTTGAAGGAGGCTCTTACCGAGGTTGAAGGCGTCAAGGACATGTGGGACGGCGAG CCCGTCGGGTTGAATGCCAACATCAGGGTGTATCGTTATACCAAGGGGCAATACTTCGATTGCCATTACGACGAT GACAATGACGTAGAGCTCCCGACGGACCCGCCAACGCCTGCTCGCACGACCTGGACGCTACTGCTCTATCTCACC TCGGCGGCAGAGGGCTGCATCGGAGGCGAGACCGTCTTTTACCCCCATGACTGCAAGTCTCCGACCGAGGCGATT GCCGTGCCGCCGGAGACGGGCCTGTTGCTACTGCACAAGCACGGCGCCGAATGCCTTTTGCACGAGGGTCGTGAG GTGACGGCGGGTGAGAAATGGGTCTTGCGAACGGATCTCTGCGTCAGGAGCAGACTTGCAGTCTTACCGACTGGT CAGTTGTCGGGA |
Transcript | >Ophio5|4352 ATGCCCAAGGCCAAGGCCTCGTCCAATCGCCTGGTCGCGACCTCCCAACACGCGGAACAAAAAACGCCAGCATGG CCTCGGTTCAAGCCTCCGCTGCCCGTGACAGATCTCGCGCCGCAGTTGCACCCCGCGACGTCCATGATCGCCCTT ATCCCGTACTTCTTCCCGCGCTCTCTGTGCCGCGACTTTGTGGCCTTTCTCAAGACGTTGCCATTGCAGACGACA CCTGGGCGGCCGAAACGCGGCGAGGCGGCGCGCGTCAACGACCGGTTCCAGGTCGACGACGCCCTTTTCGCCCGT CGGCTGTGGGAGCAGACGGGCTTGAAGGAGGCTCTTACCGAGGTTGAAGGCGTCAAGGACATGTGGGACGGCGAG CCCGTCGGGTTGAATGCCAACATCAGGGTGTATCGTTATACCAAGGGGCAATACTTCGATTGCCATTACGACGAT GACAATGACGTAGAGCTCCCGACGGACCCGCCAACGCCTGCTCGCACGACCTGGACGCTACTGCTCTATCTCACC TCGGCGGCAGAGGGCTGCATCGGAGGCGAGACCGTCTTTTACCCCCATGACTGCAAGTCTCCGACCGAGGCGATT GCCGTGCCGCCGGAGACGGGCCTGTTGCTACTGCACAAGCACGGCGCCGAATGCCTTTTGCACGAGGGTCGTGAG GTGACGGCGGGTGAGAAATGGGTCTTGCGAACGGATCTCTGCGTCAGGAGCAGACTTGCAGTCTTACCGACTGGT CAGTTGTCGGGATGA |
Gene | >Ophio5|4352 ATGCCCAAGGCCAAGGCCTCGTCCAATCGCCTGGTCGCGACCTCCCAACACGCGGAACAAAAAACGCCAGCATGG CCTCGGTTCAAGCCTCCGCTGCCCGTGACAGATCTCGCGCCGCAGTTGCACCCCGCGACGTCCATGATCGCCCTT ATCCCGTACTTCTTCCCGCGCTCTCTGTGCCGCGACTTTGTGGCCTTTCTCAAGACGTTGCCATTGCAGACGACA CCTGGGCGGCCGAAACGCGGCGAGGCGGCGCGCGTCAACGACCGGTTCCAGGTCGACGACGCCCTTTTCGCCCGT CGGCTGTGGGAGCAGACGGGCTTGAAGGAGGCTCTTACCGAGGTTGAAGGCGTCAAGGACATGTGGTGCGTTTGG CGGTGAGTGTTGAAGCGCGATATGGGGACGCTGACCGTTTGATCGTCGTCTCCATAGGGACGGCGAGCCCGTCGG GTTGAATGCCAACATCAGGGTGTATCGTTATACCAAGGGGCAATACTTCGATTGCCATTGTGCGTCTTCGTCTCG CGCCTTGTGCTGGTGCAACGGCTGACAGAAAGACGTGCTATGGCGGTAGACGACGATGACAATGACGTAGAGCTC CCGACGGACCCGCCAACGCCTGCTCGCACGACCTGGACGCTACTGCTCTATCTCACCTCGGCGGCAGAGGGCTGC ATCGGAGGCGAGACCGTCTTTTACCCCCATGACTGCAAGTCTCCGACCGAGGCGATTGCCGTGCCGCCGGAGACG GGCCTGTTGCTACTGCACAAGCACGGCGCCGAATGCCTTTTGGTGGGTGCCTCCCGCCTTGGGGTCGACGTGTCT GGCTGACCAACTCGCAGCACGAGGGTCGTGAGGTGACGGCGGGTGAGAAATGGGTCTTGCGAACGGATCTCTGCG TCAGGAGGTGAATGGCGCCGACGATTCGCGGCGAGACGACGGTTCTTAACGTAGGAGCAGCAGACTTGCAGTCTT ACCGACTGGTCAGTTGGTAAGTAATACACGCCCTTTTCAATGATTGGCCCGAGTCGCTGACCTCGCGGTGGGATT CGTCCCATGTCTCTGCGATAGTCGGGATGA |