Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4352
Gene name
Locationscaffold_344:8945..10025
Strand+
Gene length (bp)1080
Transcript length (bp)765
Coding sequence length (bp)762
Protein length (aa) 254

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13640 2OG-FeII_Oxy_3 2OG-Fe(II) oxygenase superfamily 7.3E-10 134 234

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 61 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4352
MPKAKASSNRLVATSQHAEQKTPAWPRFKPPLPVTDLAPQLHPATSMIALIPYFFPRSLCRDFVAFLKTLPLQTT
PGRPKRGEAARVNDRFQVDDALFARRLWEQTGLKEALTEVEGVKDMWDGEPVGLNANIRVYRYTKGQYFDCHYDD
DNDVELPTDPPTPARTTWTLLLYLTSAAEGCIGGETVFYPHDCKSPTEAIAVPPETGLLLLHKHGAECLLHEGRE
VTAGEKWVLRTDLCVRSRLAVLPTGQLSG
Coding >Ophio5|4352
ATGCCCAAGGCCAAGGCCTCGTCCAATCGCCTGGTCGCGACCTCCCAACACGCGGAACAAAAAACGCCAGCATGG
CCTCGGTTCAAGCCTCCGCTGCCCGTGACAGATCTCGCGCCGCAGTTGCACCCCGCGACGTCCATGATCGCCCTT
ATCCCGTACTTCTTCCCGCGCTCTCTGTGCCGCGACTTTGTGGCCTTTCTCAAGACGTTGCCATTGCAGACGACA
CCTGGGCGGCCGAAACGCGGCGAGGCGGCGCGCGTCAACGACCGGTTCCAGGTCGACGACGCCCTTTTCGCCCGT
CGGCTGTGGGAGCAGACGGGCTTGAAGGAGGCTCTTACCGAGGTTGAAGGCGTCAAGGACATGTGGGACGGCGAG
CCCGTCGGGTTGAATGCCAACATCAGGGTGTATCGTTATACCAAGGGGCAATACTTCGATTGCCATTACGACGAT
GACAATGACGTAGAGCTCCCGACGGACCCGCCAACGCCTGCTCGCACGACCTGGACGCTACTGCTCTATCTCACC
TCGGCGGCAGAGGGCTGCATCGGAGGCGAGACCGTCTTTTACCCCCATGACTGCAAGTCTCCGACCGAGGCGATT
GCCGTGCCGCCGGAGACGGGCCTGTTGCTACTGCACAAGCACGGCGCCGAATGCCTTTTGCACGAGGGTCGTGAG
GTGACGGCGGGTGAGAAATGGGTCTTGCGAACGGATCTCTGCGTCAGGAGCAGACTTGCAGTCTTACCGACTGGT
CAGTTGTCGGGA
Transcript >Ophio5|4352
ATGCCCAAGGCCAAGGCCTCGTCCAATCGCCTGGTCGCGACCTCCCAACACGCGGAACAAAAAACGCCAGCATGG
CCTCGGTTCAAGCCTCCGCTGCCCGTGACAGATCTCGCGCCGCAGTTGCACCCCGCGACGTCCATGATCGCCCTT
ATCCCGTACTTCTTCCCGCGCTCTCTGTGCCGCGACTTTGTGGCCTTTCTCAAGACGTTGCCATTGCAGACGACA
CCTGGGCGGCCGAAACGCGGCGAGGCGGCGCGCGTCAACGACCGGTTCCAGGTCGACGACGCCCTTTTCGCCCGT
CGGCTGTGGGAGCAGACGGGCTTGAAGGAGGCTCTTACCGAGGTTGAAGGCGTCAAGGACATGTGGGACGGCGAG
CCCGTCGGGTTGAATGCCAACATCAGGGTGTATCGTTATACCAAGGGGCAATACTTCGATTGCCATTACGACGAT
GACAATGACGTAGAGCTCCCGACGGACCCGCCAACGCCTGCTCGCACGACCTGGACGCTACTGCTCTATCTCACC
TCGGCGGCAGAGGGCTGCATCGGAGGCGAGACCGTCTTTTACCCCCATGACTGCAAGTCTCCGACCGAGGCGATT
GCCGTGCCGCCGGAGACGGGCCTGTTGCTACTGCACAAGCACGGCGCCGAATGCCTTTTGCACGAGGGTCGTGAG
GTGACGGCGGGTGAGAAATGGGTCTTGCGAACGGATCTCTGCGTCAGGAGCAGACTTGCAGTCTTACCGACTGGT
CAGTTGTCGGGATGA
Gene >Ophio5|4352
ATGCCCAAGGCCAAGGCCTCGTCCAATCGCCTGGTCGCGACCTCCCAACACGCGGAACAAAAAACGCCAGCATGG
CCTCGGTTCAAGCCTCCGCTGCCCGTGACAGATCTCGCGCCGCAGTTGCACCCCGCGACGTCCATGATCGCCCTT
ATCCCGTACTTCTTCCCGCGCTCTCTGTGCCGCGACTTTGTGGCCTTTCTCAAGACGTTGCCATTGCAGACGACA
CCTGGGCGGCCGAAACGCGGCGAGGCGGCGCGCGTCAACGACCGGTTCCAGGTCGACGACGCCCTTTTCGCCCGT
CGGCTGTGGGAGCAGACGGGCTTGAAGGAGGCTCTTACCGAGGTTGAAGGCGTCAAGGACATGTGGTGCGTTTGG
CGGTGAGTGTTGAAGCGCGATATGGGGACGCTGACCGTTTGATCGTCGTCTCCATAGGGACGGCGAGCCCGTCGG
GTTGAATGCCAACATCAGGGTGTATCGTTATACCAAGGGGCAATACTTCGATTGCCATTGTGCGTCTTCGTCTCG
CGCCTTGTGCTGGTGCAACGGCTGACAGAAAGACGTGCTATGGCGGTAGACGACGATGACAATGACGTAGAGCTC
CCGACGGACCCGCCAACGCCTGCTCGCACGACCTGGACGCTACTGCTCTATCTCACCTCGGCGGCAGAGGGCTGC
ATCGGAGGCGAGACCGTCTTTTACCCCCATGACTGCAAGTCTCCGACCGAGGCGATTGCCGTGCCGCCGGAGACG
GGCCTGTTGCTACTGCACAAGCACGGCGCCGAATGCCTTTTGGTGGGTGCCTCCCGCCTTGGGGTCGACGTGTCT
GGCTGACCAACTCGCAGCACGAGGGTCGTGAGGTGACGGCGGGTGAGAAATGGGTCTTGCGAACGGATCTCTGCG
TCAGGAGGTGAATGGCGCCGACGATTCGCGGCGAGACGACGGTTCTTAACGTAGGAGCAGCAGACTTGCAGTCTT
ACCGACTGGTCAGTTGGTAAGTAATACACGCCCTTTTCAATGATTGGCCCGAGTCGCTGACCTCGCGGTGGGATT
CGTCCCATGTCTCTGCGATAGTCGGGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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