Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4237
Gene name
Locationscaffold_333:15814..17714
Strand+
Gene length (bp)1900
Transcript length (bp)1635
Coding sequence length (bp)1632
Protein length (aa) 544

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 1.4E-28 83 459

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 44 517 3.0E-42
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 37 527 5.0E-39
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 36 528 2.0E-37
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 44 506 5.0E-36
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 31 543 1.0E-34
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Swissprot ID Swissprot Description Start End E-value
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 44 517 3.0E-42
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 37 527 5.0E-39
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 36 528 2.0E-37
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 44 506 5.0E-36
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 31 543 1.0E-34
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 66 515 4.0E-30
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 64 399 3.0E-27
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 64 379 5.0E-26
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 39 517 5.0E-24
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 43 518 2.0E-23
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 63 515 4.0E-20
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 22 513 1.0E-19
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 78 507 5.0E-17
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 70 517 1.0E-16
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 63 356 1.0E-16
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 78 391 3.0E-15
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 23 543 6.0E-13
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 66 457 3.0E-12
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 64 537 3.0E-10
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 68 283 9.0E-10
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 38 273 2.0E-08
sp|P0CF20|YO163_YEAST Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 153 288 7.0E-07
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GO

GO Term Description Terminal node
GO:0022857 transmembrane transporter activity Yes
GO:0055085 transmembrane transport Yes
GO:0009987 cellular process No
GO:0051234 establishment of localization No
GO:0008150 biological_process No
GO:0005215 transporter activity No
GO:0003674 molecular_function No
GO:0051179 localization No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 52 0.45

Transmembrane Domains

Domain # Start End Length
1 79 98 19
2 118 140 22
3 147 169 22
4 174 196 22
5 209 231 22
6 236 258 22
7 315 337 22
8 347 369 22
9 382 404 22
10 408 430 22
11 443 465 22
12 470 492 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4237
MAPSERVLSPSFAQTGGRELDFDESDDGGGDDGGGAEEEEEEEEEEEVELMVARSTATTTKLFTADEEREVCRLL
DRKLVLFVALLYMLSFLDRSNIGNARIGGMDDHLQTTPPRNDWYDWCLTAFYLSYISFEWLALLWRFVPAHVLVS
SFVLVWGVAASLQAVAPSYPFLVALRVVLALGEAGFTGLPLYLALFFRRDELALRTAVFISAAPLASSFASALAW
LILRFATLSPIAPWRLLFLAEGFPSVMASVFAWTMIPDSPQTASFLSSRQRRVAHVRLLSDSPLHHHHHHHHHHH
HHHHHQTHVLADPVIWIAAAIFFLANMAYASLPVFLPLLVKDMGHGSVVAQALSAPPFLFAFVTVLVTARASDRL
RDRTAPLVAHAVASASGYALLAAAPFLGLPPLLRYLALFPAAAGFFSVVTLIITWNINNQPGRHRQGAAFALMQF
VGQCGPLIGTRLYPARHAPFYTPGMLVCACAMSAVAVLGLILRRLLRRHNRHMDRADDDKLAEERERLVGHGRGD
PTAAMTTTTTTTGRFRYML
Coding >Ophio5|4237
ATGGCACCGAGTGAGCGGGTGTTGAGCCCGTCTTTTGCGCAGACGGGTGGTCGCGAGCTGGATTTCGACGAGTCC
GATGATGGTGGTGGTGATGATGGTGGTGGTGCAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTTGAGTTG
ATGGTGGCGCGGTCGACTGCGACGACGACGAAGCTGTTTACTGCGGATGAGGAGCGTGAGGTGTGTCGGTTACTG
GACCGAAAATTGGTTCTTTTCGTCGCTCTGCTTTACATGCTCAGCTTTCTCGACCGATCCAACATAGGCAACGCT
CGCATCGGCGGCATGGACGACCATCTCCAAACGACACCTCCCCGAAACGACTGGTACGACTGGTGCCTGACGGCC
TTTTACCTATCCTACATCAGTTTCGAATGGCTCGCGCTACTATGGCGTTTCGTCCCCGCCCACGTACTGGTCTCG
TCCTTCGTCTTGGTCTGGGGTGTCGCTGCTTCCTTGCAGGCTGTCGCGCCGTCGTATCCCTTTCTTGTGGCCTTG
CGTGTTGTGCTGGCTTTGGGTGAGGCTGGCTTCACCGGCTTGCCGCTTTATCTTGCCTTGTTCTTTAGGAGGGAT
GAGTTGGCGCTGAGGACGGCCGTTTTCATCTCCGCTGCTCCGCTGGCTTCGAGCTTCGCTTCTGCTCTCGCTTGG
CTGATCCTTCGGTTCGCGACGCTCAGTCCCATCGCTCCTTGGCGACTCCTCTTTCTCGCCGAGGGCTTCCCTTCC
GTCATGGCCTCCGTCTTTGCCTGGACCATGATCCCCGATTCGCCTCAGACGGCAAGCTTCCTATCCAGTCGCCAA
CGACGGGTGGCCCATGTGCGCCTCCTCTCCGACTCTCCTCTACACCATCACCACCACCACCACCATCATCATCAT
CATCATCATCATCATCAGACACACGTCCTCGCCGACCCCGTCATCTGGATCGCCGCCGCCATCTTCTTTCTCGCC
AACATGGCCTACGCCTCCCTACCCGTCTTCCTCCCCCTCCTCGTCAAGGACATGGGCCACGGATCCGTCGTCGCG
CAGGCCCTCTCCGCACCGCCCTTTCTTTTCGCCTTCGTCACCGTCCTCGTCACCGCTCGTGCTTCCGATCGGCTA
CGTGATCGTACCGCTCCGCTGGTGGCCCACGCCGTAGCCTCGGCTTCCGGTTATGCTTTGCTCGCTGCCGCCCCT
TTCCTTGGCCTGCCGCCCCTGCTGCGCTATCTCGCTCTCTTCCCTGCCGCCGCTGGCTTCTTCTCCGTCGTCACC
CTCATCATCACCTGGAATATCAATAATCAGCCCGGTCGCCATCGTCAGGGCGCCGCCTTTGCCCTCATGCAGTTC
GTCGGCCAGTGTGGGCCTCTCATCGGGACGCGTCTCTATCCCGCCCGCCACGCCCCCTTTTACACGCCCGGCATG
TTGGTTTGTGCCTGTGCTATGAGCGCCGTTGCCGTCTTGGGCCTGATCTTGCGCCGCTTGCTGCGCCGTCACAAC
CGGCACATGGACAGGGCCGACGATGATAAGCTCGCCGAGGAAAGGGAGCGGCTGGTTGGCCATGGCAGGGGGGAT
CCGACGGCGGCTATGACGACGACAACGACAACGACGGGCAGATTCAGATACATGCTG
Transcript >Ophio5|4237
ATGGCACCGAGTGAGCGGGTGTTGAGCCCGTCTTTTGCGCAGACGGGTGGTCGCGAGCTGGATTTCGACGAGTCC
GATGATGGTGGTGGTGATGATGGTGGTGGTGCAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTTGAGTTG
ATGGTGGCGCGGTCGACTGCGACGACGACGAAGCTGTTTACTGCGGATGAGGAGCGTGAGGTGTGTCGGTTACTG
GACCGAAAATTGGTTCTTTTCGTCGCTCTGCTTTACATGCTCAGCTTTCTCGACCGATCCAACATAGGCAACGCT
CGCATCGGCGGCATGGACGACCATCTCCAAACGACACCTCCCCGAAACGACTGGTACGACTGGTGCCTGACGGCC
TTTTACCTATCCTACATCAGTTTCGAATGGCTCGCGCTACTATGGCGTTTCGTCCCCGCCCACGTACTGGTCTCG
TCCTTCGTCTTGGTCTGGGGTGTCGCTGCTTCCTTGCAGGCTGTCGCGCCGTCGTATCCCTTTCTTGTGGCCTTG
CGTGTTGTGCTGGCTTTGGGTGAGGCTGGCTTCACCGGCTTGCCGCTTTATCTTGCCTTGTTCTTTAGGAGGGAT
GAGTTGGCGCTGAGGACGGCCGTTTTCATCTCCGCTGCTCCGCTGGCTTCGAGCTTCGCTTCTGCTCTCGCTTGG
CTGATCCTTCGGTTCGCGACGCTCAGTCCCATCGCTCCTTGGCGACTCCTCTTTCTCGCCGAGGGCTTCCCTTCC
GTCATGGCCTCCGTCTTTGCCTGGACCATGATCCCCGATTCGCCTCAGACGGCAAGCTTCCTATCCAGTCGCCAA
CGACGGGTGGCCCATGTGCGCCTCCTCTCCGACTCTCCTCTACACCATCACCACCACCACCACCATCATCATCAT
CATCATCATCATCATCAGACACACGTCCTCGCCGACCCCGTCATCTGGATCGCCGCCGCCATCTTCTTTCTCGCC
AACATGGCCTACGCCTCCCTACCCGTCTTCCTCCCCCTCCTCGTCAAGGACATGGGCCACGGATCCGTCGTCGCG
CAGGCCCTCTCCGCACCGCCCTTTCTTTTCGCCTTCGTCACCGTCCTCGTCACCGCTCGTGCTTCCGATCGGCTA
CGTGATCGTACCGCTCCGCTGGTGGCCCACGCCGTAGCCTCGGCTTCCGGTTATGCTTTGCTCGCTGCCGCCCCT
TTCCTTGGCCTGCCGCCCCTGCTGCGCTATCTCGCTCTCTTCCCTGCCGCCGCTGGCTTCTTCTCCGTCGTCACC
CTCATCATCACCTGGAATATCAATAATCAGCCCGGTCGCCATCGTCAGGGCGCCGCCTTTGCCCTCATGCAGTTC
GTCGGCCAGTGTGGGCCTCTCATCGGGACGCGTCTCTATCCCGCCCGCCACGCCCCCTTTTACACGCCCGGCATG
TTGGTTTGTGCCTGTGCTATGAGCGCCGTTGCCGTCTTGGGCCTGATCTTGCGCCGCTTGCTGCGCCGTCACAAC
CGGCACATGGACAGGGCCGACGATGATAAGCTCGCCGAGGAAAGGGAGCGGCTGGTTGGCCATGGCAGGGGGGAT
CCGACGGCGGCTATGACGACGACAACGACAACGACGGGCAGATTCAGATACATGCTGTAG
Gene >Ophio5|4237
ATGGCACCGAGTGAGCGGGTGTTGAGCCCGTCTTTTGCGCAGACGGGTGGTCGCGAGCTGGATTTCGACGAGTCC
GATGATGGTGGTGGTGATGATGGTGGTGGTGCAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTTGAGTTG
ATGGTGGCGCGGTCGACTGCGACGACGACGAAGCTGTTTACTGCGGATGAGGAGCGTGAGGTGTGTCGGTTACTG
GACCGAAAATTGGTTCTTTTCGTCGCTCTGCTTTACATGCTCAGCTTTCTCGACCGATCCAGTACGATTCCCCCC
CTCCCCCCCTTTTCCCTCTTTTCCCATGAACCCAAACAAGACGCCATACTCACGAGGGTGCCCTTCCCTCCCCTT
CCCCTTTTCCCAAAAAAAAAAAAAAATGCAGACATAGGCAACGCTCGCATCGGCGGCATGGACGACCATCTCCAA
ACGACACCTCCCCGAAACGACTGGTACGACTGGTGCCTGACGGCCTTTTACCTATCCTACATCAGTTTCGAATGG
CTCGCGCTACTATGGCGTTTCGTCCCCGCCCACGTACTGGTCTCGTCCTTCGTCTTGGTCTGGGGTGTCGCTGCT
TCCTTGCAGGCTGTCGCGCCGTCGTATCCCTTTCTTGTGGCCTTGCGTGTTGTGCTGGCTTTGGGTGAGGCTGGC
TTCACCGGCTTGCCGCTTTATCTTGCCTTGTTCTTTAGGAGGGATGAGTTGGCGCTGAGGACGGCCGTTTTCATC
TCCGGTTAGTGGTTTTTTTTTTTTTTTTTTTTTTTGCGTCCATGAGGCCGGAGGATATAAGCTTGTTATCGTGAG
GTGGCAAAACATGCATCATTTCCCCTTGAAGAGATATGAGGCTGACGAAAAGGGGGGGGAGTTGGTTGAATCAGC
TGCTCCGCTGGCTTCGAGCTTCGCTTCTGCTCTCGCTTGGCTGATCCTTCGGTTCGCGACGCTCAGTCCCATCGC
TCCTTGGCGACTCCTCTTTCTCGCCGAGGGCTTCCCTTCCGTCATGGCCTCCGTCTTTGCCTGGACCATGATCCC
CGATTCGCCTCAGACGGCAAGCTTCCTATCCAGTCGCCAACGACGGGTGGCCCATGTGCGCCTCCTCTCCGACTC
TCCTCTACACCATCACCACCACCACCACCATCATCATCATCATCATCATCATCATCAGACACACGTCCTCGCCGA
CCCCGTCATCTGGATCGCCGCCGCCATCTTCTTTCTCGCCAACATGGCCTACGCCTCCCTACCCGTCTTCCTCCC
CCTCCTCGTCAAGGACATGGGCCACGGATCCGTCGTCGCGCAGGCCCTCTCCGCACCGCCCTTTCTTTTCGCCTT
CGTCACCGTCCTCGTCACCGCTCGTGCTTCCGATCGGCTACGTGATCGTACCGCTCCGCTGGTGGCCCACGCCGT
AGCCTCGGCTTCCGGTTATGCTTTGCTCGCTGCCGCCCCTTTCCTTGGCCTGCCGCCCCTGCTGCGCTATCTCGC
TCTCTTCCCTGCCGCCGCTGGCTTCTTCTCCGTCGTCACCCTCATCATCACCTGGAATATCAATAATCAGCCCGG
TCGCCATCGTCAGGGCGCCGCCTTTGCCCTCATGCAGTTCGTCGGCCAGTGTGGGCCTCTCATCGGGACGCGTCT
CTATCCCGCCCGCCACGCCCCCTTTTACACGCCCGGCATGTTGGTTTGTGCCTGTGCTATGAGCGCCGTTGCCGT
CTTGGGCCTGATCTTGCGCCGCTTGCTGCGCCGTCACAACCGGCACATGGACAGGGCCGACGATGATAAGCTCGC
CGAGGAAAGGGAGCGGCTGGTTGGCCATGGCAGGGGGGATCCGACGGCGGCTATGACGACGACAACGACAACGAC
GGGCAGATTCAGATACATGCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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