Protein ID | Ophio5|4224 |
Gene name | |
Location | scaffold_332:144..1240 |
Strand | - |
Gene length (bp) | 1096 |
Transcript length (bp) | 1047 |
Coding sequence length (bp) | 1044 |
Protein length (aa) | 348 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 19 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 16.60 | 6.60 | 26.60 |
CcL | In ants, during behavior modification | 9.41 | 3.12 | 15.69 |
CcD | In ants, recently dead | 12.41 | 4.53 | 20.30 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.069983 | no |
SC16a | CcD | 0.372046 | no |
CcL | CcD | 0.426235 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|4224 MKINSLTVAAALVAGAMAAPSMQAADRQQSSNNQQAAEKQQKVTANNSSNAMLTISKQDLEGICGICDPCLEGDV HGPPEDCKAICSSNGNKKCDRKAADKSAKTGKDSDAHVAGNKVDEKLAETGNDSDAKTPEKRQASELPKAPKKLQ QAAKNLDDAKNNAGKAKNTVNVRQRNVENICAICDPCPNVTKRSLQTPAAATCSLLCQSVLHKDCAAGGGGGGGG GGGGGGGGSSIIINGGNGGNGGSGGGFGNGFGSGFGGGFGNGFGGGNGFGQGGGGGFGQGGGGGFGQGGGGGFGQ GGGNGFGQAFGNGFGNGFGNGFGDGFGQGGGFGQGGGFGQAAVALEAG |
Coding | >Ophio5|4224 ATGAAGATCAACTCTCTCACCGTGGCCGCTGCCCTCGTGGCAGGCGCTATGGCCGCGCCTAGCATGCAGGCCGCA GACAGGCAGCAGTCGTCTAACAACCAGCAGGCCGCCGAGAAGCAGCAAAAGGTCACCGCCAACAACAGCAGCAAC GCCATGCTCACCATCTCTAAGCAGGACCTCGAGGGCATCTGCGGCATCTGCGACCCGTGCCTGGAAGGTGATGTC CACGGCCCGCCCGAGGATTGCAAGGCCATCTGCTCCTCCAACGGCAACAAGAAGTGCGACAGAAAGGCTGCCGAC AAGTCCGCCAAGACTGGCAAGGACTCCGATGCCCACGTCGCCGGTAACAAGGTCGACGAGAAACTCGCCGAAACC GGTAACGACTCGGACGCGAAGACGCCCGAGAAGCGTCAGGCTTCTGAGCTGCCAAAAGCCCCCAAGAAGCTGCAG CAGGCCGCCAAGAATCTGGACGACGCCAAGAACAATGCTGGCAAAGCCAAGAACACAGTCAACGTCCGTCAGCGG AACGTGGAAAACATCTGTGCCATCTGCGACCCCTGCCCCAACGTCACGAAGCGCAGTCTGCAGACTCCGGCAGCA GCCACCTGCTCCCTCCTCTGCCAGTCTGTGCTCCATAAGGACTGTGCCGCCGGTGGCGGCGGCGGCGGCGGCGGC GGCGGCGGCGGCGGTGGTGGTGGCAGCAGCATCATCATCAATGGAGGAAATGGCGGCAACGGTGGCAGCGGCGGC GGCTTTGGCAACGGCTTTGGCAGTGGATTCGGTGGCGGATTCGGCAACGGATTCGGAGGTGGAAACGGCTTCGGC CAAGGAGGAGGCGGCGGCTTCGGTCAAGGAGGCGGCGGAGGCTTCGGCCAAGGAGGCGGCGGAGGCTTTGGTCAA GGAGGTGGCAACGGCTTCGGCCAAGCCTTCGGCAACGGCTTCGGCAACGGCTTCGGCAACGGCTTCGGCGATGGC TTCGGCCAAGGGGGCGGCTTTGGCCAAGGAGGCGGCTTCGGCCAAGCGGCGGTGGCTTTGGAAGCGGGA |
Transcript | >Ophio5|4224 ATGAAGATCAACTCTCTCACCGTGGCCGCTGCCCTCGTGGCAGGCGCTATGGCCGCGCCTAGCATGCAGGCCGCA GACAGGCAGCAGTCGTCTAACAACCAGCAGGCCGCCGAGAAGCAGCAAAAGGTCACCGCCAACAACAGCAGCAAC GCCATGCTCACCATCTCTAAGCAGGACCTCGAGGGCATCTGCGGCATCTGCGACCCGTGCCTGGAAGGTGATGTC CACGGCCCGCCCGAGGATTGCAAGGCCATCTGCTCCTCCAACGGCAACAAGAAGTGCGACAGAAAGGCTGCCGAC AAGTCCGCCAAGACTGGCAAGGACTCCGATGCCCACGTCGCCGGTAACAAGGTCGACGAGAAACTCGCCGAAACC GGTAACGACTCGGACGCGAAGACGCCCGAGAAGCGTCAGGCTTCTGAGCTGCCAAAAGCCCCCAAGAAGCTGCAG CAGGCCGCCAAGAATCTGGACGACGCCAAGAACAATGCTGGCAAAGCCAAGAACACAGTCAACGTCCGTCAGCGG AACGTGGAAAACATCTGTGCCATCTGCGACCCCTGCCCCAACGTCACGAAGCGCAGTCTGCAGACTCCGGCAGCA GCCACCTGCTCCCTCCTCTGCCAGTCTGTGCTCCATAAGGACTGTGCCGCCGGTGGCGGCGGCGGCGGCGGCGGC GGCGGCGGCGGCGGTGGTGGTGGCAGCAGCATCATCATCAATGGAGGAAATGGCGGCAACGGTGGCAGCGGCGGC GGCTTTGGCAACGGCTTTGGCAGTGGATTCGGTGGCGGATTCGGCAACGGATTCGGAGGTGGAAACGGCTTCGGC CAAGGAGGAGGCGGCGGCTTCGGTCAAGGAGGCGGCGGAGGCTTCGGCCAAGGAGGCGGCGGAGGCTTTGGTCAA GGAGGTGGCAACGGCTTCGGCCAAGCCTTCGGCAACGGCTTCGGCAACGGCTTCGGCAACGGCTTCGGCGATGGC TTCGGCCAAGGGGGCGGCTTTGGCCAAGGAGGCGGCTTCGGCCAAGCGGCGGTGGCTTTGGAAGCGGGATAG |
Gene | >Ophio5|4224 ATGAAGATCAACTCTCTCACCGTGGCCGCTGCCCTCGTGGCAGGCGCTATGGCCGCGCCTAGCATGCAGGCCGCA GACAGGCAGCAGTCGTCTAACAACCAGCAGGCCGCCGAGAAGCAGCAAAAGGTCACCGCCAACAACAGCAGCAAC GCCATGCTCACCATCTCTAAGCAGGACCTCGAGGGCATCTGCGGCATCTGCGACCCGTGCCTGGAAGGTGATGTC CACGGCCCGCCCGAGGATTGCAAGGCCATCTGCTCCTCCAACGGCAACAAGAAGTGCGACAGAAAGGCTGCCGAC AAGTCCGCCAAGACTGGCAAGGACTCCGATGCCCACGTCGCCGGTAACAAGGTCGACGAGAAACTCGCCGAAACC GGTAACGACTCGGACGCGAAGACGCCCGAGAAGCGTCAGGCTTCTGAGCTGCCAAAAGCCCCCAAGAAGCTGCAG CAGGCCGCCAAGAATCTGGACGACGCCAAGAACAATGCTGGCAAAGCCAAGAACACAGTCAACGTCCGTCAGCGG AACGTGGAAAACATCTGTGCCATCTGCGACCCCTGCCCCAACGTCACGAAGCGCAGTCTGCAGACTCCGGCAGCA GCCACCTGCTCCCTCCTCTGCCAGTCTGTGCTCCATAAGGACTGTGCCGCCGGTGGCGGCGGCGGCGGCGGCGGC GGCGGCGGCGGCGGTGGTGGTGGCAGCAGCATCATCATCAATGGAGGAAATGGCGGCAACGGTGGCAGCGGCGGC GGCTTTGGCAACGGCTTTGGCAGTGGATTCGGTGGCGGATTCGGCAACGGATTCGGAGGTGGAAACGGCTTCGGC CAAGGAGGAGGCGGCGGCTTCGGTCAAGGAGGCGGCGGAGGCTTCGGCCAAGGAGGCGGCGGAGGCTTTGGTCAA GGAGGTGGCAACGGCTTCGGCCAAGCCTTCGGCAACGGCTTCGGCAACGGCTTCGGCAACGGCTTCGGCGATGGC TTCGGCCAAGGGGGCGGCTTTGGCCAAGGAGGCGGCTTCGGCCAAGGTGGGGGCAGTGGCTTCGGAGACGGCGGT TTCGGCTCTGGAGGCGGCAGCGGCGGTGGCTTTGGAAGCGGGATAG |