Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4222
Gene name
Locationscaffold_331:17668..19673
Strand+
Gene length (bp)2005
Transcript length (bp)1953
Coding sequence length (bp)1950
Protein length (aa) 650

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05686 Glyco_transf_90 Glycosyl transferase family 90 3.3E-11 501 620

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q5K8R6|CXT1_CRYNJ Beta-1,2-xylosyltransferase 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CXT1 PE=1 SV=1 82 625 2.0E-44
sp|Q6UW63|KDEL1_HUMAN KDEL motif-containing protein 1 OS=Homo sapiens GN=KDELC1 PE=1 SV=1 507 618 2.0E-08
sp|Q9JHP7|KDEL1_MOUSE KDEL motif-containing protein 1 OS=Mus musculus GN=Kdelc1 PE=1 SV=1 507 618 2.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 37 0.5

Transmembrane Domains

Domain # Start End Length
1 16 33 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4222
MGNKLLSPTTFRRRPSARYAVVAVFILFAFYAFNRSSREIYVNTSSTSIIRHRVPVQLEKPLQPPSPPSPPTIYP
DQSSADGTNHPIDKLIFDAQRSFAGLLSSESKSLEDAAQAYRRRRGRHPPPGFDKWYEFARSRNAVIVEDFFDQI
YHDLEPFWGMDPLSMRRRASQFEMTINVRNGNASAVSDWFWTKIWLGMIKEIEKYLPDMDIALNAMDEPRIVATW
ENVNKHVKKAAVTRRRPRARSVVSDFQKLPGPNKGDLAPKVPEIKWDETEPYWLIARRGCSPNSLARKAPLQTSF
AEPPAISNDYAVQHLHQGYVSNYSKSNEVCHQPDLQGLQGLLIKPISTKATDVLFPMFGGSKLTVNNEILLPAPM
YWNEEERFTGGQDHGDPWAEKADQVIWRGVATGGRNEDDNWRGFQRHRFVAMNNGTKISLIESGKEKPENFALAE
ERYNVSAQREHKLGKWISDVSDVAFIDLFCDPPQDGWCNYTDFYFEPKPALNMATQFDSKYLPDIDGNSFSGRYL
GFLRSSSLPIKASVWREWHDSRLVPWKHFVPMDNRFSDYYGILDYFIGSNDRDGHDEAAERIASDGKEWAERVLR
KEDMLIYVLRLLLEYARVVDKRRESMGWVDDILKDPSLEQPQPGRWWLLS
Coding >Ophio5|4222
ATGGGCAACAAACTCTTATCCCCGACAACGTTCCGCCGACGGCCCTCGGCCCGGTACGCCGTCGTTGCCGTCTTC
ATCCTCTTCGCCTTCTACGCCTTCAACCGCAGCTCTCGCGAAATCTATGTTAACACTTCCTCCACTTCCATCATA
CGTCACCGAGTTCCTGTTCAACTCGAGAAACCACTGCAGCCGCCGTCTCCGCCGTCGCCGCCTACTATTTACCCC
GACCAATCCTCCGCCGACGGCACGAACCACCCCATCGACAAGCTAATATTCGATGCCCAGCGTTCCTTCGCCGGA
CTGCTCTCCTCTGAGTCAAAGTCGCTGGAAGACGCCGCTCAGGCGTACCGAAGACGCCGCGGCCGCCACCCCCCC
CCGGGTTTCGACAAGTGGTACGAGTTTGCTCGCTCCCGCAATGCCGTCATCGTCGAGGACTTCTTCGACCAGATC
TACCATGACCTCGAGCCCTTCTGGGGAATGGACCCCCTGAGCATGCGCCGTCGGGCGAGCCAATTCGAGATGACC
ATCAATGTCCGCAACGGTAATGCATCGGCGGTCTCGGATTGGTTCTGGACCAAGATATGGCTGGGGATGATCAAG
GAGATTGAAAAGTACCTCCCCGACATGGACATTGCCCTCAACGCAATGGACGAGCCTCGCATTGTCGCTACTTGG
GAGAACGTCAACAAGCACGTCAAGAAGGCGGCCGTAACCCGACGTCGGCCCAGGGCCCGGTCAGTCGTGTCCGAT
TTCCAGAAACTGCCAGGCCCAAACAAGGGCGATTTGGCACCCAAGGTCCCTGAAATCAAGTGGGATGAGACGGAA
CCGTACTGGCTCATCGCCCGCCGCGGCTGCTCCCCGAATAGCCTCGCTCGTAAGGCACCCCTGCAGACGTCTTTT
GCCGAGCCTCCCGCCATCAGCAACGACTACGCCGTTCAACACCTCCACCAGGGCTACGTGTCAAACTACAGCAAG
TCCAATGAAGTCTGTCATCAACCCGACCTGCAGGGCCTGCAGGGCCTACTCATCAAACCCATCAGCACCAAGGCG
ACCGACGTCCTGTTTCCCATGTTCGGGGGCTCCAAGCTGACGGTCAACAACGAGATTCTTCTGCCCGCCCCCATG
TACTGGAACGAGGAGGAGCGCTTCACCGGCGGCCAGGACCACGGCGATCCCTGGGCGGAAAAGGCCGACCAGGTC
ATCTGGCGCGGCGTTGCCACCGGAGGCAGAAACGAGGACGACAACTGGAGGGGTTTTCAGCGCCATCGCTTCGTG
GCCATGAATAACGGCACCAAGATCTCCCTGATCGAGTCGGGCAAGGAGAAGCCGGAGAATTTTGCGCTGGCCGAG
GAGCGCTACAACGTGAGCGCGCAGAGGGAACACAAACTCGGCAAATGGATTTCCGACGTCTCTGATGTGGCCTTC
ATCGACCTCTTTTGTGACCCTCCACAGGACGGCTGGTGCAATTACACCGACTTTTACTTCGAACCCAAGCCCGCG
CTCAACATGGCGACCCAGTTCGACTCGAAATATCTGCCCGACATTGACGGTAACTCCTTCTCGGGCCGCTACCTC
GGCTTCTTGCGGTCGAGCTCGCTGCCCATTAAGGCGTCCGTCTGGCGCGAGTGGCACGACAGCCGCCTGGTTCCG
TGGAAGCACTTTGTGCCCATGGACAACCGCTTTTCCGACTATTACGGCATTCTCGACTACTTCATCGGCTCCAAC
GACCGTGACGGCCACGACGAGGCCGCCGAGAGGATTGCCTCGGACGGAAAGGAGTGGGCGGAGCGGGTGTTGCGC
AAGGAGGACATGCTGATCTACGTCTTGCGGCTGCTTCTGGAGTATGCTCGCGTCGTCGACAAGAGGAGAGAGTCG
ATGGGCTGGGTCGACGACATACTCAAGGACCCGTCCCTGGAGCAGCCGCAGCCTGGACGGTGGTGGTTGCTGTCG
Transcript >Ophio5|4222
ATGGGCAACAAACTCTTATCCCCGACAACGTTCCGCCGACGGCCCTCGGCCCGGTACGCCGTCGTTGCCGTCTTC
ATCCTCTTCGCCTTCTACGCCTTCAACCGCAGCTCTCGCGAAATCTATGTTAACACTTCCTCCACTTCCATCATA
CGTCACCGAGTTCCTGTTCAACTCGAGAAACCACTGCAGCCGCCGTCTCCGCCGTCGCCGCCTACTATTTACCCC
GACCAATCCTCCGCCGACGGCACGAACCACCCCATCGACAAGCTAATATTCGATGCCCAGCGTTCCTTCGCCGGA
CTGCTCTCCTCTGAGTCAAAGTCGCTGGAAGACGCCGCTCAGGCGTACCGAAGACGCCGCGGCCGCCACCCCCCC
CCGGGTTTCGACAAGTGGTACGAGTTTGCTCGCTCCCGCAATGCCGTCATCGTCGAGGACTTCTTCGACCAGATC
TACCATGACCTCGAGCCCTTCTGGGGAATGGACCCCCTGAGCATGCGCCGTCGGGCGAGCCAATTCGAGATGACC
ATCAATGTCCGCAACGGTAATGCATCGGCGGTCTCGGATTGGTTCTGGACCAAGATATGGCTGGGGATGATCAAG
GAGATTGAAAAGTACCTCCCCGACATGGACATTGCCCTCAACGCAATGGACGAGCCTCGCATTGTCGCTACTTGG
GAGAACGTCAACAAGCACGTCAAGAAGGCGGCCGTAACCCGACGTCGGCCCAGGGCCCGGTCAGTCGTGTCCGAT
TTCCAGAAACTGCCAGGCCCAAACAAGGGCGATTTGGCACCCAAGGTCCCTGAAATCAAGTGGGATGAGACGGAA
CCGTACTGGCTCATCGCCCGCCGCGGCTGCTCCCCGAATAGCCTCGCTCGTAAGGCACCCCTGCAGACGTCTTTT
GCCGAGCCTCCCGCCATCAGCAACGACTACGCCGTTCAACACCTCCACCAGGGCTACGTGTCAAACTACAGCAAG
TCCAATGAAGTCTGTCATCAACCCGACCTGCAGGGCCTGCAGGGCCTACTCATCAAACCCATCAGCACCAAGGCG
ACCGACGTCCTGTTTCCCATGTTCGGGGGCTCCAAGCTGACGGTCAACAACGAGATTCTTCTGCCCGCCCCCATG
TACTGGAACGAGGAGGAGCGCTTCACCGGCGGCCAGGACCACGGCGATCCCTGGGCGGAAAAGGCCGACCAGGTC
ATCTGGCGCGGCGTTGCCACCGGAGGCAGAAACGAGGACGACAACTGGAGGGGTTTTCAGCGCCATCGCTTCGTG
GCCATGAATAACGGCACCAAGATCTCCCTGATCGAGTCGGGCAAGGAGAAGCCGGAGAATTTTGCGCTGGCCGAG
GAGCGCTACAACGTGAGCGCGCAGAGGGAACACAAACTCGGCAAATGGATTTCCGACGTCTCTGATGTGGCCTTC
ATCGACCTCTTTTGTGACCCTCCACAGGACGGCTGGTGCAATTACACCGACTTTTACTTCGAACCCAAGCCCGCG
CTCAACATGGCGACCCAGTTCGACTCGAAATATCTGCCCGACATTGACGGTAACTCCTTCTCGGGCCGCTACCTC
GGCTTCTTGCGGTCGAGCTCGCTGCCCATTAAGGCGTCCGTCTGGCGCGAGTGGCACGACAGCCGCCTGGTTCCG
TGGAAGCACTTTGTGCCCATGGACAACCGCTTTTCCGACTATTACGGCATTCTCGACTACTTCATCGGCTCCAAC
GACCGTGACGGCCACGACGAGGCCGCCGAGAGGATTGCCTCGGACGGAAAGGAGTGGGCGGAGCGGGTGTTGCGC
AAGGAGGACATGCTGATCTACGTCTTGCGGCTGCTTCTGGAGTATGCTCGCGTCGTCGACAAGAGGAGAGAGTCG
ATGGGCTGGGTCGACGACATACTCAAGGACCCGTCCCTGGAGCAGCCGCAGCCTGGACGGTGGTGGTTGCTGTCG
TGA
Gene >Ophio5|4222
ATGGGCAACAAACTCTTATCCCCGACAACGTTCCGCCGACGGCCCTCGGCCCGGTACGCCGTCGTTGCCGTCTTC
ATCCTCTTCGCCTTCTACGCCTTCAACCGCAGCTCTCGCGAAATCTATGTTAACACTTCCTCCACTTCCATCATA
CGTCACCGAGTTCCTGTTCAACTCGAGAAACCACTGCAGCCGCCGTCTCCGCCGTCGCCGCCTACTATTTACCCC
GACCAATCCTCCGCCGACGGCACGAACCACCCCATCGACAAGCTAATATTCGATGCCCAGCGTTCCTTCGCCGGA
CTGCTCTCCTCTGAGTCAAAGTCGCTGGAAGACGCCGCTCAGGCGTACCGAAGACGCCGCGGCCGCCACCCCCCC
CCGGGTTTCGACAAGTGGTACGAGTTTGCTCGCTCCCGCAATGCCGTCATCGTCGAGGACTTCTTCGACCAGATC
TACCATGACCTCGAGCCCTTCTGGGGAATGGACCCCCTGAGCATGCGCCGTCGGGCGAGCCAATTCGAGATGACC
ATCAATGTCCGCAACGGTAATGCATCGGCGGTCTCGGATTGGTTCTGGACCAAGATATGGCTGGGGATGATCAAG
GAGATTGAAAAGTACCTCCCCGACATGGACATTGCCCTCAACGCAATGGACGAGCCTCGCATTGTCGCTACTTGG
GAGAACGTCAACAAGCACGTCAAGAAGGCGGCCGTAACCCGACGTCGGCCCAGGGCCCGGTCAGTCGTGTCCGAT
TTCCAGAAACTGCCAGGCCCAAACAAGGGCGATTTGGCACCCAAGGTCCCTGAAATCAAGTGGGATGAGACGGGT
AAGTCGACGGAAAACAAGAAGATCAGACGCTAAGGCTAACAAAATCAAAGAACCGTACTGGCTCATCGCCCGCCG
CGGCTGCTCCCCGAATAGCCTCGCTCGTAAGGCACCCCTGCAGACGTCTTTTGCCGAGCCTCCCGCCATCAGCAA
CGACTACGCCGTTCAACACCTCCACCAGGGCTACGTGTCAAACTACAGCAAGTCCAATGAAGTCTGTCATCAACC
CGACCTGCAGGGCCTGCAGGGCCTACTCATCAAACCCATCAGCACCAAGGCGACCGACGTCCTGTTTCCCATGTT
CGGGGGCTCCAAGCTGACGGTCAACAACGAGATTCTTCTGCCCGCCCCCATGTACTGGAACGAGGAGGAGCGCTT
CACCGGCGGCCAGGACCACGGCGATCCCTGGGCGGAAAAGGCCGACCAGGTCATCTGGCGCGGCGTTGCCACCGG
AGGCAGAAACGAGGACGACAACTGGAGGGGTTTTCAGCGCCATCGCTTCGTGGCCATGAATAACGGCACCAAGAT
CTCCCTGATCGAGTCGGGCAAGGAGAAGCCGGAGAATTTTGCGCTGGCCGAGGAGCGCTACAACGTGAGCGCGCA
GAGGGAACACAAACTCGGCAAATGGATTTCCGACGTCTCTGATGTGGCCTTCATCGACCTCTTTTGTGACCCTCC
ACAGGACGGCTGGTGCAATTACACCGACTTTTACTTCGAACCCAAGCCCGCGCTCAACATGGCGACCCAGTTCGA
CTCGAAATATCTGCCCGACATTGACGGTAACTCCTTCTCGGGCCGCTACCTCGGCTTCTTGCGGTCGAGCTCGCT
GCCCATTAAGGCGTCCGTCTGGCGCGAGTGGCACGACAGCCGCCTGGTTCCGTGGAAGCACTTTGTGCCCATGGA
CAACCGCTTTTCCGACTATTACGGCATTCTCGACTACTTCATCGGCTCCAACGACCGTGACGGCCACGACGAGGC
CGCCGAGAGGATTGCCTCGGACGGAAAGGAGTGGGCGGAGCGGGTGTTGCGCAAGGAGGACATGCTGATCTACGT
CTTGCGGCTGCTTCTGGAGTATGCTCGCGTCGTCGACAAGAGGAGAGAGTCGATGGGCTGGGTCGACGACATACT
CAAGGACCCGTCCCTGGAGCAGCCGCAGCCTGGACGGTGGTGGTTGCTGTCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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