Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4220
Gene name
Locationscaffold_331:13913..14853
Strand-
Gene length (bp)940
Transcript length (bp)723
Coding sequence length (bp)720
Protein length (aa) 240

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

Domain # Start End Length
1 107 129 22
2 149 171 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4220
MIPESLITNIIDMCGLCSGAQAVAETLQCVEQLELDADKFRGQEARQSRGPELQIDKTKSKLRALPGIRRGLTDY
WKAHKKHIDFARVAKFAGNRVKLSSQFIVKAIAPISFGLGLTRAAALTAFIPIVRCVSEDRANKEAGQRECCRLC
RLHLGDVLLFTPMAWVGVVIAPLRTLIGYFKNSSPEPKDVRYFFKSEIMLSTASTQRDHFCQNNKFISEVIAVEF
AAAKELSVAYITSKI
Coding >Ophio5|4220
ATGATTCCCGAATCTCTCATCACCAACATCATTGACATGTGTGGCTTGTGCAGTGGGGCGCAAGCAGTTGCCGAA
ACACTGCAATGTGTTGAGCAATTGGAGCTGGACGCCGACAAGTTTCGCGGTCAAGAAGCACGACAGTCTCGTGGC
CCCGAACTTCAGATTGACAAAACCAAAAGCAAGCTTCGAGCGTTGCCCGGAATACGCAGAGGTCTGACAGACTAC
TGGAAGGCGCACAAGAAACACATCGACTTCGCACGTGTTGCCAAGTTCGCCGGCAACCGCGTCAAGTTGTCGTCC
CAGTTCATTGTCAAGGCCATAGCGCCCATAAGTTTTGGACTTGGCCTCACGCGGGCAGCGGCTCTTACGGCCTTT
ATTCCCATCGTGAGATGCGTCTCAGAGGACCGGGCGAACAAGGAAGCCGGCCAACGGGAATGCTGTCGACTTTGT
CGCCTGCACCTCGGTGATGTGTTGCTCTTCACCCCCATGGCCTGGGTTGGAGTTGTCATTGCACCGTTAAGAACC
CTTATCGGTTATTTCAAGAACTCAAGCCCGGAACCCAAAGATGTCAGGTACTTCTTTAAATCCGAAATCATGTTA
TCAACCGCCTCGACCCAGCGGGACCACTTCTGCCAAAACAATAAGTTCATTTCCGAGGTGATCGCCGTCGAGTTC
GCCGCGGCTAAAGAGCTCTCCGTTGCGTACATAACTTCTAAAATT
Transcript >Ophio5|4220
ATGATTCCCGAATCTCTCATCACCAACATCATTGACATGTGTGGCTTGTGCAGTGGGGCGCAAGCAGTTGCCGAA
ACACTGCAATGTGTTGAGCAATTGGAGCTGGACGCCGACAAGTTTCGCGGTCAAGAAGCACGACAGTCTCGTGGC
CCCGAACTTCAGATTGACAAAACCAAAAGCAAGCTTCGAGCGTTGCCCGGAATACGCAGAGGTCTGACAGACTAC
TGGAAGGCGCACAAGAAACACATCGACTTCGCACGTGTTGCCAAGTTCGCCGGCAACCGCGTCAAGTTGTCGTCC
CAGTTCATTGTCAAGGCCATAGCGCCCATAAGTTTTGGACTTGGCCTCACGCGGGCAGCGGCTCTTACGGCCTTT
ATTCCCATCGTGAGATGCGTCTCAGAGGACCGGGCGAACAAGGAAGCCGGCCAACGGGAATGCTGTCGACTTTGT
CGCCTGCACCTCGGTGATGTGTTGCTCTTCACCCCCATGGCCTGGGTTGGAGTTGTCATTGCACCGTTAAGAACC
CTTATCGGTTATTTCAAGAACTCAAGCCCGGAACCCAAAGATGTCAGGTACTTCTTTAAATCCGAAATCATGTTA
TCAACCGCCTCGACCCAGCGGGACCACTTCTGCCAAAACAATAAGTTCATTTCCGAGGTGATCGCCGTCGAGTTC
GCCGCGGCTAAAGAGCTCTCCGTTGCGTACATAACTTCTAAAATTTAA
Gene >Ophio5|4220
ATGAGTGAGAAACAGAGCGCGTAATAATAACGATTTTCTTGTCCTGCTGACGGAGATTAGTTCCCGAATCTCTCA
TCACCAACATCATTGACATGTGTGGCTTGTGCAGTGGGGCGCAAGCAGTTGCCGAAACACTGCAATGTGTTGAGC
AAGTGCGTCTTATGATCTACACCTATTCCTCGTCACGGGCAAAGGGCACTGATGCGGCAGGTCGCATAGTTGGAG
CTGGACGCCGACAAGTTTCGCGGTCAAGAAGCACGACAGTCTCGTGGCCCCGAACTTCAGATTGACAAAACCAAA
AGCAAGCTTCGAGCGTTGCCCGGAATACGCAGAGGTCTGACAGACTACTGGAAGGCGCACAAGAAACACATCGAC
TTCGCACGTGTTGCCAAGTTCGCCGGCAACCGCGTCAAGTTGTCGTCCCAGTTCATTGTCAAGGCCATAGCGCCC
ATAAGTTTTGGACTTGGCCTCACGGTACTCAGGCGTTTACGACACCTTCTCGAAAGACGATACCATACTAAAGCG
GGCAGCGGCTCTTACGGCCTTTATTCCCATCGTGAGATGCGTCTCAGAGGACCGGGCGAACAAGGAAGCCGGCCA
ACGGGAATGCTGTCGACTTTGTCGCCTGCACCTCGGTGATGTGTTGCTCTTCACCCCCATGGCCTGGGTTGGAGT
TGTCATTGCACCGTTAAGAACCCTTATCGGTTATTTCAAGAACTCAAGCCCGGAACCCAAAGATGTCAGGTACTT
CTTTAAATCCGAAATCATGTTATCAACCGCCTCGACCCAGCGGGACCACTTCTGCCAAAACGTACGTGATTATAT
GAGATTAACGAGATTTAGAAATCTCAACCAGAATAAGTTCATTTCCGAGGTGATCGCCGTCGAGTTCGCCGCGGC
TAAAGAGCTCTCCGTTGCGTACATAACTTCTAAAATTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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