Protein ID | Ophio5|4195 |
Gene name | |
Location | scaffold_33:41759..44544 |
Strand | - |
Gene length (bp) | 2785 |
Transcript length (bp) | 2463 |
Coding sequence length (bp) | 2460 |
Protein length (aa) | 820 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 30 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 29 | 22 |
2 | 710 | 732 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 3.79 | 1.26 | 6.32 |
CcL | In ants, during behavior modification | 0.24 | 0.00 | 0.62 |
CcD | In ants, recently dead | 0.08 | 0.00 | 0.25 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.008884 | yes |
SC16a | CcD | 0.080753 | no |
CcL | CcD | 1.000000 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|4195 MPELTVAYVAGLMAFAIFLARIITPNALAYICSKLLGFQNSAATWTTSSKVLQQSNWPFLLQSDDSYDDSVRWSV LWISRLMPAVSILLSVASVVTPMGLYPSTGEGKPVEATFVYAPDPTAFGLHGTLSRSNYSMNRACGSVSYANVSF RYNAKPCPLSKNGDDTFMPSSDPTRPSSLCCLDVDLPASIRDIYSSGYRNSTVSNALDIQWRQYALTTRPGYLNG SAYIVGRYRNVESLLFEEGLTLVEGLIVDTAKGGIGFRNHTVPIGFPRTVTWEEDLLFIEPETVCVDTNLTLDYT QDVRFNWGPWPVSRVELTDRGGFSNLDLTMPSVDLSDPQKNPDLRGRAFAAAWMHNVVSAMWFNVTDPTLPLTHV NSTINQSYSYAGALMTGYPDFSLSKNYYNEFWVYQGRPGVHVFARDASSPGDYNTTFKLRLENYTLINDICRGIN ESSPATSSNILISCGLLQSIPQREDGGDAFAQEDGTQWMKKLFSCASATKATIKTVTLSYNNTGDNLFDGLKVMS ARDKEYADEGSMPLWGVEDVGNEYLAGEIGLIWGLVSPEQEGRANVTTYRQPSLYLPGRMSTKSHQIPFMSDGDA LAGSDFASNMWLGTYCNNLDREARNLVSFEDCDVKQKYEASANMAMWTKWQKLTARAETASRVPNLIFTDFSASA VVGTKNALGLASTRKRPRFLVTPEILVIRYKLPYAVPAIISAVFVCLILCASVVLTCTGKDGLAGIRQHVQRLAP GRIYTTLLAPAGEGSDLAMQSKDWSARFGGQLIDLSRDHPIAMQKMAPGDSAGEEEEPEEEMDTVTHHTR |
Coding | >Ophio5|4195 ATGCCTGAGTTAACAGTTGCCTACGTCGCGGGTCTGATGGCCTTTGCCATTTTTCTTGCTCGAATCATTACTCCC AATGCTCTCGCTTATATTTGCTCGAAGCTTCTGGGATTCCAAAACTCGGCAGCCACCTGGACAACCAGCTCCAAG GTGTTGCAGCAATCGAATTGGCCATTTCTCCTCCAGTCCGACGACTCGTATGATGACAGCGTACGCTGGAGCGTT CTCTGGATTTCCAGATTGATGCCTGCTGTCAGCATATTGCTTTCCGTTGCTTCCGTCGTCACCCCCATGGGCCTG TATCCCTCTACCGGTGAAGGCAAGCCTGTGGAAGCAACGTTCGTTTACGCACCAGATCCCACAGCCTTTGGTCTG CACGGGACGTTGAGTCGGAGCAACTACTCTATGAATCGGGCTTGCGGGAGCGTGTCCTATGCCAACGTTTCCTTT CGTTATAATGCCAAGCCCTGTCCACTTTCCAAGAACGGCGATGACACGTTCATGCCCTCGTCGGATCCCACCAGG CCAAGCTCTCTTTGCTGTCTCGACGTGGACCTGCCGGCGTCTATAAGGGACATTTACTCGAGCGGCTATCGCAAC TCGACCGTTTCCAATGCCTTGGACATTCAATGGCGGCAGTACGCTCTGACAACCAGACCGGGCTACCTGAACGGG TCTGCCTACATTGTCGGTCGCTACAGAAATGTGGAAAGTCTCCTGTTCGAAGAGGGACTGACACTGGTCGAGGGG TTGATCGTCGACACCGCCAAGGGCGGAATTGGGTTTCGAAACCACACCGTACCTATAGGCTTCCCACGCACAGTC ACTTGGGAGGAAGACCTCCTCTTTATTGAACCGGAGACTGTCTGCGTCGATACCAACCTAACACTGGATTACACC CAGGACGTCAGGTTCAACTGGGGCCCGTGGCCCGTCTCACGAGTTGAGCTGACCGATCGAGGTGGATTCTCTAAT CTTGACCTGACGATGCCTTCCGTGGACTTGAGTGACCCGCAGAAGAACCCCGATCTGCGAGGACGGGCTTTCGCC GCAGCTTGGATGCACAACGTGGTGAGTGCCATGTGGTTCAACGTGACGGATCCGACGCTGCCCCTGACGCACGTC AACTCCACCATCAATCAGTCCTACTCGTACGCAGGGGCTCTTATGACAGGCTATCCCGACTTTTCTCTTTCCAAG AACTATTACAATGAATTCTGGGTCTACCAGGGAAGGCCTGGTGTTCATGTTTTTGCTCGGGATGCTTCGAGCCCT GGAGACTACAATACCACATTCAAGCTGAGGTTAGAGAACTACACTCTTATCAACGACATATGCCGTGGCATCAAC GAATCCTCCCCTGCCACGTCCAGCAACATCTTGATCAGCTGTGGTCTGCTGCAGAGTATCCCACAGCGTGAAGAT GGAGGAGACGCATTCGCACAAGAAGACGGTACCCAGTGGATGAAGAAGTTGTTCTCGTGCGCCTCTGCGACCAAG GCGACAATCAAGACTGTTACACTGTCGTACAACAACACGGGTGACAACCTATTCGACGGGCTCAAGGTCATGAGC GCCAGAGATAAAGAGTATGCCGACGAGGGTAGCATGCCACTATGGGGTGTAGAGGACGTCGGAAACGAATATCTG GCTGGCGAGATAGGGCTGATCTGGGGTCTCGTCTCTCCTGAGCAAGAGGGGAGAGCCAATGTCACGACCTATCGT CAACCGTCACTCTACCTCCCGGGACGAATGTCAACTAAGAGCCATCAAATCCCCTTCATGTCCGACGGAGATGCC CTGGCCGGCAGCGACTTTGCCTCCAACATGTGGCTAGGAACCTACTGCAATAACCTGGACCGGGAGGCCAGAAAC CTGGTCAGCTTCGAGGACTGCGACGTCAAACAGAAATACGAGGCTTCGGCCAACATGGCCATGTGGACCAAGTGG CAGAAGCTGACGGCGAGGGCCGAAACGGCATCTCGAGTCCCGAACCTGATATTCACCGACTTTTCTGCCTCTGCC GTCGTCGGCACCAAGAACGCCTTGGGCCTGGCATCGACAAGAAAGAGGCCTCGATTCCTCGTTACACCGGAGATT CTGGTCATCAGGTACAAGCTTCCCTACGCCGTGCCGGCCATCATCTCAGCCGTCTTTGTCTGTCTCATCCTCTGC GCCTCCGTCGTCCTCACATGCACCGGGAAGGACGGCCTGGCTGGCATCCGCCAGCATGTTCAGCGGCTTGCGCCA GGCCGAATCTATACCACGCTTCTGGCACCTGCGGGAGAGGGGAGCGACTTGGCCATGCAGAGCAAAGACTGGAGC GCGCGATTTGGCGGCCAGCTCATCGATCTCTCGCGAGACCATCCGATAGCGATGCAGAAAATGGCACCTGGAGAT AGTGCAGGAGAAGAAGAAGAGCCTGAGGAGGAGATGGACACAGTCACTCATCACACAAGG |
Transcript | >Ophio5|4195 ATGCCTGAGTTAACAGTTGCCTACGTCGCGGGTCTGATGGCCTTTGCCATTTTTCTTGCTCGAATCATTACTCCC AATGCTCTCGCTTATATTTGCTCGAAGCTTCTGGGATTCCAAAACTCGGCAGCCACCTGGACAACCAGCTCCAAG GTGTTGCAGCAATCGAATTGGCCATTTCTCCTCCAGTCCGACGACTCGTATGATGACAGCGTACGCTGGAGCGTT CTCTGGATTTCCAGATTGATGCCTGCTGTCAGCATATTGCTTTCCGTTGCTTCCGTCGTCACCCCCATGGGCCTG TATCCCTCTACCGGTGAAGGCAAGCCTGTGGAAGCAACGTTCGTTTACGCACCAGATCCCACAGCCTTTGGTCTG CACGGGACGTTGAGTCGGAGCAACTACTCTATGAATCGGGCTTGCGGGAGCGTGTCCTATGCCAACGTTTCCTTT CGTTATAATGCCAAGCCCTGTCCACTTTCCAAGAACGGCGATGACACGTTCATGCCCTCGTCGGATCCCACCAGG CCAAGCTCTCTTTGCTGTCTCGACGTGGACCTGCCGGCGTCTATAAGGGACATTTACTCGAGCGGCTATCGCAAC TCGACCGTTTCCAATGCCTTGGACATTCAATGGCGGCAGTACGCTCTGACAACCAGACCGGGCTACCTGAACGGG TCTGCCTACATTGTCGGTCGCTACAGAAATGTGGAAAGTCTCCTGTTCGAAGAGGGACTGACACTGGTCGAGGGG TTGATCGTCGACACCGCCAAGGGCGGAATTGGGTTTCGAAACCACACCGTACCTATAGGCTTCCCACGCACAGTC ACTTGGGAGGAAGACCTCCTCTTTATTGAACCGGAGACTGTCTGCGTCGATACCAACCTAACACTGGATTACACC CAGGACGTCAGGTTCAACTGGGGCCCGTGGCCCGTCTCACGAGTTGAGCTGACCGATCGAGGTGGATTCTCTAAT CTTGACCTGACGATGCCTTCCGTGGACTTGAGTGACCCGCAGAAGAACCCCGATCTGCGAGGACGGGCTTTCGCC GCAGCTTGGATGCACAACGTGGTGAGTGCCATGTGGTTCAACGTGACGGATCCGACGCTGCCCCTGACGCACGTC AACTCCACCATCAATCAGTCCTACTCGTACGCAGGGGCTCTTATGACAGGCTATCCCGACTTTTCTCTTTCCAAG AACTATTACAATGAATTCTGGGTCTACCAGGGAAGGCCTGGTGTTCATGTTTTTGCTCGGGATGCTTCGAGCCCT GGAGACTACAATACCACATTCAAGCTGAGGTTAGAGAACTACACTCTTATCAACGACATATGCCGTGGCATCAAC GAATCCTCCCCTGCCACGTCCAGCAACATCTTGATCAGCTGTGGTCTGCTGCAGAGTATCCCACAGCGTGAAGAT GGAGGAGACGCATTCGCACAAGAAGACGGTACCCAGTGGATGAAGAAGTTGTTCTCGTGCGCCTCTGCGACCAAG GCGACAATCAAGACTGTTACACTGTCGTACAACAACACGGGTGACAACCTATTCGACGGGCTCAAGGTCATGAGC GCCAGAGATAAAGAGTATGCCGACGAGGGTAGCATGCCACTATGGGGTGTAGAGGACGTCGGAAACGAATATCTG GCTGGCGAGATAGGGCTGATCTGGGGTCTCGTCTCTCCTGAGCAAGAGGGGAGAGCCAATGTCACGACCTATCGT CAACCGTCACTCTACCTCCCGGGACGAATGTCAACTAAGAGCCATCAAATCCCCTTCATGTCCGACGGAGATGCC CTGGCCGGCAGCGACTTTGCCTCCAACATGTGGCTAGGAACCTACTGCAATAACCTGGACCGGGAGGCCAGAAAC CTGGTCAGCTTCGAGGACTGCGACGTCAAACAGAAATACGAGGCTTCGGCCAACATGGCCATGTGGACCAAGTGG CAGAAGCTGACGGCGAGGGCCGAAACGGCATCTCGAGTCCCGAACCTGATATTCACCGACTTTTCTGCCTCTGCC GTCGTCGGCACCAAGAACGCCTTGGGCCTGGCATCGACAAGAAAGAGGCCTCGATTCCTCGTTACACCGGAGATT CTGGTCATCAGGTACAAGCTTCCCTACGCCGTGCCGGCCATCATCTCAGCCGTCTTTGTCTGTCTCATCCTCTGC GCCTCCGTCGTCCTCACATGCACCGGGAAGGACGGCCTGGCTGGCATCCGCCAGCATGTTCAGCGGCTTGCGCCA GGCCGAATCTATACCACGCTTCTGGCACCTGCGGGAGAGGGGAGCGACTTGGCCATGCAGAGCAAAGACTGGAGC GCGCGATTTGGCGGCCAGCTCATCGATCTCTCGCGAGACCATCCGATAGCGATGCAGAAAATGGCACCTGGAGAT AGTGCAGGAGAAGAAGAAGAGCCTGAGGAGGAGATGGACACAGTCACTCATCACACAAGGTAG |
Gene | >Ophio5|4195 ATGCCTGAGTTAACAGTTGCCTACGTCGCGGGTCTGATGGCCTTTGCCATTTTTCTTGGTATGAACTCGGCTGTC CTATGTTGGTCAACTTGATAGTAAGAACCAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNAAAAGAGAG AGAGAGAGAAACTGACAGACGACGGCGTGATTCCAAGCTCGAATCATTACTCCCAATGCTCTCGCTTATATTTGC TCGAAGCTTCTGGGATTCCAAAACTCGGCAGCCACCTGGTCGGTTTCATTCGTCAGAGCAAATCACGTCGTGCTG ACTTGGAGCCGCAGGACAACCAGCTCCAAGGTGTTGCAGCAATCGAATTGGCCATTTCTCCTCCAGTCCGACGAC TCGTATGATGACAGCGTACGCTGGAGCGTTCTCTGGATTTCCAGATTGATGCCTGCTGTCAGCATATTGCTTTCC GTTGCTTCCGTCGTCACCCCCATGGGCCTGTATCCCTCTACCGGTGAAGGCAAGCCTGTGGAAGCAACGTTCGGT GAGCACATGAAAAAGCTCAAATGATGCTCGTAGCCAGCATCTGACGCTGGCTCAAAGTTTACGCACCAGATCCCA CAGCCTTTGGTCTGCACGGGACGTTGAGTCGGAGCAACTACTCTATGAATCGGGCTTGCGGGAGCGTGTCCTATG CCAACGTTTCCTTTCGTTATAATGCCAAGCCCTGTCCACTTTCCAAGAACGGCGATGACACGTTCATGCCCTCGT CGGATCCCACCAGGCCAAGCTCTCTTTGCTGTCTCGACGTGGACCTGCCGGCGTCTATAAGGGACATTTACTCGA GCGGCTATCGCAACTCGACCGTTTCCAATGCCTTGGACATTCAATGGCGGCAGTACGCTCTGACAACCAGACCGG GCTACCTGAACGGGTCTGCCTACATTGTCGGTCGCTACAGAAATGTGGAAAGTCTCCTGTTCGAAGAGGGACTGA CACTGGTCGAGGGGTTGATCGTCGACACCGCCAAGGGCGGAATTGGGTTTCGAAACCACACCGTACCTATAGGCT TCCCACGCACAGTCACTTGGGAGGAAGACCTCCTCTTTATTGAACCGGAGACTGTCTGCGTCGATACCAACCTAA CACTGGATTACACCCAGGACGTCAGGTTCAACTGGGGCCCGTGGCCCGTCTCACGAGTTGAGCTGACCGATCGAG GTGGATTCTCTAATCTTGACCTGACGATGCCTTCCGTGGACTTGAGTGACCCGCAGAAGAACCCCGATCTGCGAG GACGGGCTTTCGCCGCAGCTTGGATGCACAACGTGGTGAGTGCCATGTGGTTCAACGTGACGGATCCGACGCTGC CCCTGACGCACGTCAACTCCACCATCAATCAGTCCTACTCGTACGCAGGGGCTCTTATGACAGGCTATCCCGACT TTTCTCTTTCCAAGAACTATTACAATGAATTCTGGGTCTACCAGGGAAGGCCTGGTGTTCATGTTTTTGCTCGGG ATGCTTCGAGCCCTGGAGACTACAATACCACATTCAAGCTGAGGTTAGAGAACTACACTCTTATCAGTACGTTTT CAAAGCTATCTAGCCTGTGTGCCGCCGATATCTTTTGAAGAAGCCATGGCGAATCTAACAAAGCATCTTTCTAGA CGACATATGCCGTGGCATCAACGAATCCTCCCCTGCCACGTCCAGCAACATCTTGATCAGCTGTGGTCTGCTGCA GAGTATCCCACAGCGTGAAGATGGAGGAGACGCATTCGCACAAGAAGACGGTACCCAGTGGATGAAGAAGTTGTT CTCGTGCGCCTCTGCGACCAAGGCGACAATCAAGACTGTTACACTGTCGTACAACAACACGGGTGACAACCTATT CGACGGGCTCAAGGTCATGAGCGCCAGAGATAAAGAGTATGCCGACGAGGGTAGCATGCCACTATGGGGTGTAGA GGACGTCGGAAACGAATATCTGGCTGGCGAGATAGGGCTGATCTGGGGTCTCGTCTCTCCTGAGCAAGAGGGGAG AGCCAATGTCACGACCTATCGTCAACCGTCACTCTACCTCCCGGGACGAATGTCAACTAAGAGCCATCAAATCCC CTTCATGTCCGACGGAGATGCCCTGGCCGGCAGCGACTTTGCCTCCAACATGTGGCTAGGAACCTACTGCAATAA CCTGGACCGGGAGGCCAGAAACCTGGTCAGCTTCGAGGACTGCGACGTCAAACAGAAATACGAGGCTTCGGCCAA CATGGCCATGTGGACCAAGTGGCAGAAGCTGACGGCGAGGGCCGAAACGGCATCTCGAGTCCCGAACCTGATATT CACCGACTTTTCTGCCTCTGCCGTCGTCGGCACCAAGAACGCCTTGGGCCTGGCATCGACAAGAAAGAGGCCTCG ATTCCTCGTTACACCGGAGATTCTGGTCATCAGGTACAAGCTTCCCTACGCCGTGCCGGCCATCATCTCAGCCGT CTTTGTCTGTCTCATCCTCTGCGCCTCCGTCGTCCTCACATGCACCGGGAAGGACGGCCTGGCTGGCATCCGCCA GCATGTTCAGCGGCTTGCGCCAGGCCGAATCTATACCACGCTTCTGGCACCTGCGGGAGAGGGGAGCGACTTGGC CATGCAGAGCAAAGACTGGAGCGCGCGATTTGGCGGCCAGCTCATCGATCTCTCGCGAGACCATCCGATAGCGAT GCAGAAAATGGCACCTGGAGATAGTGCAGGAGAAGAAGAAGAGCCTGAGGAGGAGATGGACACAGTCACTCATCA CACAAGGTAG |