Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4193
Gene name
Locationscaffold_33:37463..38014
Strand-
Gene length (bp)551
Transcript length (bp)438
Coding sequence length (bp)435
Protein length (aa) 145

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16541 AltA1 Alternaria alternata allergen 1 1.8E-06 34 131

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4193
MRALGIIIGILAVITMARSLSGTTERIHINDLLLQSTSSDLGTTINHVQFQLTGDEGTNIKCSSSVYKTVPSISI
GGTCSKSTYHFVLWPSIKGNNYLLEVFHNKKAGIVFTGISKPSTHCSPEGSTSFVCRQGPPMRLAIRKDV
Coding >Ophio5|4193
ATGCGCGCTCTCGGGATAATTATTGGCATCCTAGCCGTCATTACTATGGCCAGATCCTTGAGTGGAACTACCGAG
AGGATTCATATCAACGATCTCCTACTGCAATCGACTTCTTCCGACCTCGGTACCACCATCAACCACGTTCAGTTT
CAACTCACAGGGGACGAGGGCACGAATATCAAGTGCTCAAGTTCTGTGTATAAGACGGTGCCATCCATCTCCATC
GGTGGCACCTGCTCCAAATCTACCTACCACTTCGTCCTCTGGCCCAGCATTAAGGGCAACAACTATTTGCTGGAG
GTGTTCCACAATAAGAAAGCTGGGATCGTTTTTACGGGGATAAGTAAGCCGTCTACTCACTGCTCACCCGAGGGC
AGCACCAGCTTCGTTTGTCGCCAAGGCCCGCCCATGAGACTGGCTATTCGGAAAGACGTG
Transcript >Ophio5|4193
ATGCGCGCTCTCGGGATAATTATTGGCATCCTAGCCGTCATTACTATGGCCAGATCCTTGAGTGGAACTACCGAG
AGGATTCATATCAACGATCTCCTACTGCAATCGACTTCTTCCGACCTCGGTACCACCATCAACCACGTTCAGTTT
CAACTCACAGGGGACGAGGGCACGAATATCAAGTGCTCAAGTTCTGTGTATAAGACGGTGCCATCCATCTCCATC
GGTGGCACCTGCTCCAAATCTACCTACCACTTCGTCCTCTGGCCCAGCATTAAGGGCAACAACTATTTGCTGGAG
GTGTTCCACAATAAGAAAGCTGGGATCGTTTTTACGGGGATAAGTAAGCCGTCTACTCACTGCTCACCCGAGGGC
AGCACCAGCTTCGTTTGTCGCCAAGGCCCGCCCATGAGACTGGCTATTCGGAAAGACGTGTAA
Gene >Ophio5|4193
ATGCGCGCTCTCGGGATAATTATTGGCATCCTAGCCGTCATTACTATGGCCAGATCCTTGAGTGGAACTACCGAG
AGGATTCATATCAACGATCTCCTACTGCAATCGACTTCTTCCGACCTCGGTACCACCATCAACCACGTTCAGTTT
CAACTCACAGGGGACGAGGGCACGAATATCAAGTGCTCAAGTTCTGTGTATAAGACGGTGCCATCCATCTCCATC
GGTGGCACCTGCTCCAAATCTACCTACCACTTCGTCCTCTGGCCCAGCATTAAGGGCAACAACTATTTGCTGGAG
GTGTTCCACAATAAGAAAGCTGGGTAAGACTGAAACGTCGACTCGATTATGAAGAAAAAAAAAAACAGACTCTCT
TCGGAAGTGGGAAATCCATCTCGGAGTCTGCTTTGGCTGACCTGGCTGTCTATCTTTCTAGGATCGTTTTTACGG
GGATAAGTAAGCCGTCTACTCACTGCTCACCCGAGGGCAGCACCAGCTTCGTTTGTCGCCAAGGCCCGCCCATGA
GACTGGCTATTCGGAAAGACGTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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