Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4188
Gene name
Locationscaffold_33:25134..26051
Strand-
Gene length (bp)917
Transcript length (bp)711
Coding sequence length (bp)708
Protein length (aa) 236

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11327 Egh16-like Egh16-like virulence factor 1.1E-45 21 186

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4188
MRSSHTSLFTASCLFHWALCHGVILNAQGNDGSPASVGFQGINPCQQDTTIIRDAEIKDNIVNECGRTQLNGNID
VGENTEQALAANAVTQVQAGGEVQLTIHQVNADGAGPYVCDLDENSNSAMISPKNITMLNNVPGDNGLSLTKTQQ
FNVTIKMPDDLQCTGASTGNVCTVRCRNNAAAGPFGGCFAVQQVDSTPKVNTPANIETKQPLDKINEQMKQNQVN
FEIASKANNTP
Coding >Ophio5|4188
ATGCGGTCCTCGCACACCTCTCTCTTTACTGCTTCGTGTCTCTTTCACTGGGCACTTTGCCATGGAGTGATACTC
AATGCCCAAGGAAACGACGGTTCCCCAGCGAGTGTTGGGTTTCAAGGCATCAACCCTTGCCAACAAGATACAACG
ATTATTCGAGATGCGGAGATCAAAGACAACATTGTGAACGAGTGCGGTCGAACGCAGCTAAACGGAAACATTGAC
GTTGGTGAAAACACCGAACAGGCTCTCGCTGCCAACGCCGTCACGCAGGTTCAGGCCGGGGGCGAGGTTCAACTC
ACAATCCACCAGGTAAACGCCGACGGTGCTGGTCCCTATGTCTGCGACTTGGACGAAAACAGCAACTCGGCAATG
ATTTCACCGAAAAACATCACCATGTTGAATAACGTCCCCGGAGACAATGGACTGTCCTTGACCAAGACACAACAG
TTCAATGTTACTATCAAAATGCCCGATGATCTTCAGTGCACCGGTGCTTCAACGGGCAACGTGTGTACTGTGCGG
TGCCGCAACAATGCTGCAGCTGGGCCATTCGGAGGTTGCTTCGCAGTGCAGCAGGTAGACTCGACGCCAAAAGTG
AACACACCGGCCAATATCGAAACGAAGCAGCCTTTGGATAAGATTAATGAGCAGATGAAACAAAATCAAGTCAAT
TTTGAGATTGCGTCCAAGGCGAACAATACGCCT
Transcript >Ophio5|4188
ATGCGGTCCTCGCACACCTCTCTCTTTACTGCTTCGTGTCTCTTTCACTGGGCACTTTGCCATGGAGTGATACTC
AATGCCCAAGGAAACGACGGTTCCCCAGCGAGTGTTGGGTTTCAAGGCATCAACCCTTGCCAACAAGATACAACG
ATTATTCGAGATGCGGAGATCAAAGACAACATTGTGAACGAGTGCGGTCGAACGCAGCTAAACGGAAACATTGAC
GTTGGTGAAAACACCGAACAGGCTCTCGCTGCCAACGCCGTCACGCAGGTTCAGGCCGGGGGCGAGGTTCAACTC
ACAATCCACCAGGTAAACGCCGACGGTGCTGGTCCCTATGTCTGCGACTTGGACGAAAACAGCAACTCGGCAATG
ATTTCACCGAAAAACATCACCATGTTGAATAACGTCCCCGGAGACAATGGACTGTCCTTGACCAAGACACAACAG
TTCAATGTTACTATCAAAATGCCCGATGATCTTCAGTGCACCGGTGCTTCAACGGGCAACGTGTGTACTGTGCGG
TGCCGCAACAATGCTGCAGCTGGGCCATTCGGAGGTTGCTTCGCAGTGCAGCAGGTAGACTCGACGCCAAAAGTG
AACACACCGGCCAATATCGAAACGAAGCAGCCTTTGGATAAGATTAATGAGCAGATGAAACAAAATCAAGTCAAT
TTTGAGATTGCGTCCAAGGCGAACAATACGCCTTAG
Gene >Ophio5|4188
ATGCGGTCCTCGCACACCTCTCTCTTTACTGCTTCGTGTCTCTTTCACTGGGCACTTTGCCATGGAGTGATACTC
AATGCCCAAGGAAACGACGGTTCCCCAGCGAGTGTTGGGTTTCAAGGTACGGCCATTTCCCCTAATTATGCATGA
ACAAAAGAGTCGCTCATGGTTTTTTTTTTTTCCCTTTTTCCAGTGAACCCAGATGTGGCACGCGACTGCATAGGC
ATCAACCCTTGCCAACAAGATACAACGATTATTCGAGATGCGGAGATCAAAGACAACATTGTGAACGAGTGCGGT
CGAACGCAGCTAAACGGAAACATTGACGTTGGTGAAAACACCGAACAGGCTCTCGCTGCCAACGCCGTCACGCAG
GTTCAGGCCGGGGGCGAGGTTCAACTCACAATCCACCAGGTAAACGCCGACGGTGCTGGTCCCTATGTCTGCGAC
TTGGACGAAAACAGCAACTCGGCAATGATTTCACCGGTAGGGGCACCTTGTTCTATGCACCCCTTCTTCCATACT
AACATGGGTAGAAAAACATCACCATGTTGAATAACGTCCCCGGAGACAATGGACTGTCCTTGACCAAGACACAAC
AGTTCAATGTTACTATCAAAATGCCCGATGATCTTCAGTGCACCGGTGGTAGGTTGCCCTTGAACTCAATGAACC
GACTTTTTTCTAACTCGGCCGTGTTAGCTTCAACGGGCAACGTGTGTACTGTGCGGTGCCGCAACAATGCTGCAG
CTGGGCCATTCGGAGGTTGCTTCGCAGTGCAGCAGGTAGACTCGACGCCAAAAGTGAACACACCGGCCAATATCG
AAACGAAGCAGCCTTTGGATAAGATTAATGAGCAGATGAAACAAAATCAAGTCAATTTTGAGATTGCGTCCAAGG
CGAACAATACGCCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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