Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4175
Gene name
Locationscaffold_329:11558..14285
Strand+
Gene length (bp)2727
Transcript length (bp)2502
Coding sequence length (bp)2499
Protein length (aa) 833

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12722 Hid1 High-temperature-induced dauer-formation protein 9.4E-93 1 218
PF12722 Hid1 High-temperature-induced dauer-formation protein 1.0E-154 248 783
PF09742 Dymeclin Dyggve-Melchior-Clausen syndrome protein 6.0E-20 1 191
PF09742 Dymeclin Dyggve-Melchior-Clausen syndrome protein 2.0E-42 274 735

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|O13776|FT105_SCHPO Ubp5-interacting protein ftp105 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ftp105 PE=1 SV=2 1 755 1.0E-98
sp|Q9P7M6|YIOC_SCHPO Hid-1 family protein P27G11.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAP27G11.12 PE=3 SV=1 1 781 3.0E-69
sp|Q8IV36|HID1_HUMAN Protein HID1 OS=Homo sapiens GN=HID1 PE=1 SV=1 244 784 2.0E-54
sp|Q8R1F6|HID1_MOUSE Protein HID1 OS=Mus musculus GN=Hid1 PE=1 SV=1 244 784 8.0E-54
sp|Q54JJ6|HID1_DICDI Protein HID1 OS=Dictyostelium discoideum GN=hid1 PE=3 SV=1 282 785 5.0E-30
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O13776|FT105_SCHPO Ubp5-interacting protein ftp105 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ftp105 PE=1 SV=2 1 755 1.0E-98
sp|Q9P7M6|YIOC_SCHPO Hid-1 family protein P27G11.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAP27G11.12 PE=3 SV=1 1 781 3.0E-69
sp|Q8IV36|HID1_HUMAN Protein HID1 OS=Homo sapiens GN=HID1 PE=1 SV=1 244 784 2.0E-54
sp|Q8R1F6|HID1_MOUSE Protein HID1 OS=Mus musculus GN=Hid1 PE=1 SV=1 244 784 8.0E-54
sp|Q54JJ6|HID1_DICDI Protein HID1 OS=Dictyostelium discoideum GN=hid1 PE=3 SV=1 282 785 5.0E-30
sp|Q8IV36|HID1_HUMAN Protein HID1 OS=Homo sapiens GN=HID1 PE=1 SV=1 1 203 6.0E-16
sp|Q8R1F6|HID1_MOUSE Protein HID1 OS=Mus musculus GN=Hid1 PE=1 SV=1 1 203 6.0E-15
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 39 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 35.46 19.41 51.51
CcL In ants, during behavior modification 57.99 30.08 85.91
CcD In ants, recently dead 46.77 25.45 68.09

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 0.033046 yes
SC16a CcD 0.230676 no
CcL CcD 0.394535 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4175
MGASDSKIVFKQGIFRLSEERHIPADDTYWTSFWELPESAEDVFSLFSPADIRRTRDRALENIETLVLALTSRLF
ILRHHPSFPDPELAPERDALNCVRILTRIMPYIYEKESLKTWEERFFWGARRKKSRRAAIANEVLFDEAQDGKQD
APAENDEFVDVKPLAEELVDTLIDLLFFSDLTIPRQPHGQSKVTYAIWQSGVGCNTAVSTTKEFENNRNSPAEGG
ADINLSLYLPRQAGRTIGLVFAVEYDTQVQPSKLASPVQHAGIQGPEADTEHAPAQKNFYRHFLGRLHRPQDFQF
IVDGISRILSQPLQDKTSYLPGPQTSGNLTPEMLMLFWELTQCNKRFRSFIIDTDRAHDFVVLTLFHALEYKSDP
AKQGVVRMCAFLLQTLSVETNFGHNLNKRFEGQESLPACIRINGFNGSYTDFLIHSIYCLITSSQGSFAAVYPAL
LAVINNIAPHVEGLSAAGSSQLMHLFSSMSSPAFLLANETNHTLLDSLLESINSIIENKYRQNPELMLAIVKSRK
RIEALRSFTLESGQEELERRSRRRKDVAGNGDNADSGSVRSSLDSARSPPPVPSRMPTLGQVPEDSAFAIGDNEE
DDSDDEPQATPAPSTTSENQSQASSAVNIDDAVPVQLRGMSEKARGKMPAAIRSFSRQNSTTSLGSQPTSGRSQG
GGFEPTAQWIDSWLPELPLHSILTVIQQVTSLVPGREAVSMDAIRRVQEMGLVGVEPSPPHVHSFEWSQPALAWY
ESLLWGMIFTSEMQIAKGTMGMWNGTSIKLFRVQETAPEGPTLTSPRGAVDAVGSNIVSRIGQINLRGGPAQTGG
SSSSRAGA
Coding >Ophio5|4175
ATGGGCGCAAGCGACTCCAAGATCGTCTTCAAGCAGGGCATCTTCAGACTGTCCGAGGAGCGCCACATTCCCGCC
GACGACACCTACTGGACCTCATTCTGGGAGCTTCCCGAGTCGGCGGAAGATGTCTTCAGCCTCTTTTCTCCCGCC
GACATCCGACGCACCCGCGATCGAGCGCTGGAAAATATCGAAACCCTTGTGCTTGCGCTGACGTCGCGCTTGTTC
ATTCTCCGCCATCACCCCTCCTTTCCGGACCCCGAACTGGCGCCCGAGCGGGACGCGCTGAATTGCGTCAGGATT
TTAACACGCATTATGCCATACATTTATGAAAAGGAGAGCCTCAAGACTTGGGAGGAGCGCTTCTTTTGGGGAGCC
CGGCGCAAGAAGAGCCGCCGCGCAGCCATTGCCAATGAGGTCCTGTTCGACGAGGCTCAGGACGGCAAGCAGGAT
GCGCCGGCCGAGAACGACGAATTCGTGGACGTCAAGCCTTTGGCCGAGGAGCTTGTCGACACACTGATAGATCTC
CTTTTCTTTTCTGACCTGACCATTCCGCGCCAGCCTCATGGCCAATCCAAGGTCACCTACGCCATTTGGCAAAGC
GGCGTCGGCTGCAACACGGCCGTTTCCACGACCAAAGAGTTTGAAAATAACAGGAACTCTCCCGCAGAGGGGGGT
GCGGACATTAACCTATCTCTGTACTTGCCACGACAAGCAGGCCGTACTATCGGTCTTGTGTTCGCTGTTGAATAC
GACACTCAAGTACAACCCAGCAAGTTGGCGAGTCCCGTACAACACGCTGGTATTCAGGGACCCGAAGCAGATACT
GAACATGCTCCCGCGCAGAAGAACTTCTATCGACACTTCTTGGGTCGACTTCATCGCCCTCAGGATTTCCAGTTC
ATTGTGGACGGCATCAGCCGAATCCTTAGCCAGCCGTTGCAGGACAAGACTTCCTACCTGCCAGGACCCCAGACG
TCGGGGAACTTGACTCCGGAAATGCTGATGCTCTTTTGGGAGTTGACCCAGTGCAACAAGCGATTTCGATCCTTC
ATCATCGACACCGATCGAGCCCACGACTTTGTCGTCTTGACGCTGTTCCACGCCCTGGAATACAAGAGCGATCCT
GCGAAACAGGGAGTGGTACGCATGTGTGCTTTTCTGTTGCAAACCCTGAGCGTTGAGACCAACTTCGGCCACAAT
CTCAACAAGCGATTCGAAGGCCAGGAGAGTCTTCCCGCATGCATCAGGATCAACGGATTCAACGGGTCCTACACC
GACTTTCTCATTCACTCCATCTATTGCCTGATCACGTCGAGCCAAGGTAGTTTCGCCGCAGTGTATCCTGCGCTT
TTGGCCGTCATCAACAACATTGCACCGCATGTCGAAGGACTGAGCGCCGCGGGCAGCTCTCAGCTTATGCATTTG
TTCTCCTCCATGTCTTCGCCTGCGTTTCTCCTTGCCAATGAAACCAACCACACTCTCCTCGACTCGCTCCTGGAG
TCCATCAACAGCATCATCGAAAACAAGTATCGCCAGAACCCAGAACTGATGCTGGCAATCGTCAAGAGTCGAAAG
CGGATTGAGGCTCTACGGTCCTTTACACTGGAGAGCGGCCAGGAGGAGCTAGAGCGAAGGAGTAGGAGACGAAAA
GACGTCGCCGGCAATGGAGACAACGCCGACTCCGGGTCAGTGAGAAGCTCGCTCGACAGCGCGCGCAGTCCACCG
CCCGTGCCATCCCGGATGCCGACGCTGGGACAGGTGCCTGAAGACAGCGCGTTCGCCATCGGTGACAATGAGGAG
GACGACAGCGACGACGAGCCGCAGGCAACCCCAGCACCTTCCACCACCAGCGAGAACCAGTCTCAGGCATCGTCA
GCCGTCAACATCGACGACGCTGTTCCGGTTCAGCTGCGCGGCATGTCCGAGAAGGCTCGCGGCAAAATGCCAGCG
GCGATCCGGTCGTTTTCGCGCCAGAATAGCACCACAAGTCTGGGATCGCAGCCTACCTCAGGACGGTCTCAAGGA
GGAGGGTTTGAGCCGACGGCGCAGTGGATTGACAGCTGGCTCCCGGAGCTGCCCCTGCATTCCATCCTGACTGTC
ATTCAGCAGGTAACGAGCCTGGTGCCCGGCAGGGAAGCTGTGTCGATGGATGCGATTCGCCGGGTTCAGGAAATG
GGCCTCGTTGGAGTCGAGCCGTCGCCCCCGCACGTGCATTCGTTTGAGTGGTCCCAGCCGGCGCTGGCCTGGTAC
GAGTCGCTCTTGTGGGGGATGATTTTCACGAGCGAGATGCAGATCGCCAAGGGCACCATGGGCATGTGGAACGGC
ACGTCGATTAAGCTCTTCCGAGTCCAGGAGACTGCGCCGGAAGGCCCTACCTTGACGTCTCCGCGGGGAGCTGTC
GATGCTGTGGGGAGCAACATCGTCTCCAGGATCGGCCAGATCAACCTTCGGGGTGGGCCGGCGCAAACCGGCGGC
AGCTCCTCATCAAGGGCTGGAGCC
Transcript >Ophio5|4175
ATGGGCGCAAGCGACTCCAAGATCGTCTTCAAGCAGGGCATCTTCAGACTGTCCGAGGAGCGCCACATTCCCGCC
GACGACACCTACTGGACCTCATTCTGGGAGCTTCCCGAGTCGGCGGAAGATGTCTTCAGCCTCTTTTCTCCCGCC
GACATCCGACGCACCCGCGATCGAGCGCTGGAAAATATCGAAACCCTTGTGCTTGCGCTGACGTCGCGCTTGTTC
ATTCTCCGCCATCACCCCTCCTTTCCGGACCCCGAACTGGCGCCCGAGCGGGACGCGCTGAATTGCGTCAGGATT
TTAACACGCATTATGCCATACATTTATGAAAAGGAGAGCCTCAAGACTTGGGAGGAGCGCTTCTTTTGGGGAGCC
CGGCGCAAGAAGAGCCGCCGCGCAGCCATTGCCAATGAGGTCCTGTTCGACGAGGCTCAGGACGGCAAGCAGGAT
GCGCCGGCCGAGAACGACGAATTCGTGGACGTCAAGCCTTTGGCCGAGGAGCTTGTCGACACACTGATAGATCTC
CTTTTCTTTTCTGACCTGACCATTCCGCGCCAGCCTCATGGCCAATCCAAGGTCACCTACGCCATTTGGCAAAGC
GGCGTCGGCTGCAACACGGCCGTTTCCACGACCAAAGAGTTTGAAAATAACAGGAACTCTCCCGCAGAGGGGGGT
GCGGACATTAACCTATCTCTGTACTTGCCACGACAAGCAGGCCGTACTATCGGTCTTGTGTTCGCTGTTGAATAC
GACACTCAAGTACAACCCAGCAAGTTGGCGAGTCCCGTACAACACGCTGGTATTCAGGGACCCGAAGCAGATACT
GAACATGCTCCCGCGCAGAAGAACTTCTATCGACACTTCTTGGGTCGACTTCATCGCCCTCAGGATTTCCAGTTC
ATTGTGGACGGCATCAGCCGAATCCTTAGCCAGCCGTTGCAGGACAAGACTTCCTACCTGCCAGGACCCCAGACG
TCGGGGAACTTGACTCCGGAAATGCTGATGCTCTTTTGGGAGTTGACCCAGTGCAACAAGCGATTTCGATCCTTC
ATCATCGACACCGATCGAGCCCACGACTTTGTCGTCTTGACGCTGTTCCACGCCCTGGAATACAAGAGCGATCCT
GCGAAACAGGGAGTGGTACGCATGTGTGCTTTTCTGTTGCAAACCCTGAGCGTTGAGACCAACTTCGGCCACAAT
CTCAACAAGCGATTCGAAGGCCAGGAGAGTCTTCCCGCATGCATCAGGATCAACGGATTCAACGGGTCCTACACC
GACTTTCTCATTCACTCCATCTATTGCCTGATCACGTCGAGCCAAGGTAGTTTCGCCGCAGTGTATCCTGCGCTT
TTGGCCGTCATCAACAACATTGCACCGCATGTCGAAGGACTGAGCGCCGCGGGCAGCTCTCAGCTTATGCATTTG
TTCTCCTCCATGTCTTCGCCTGCGTTTCTCCTTGCCAATGAAACCAACCACACTCTCCTCGACTCGCTCCTGGAG
TCCATCAACAGCATCATCGAAAACAAGTATCGCCAGAACCCAGAACTGATGCTGGCAATCGTCAAGAGTCGAAAG
CGGATTGAGGCTCTACGGTCCTTTACACTGGAGAGCGGCCAGGAGGAGCTAGAGCGAAGGAGTAGGAGACGAAAA
GACGTCGCCGGCAATGGAGACAACGCCGACTCCGGGTCAGTGAGAAGCTCGCTCGACAGCGCGCGCAGTCCACCG
CCCGTGCCATCCCGGATGCCGACGCTGGGACAGGTGCCTGAAGACAGCGCGTTCGCCATCGGTGACAATGAGGAG
GACGACAGCGACGACGAGCCGCAGGCAACCCCAGCACCTTCCACCACCAGCGAGAACCAGTCTCAGGCATCGTCA
GCCGTCAACATCGACGACGCTGTTCCGGTTCAGCTGCGCGGCATGTCCGAGAAGGCTCGCGGCAAAATGCCAGCG
GCGATCCGGTCGTTTTCGCGCCAGAATAGCACCACAAGTCTGGGATCGCAGCCTACCTCAGGACGGTCTCAAGGA
GGAGGGTTTGAGCCGACGGCGCAGTGGATTGACAGCTGGCTCCCGGAGCTGCCCCTGCATTCCATCCTGACTGTC
ATTCAGCAGGTAACGAGCCTGGTGCCCGGCAGGGAAGCTGTGTCGATGGATGCGATTCGCCGGGTTCAGGAAATG
GGCCTCGTTGGAGTCGAGCCGTCGCCCCCGCACGTGCATTCGTTTGAGTGGTCCCAGCCGGCGCTGGCCTGGTAC
GAGTCGCTCTTGTGGGGGATGATTTTCACGAGCGAGATGCAGATCGCCAAGGGCACCATGGGCATGTGGAACGGC
ACGTCGATTAAGCTCTTCCGAGTCCAGGAGACTGCGCCGGAAGGCCCTACCTTGACGTCTCCGCGGGGAGCTGTC
GATGCTGTGGGGAGCAACATCGTCTCCAGGATCGGCCAGATCAACCTTCGGGGTGGGCCGGCGCAAACCGGCGGC
AGCTCCTCATCAAGGGCTGGAGCCTAA
Gene >Ophio5|4175
ATGGGCGCAAGCGACTCCAAGATCGTCTTCAAGCAGGGCATCTTCAGACTGTCCGAGGAGCGCCACATTCCCGCC
GACGACACCTACTGGACCTCAGTTCGTGACGCTTCCCGCCCGTCGTCGCCCACCGCTTGCTGACGTGGACTACAG
TTCTGGGAGCTTCCCGAGTCGGCGGAAGATGTCTTCAGCCTCTTTTCTCCCGCCGACATCCGACGCACCCGCGAT
CGAGCGCTGGAAAATATCGAAACCCTTGTGCTTGCGCTGACGTCGCGCTTGTTCATTCTCCGCCATCACCCCTCC
TTTCCGGACCCCGAACTGGCGCCCGAGCGGGACGCGCTGAATTGCGTCAGGATTTTAACACGCATTATGCCATAC
ATTTATGAAAAGGAGAGCCTCAAGACTTGGGAGGAGCGCTTCTTTTGGGGAGCCCGGCGCAAGAAGAGCCGCCGC
GCAGCCATTGCCAATGAGGTCCTGTTCGACGAGGCTCAGGACGGCAAGCAGGATGCGCCGGCCGAGAACGACGAA
TTCGTGGACGTCAAGCCTTTGGCCGAGGAGCTTGTCGACACACTGATAGATCTCCTTTTCTTTTCTGACCTGACC
ATTCCGCGCCAGCCTCATGGCCAATCCAAGGTCACCTACGCCATTTGGCAAAGCGGCGTCGGCTGCAACACGGCC
GTTTCCACGACCAAAGAGTTTGAAAATAACAGGTGTGAAATATTGCGGCTGCTCTTGGCCCTAGCTGGCCAGAGC
ATGTACTTCAATCCAGGAACTCTCCCGCAGAGGGGGGTGCGGACATTAACCTATCTCTGTACTTGCCACGACAAG
CAGGCCGTACTATCGGTCTTGTGTTCGCTGTTGAATACGGTGCGTTTGAAAGATAGAGCCCTGTGGGCATCATGT
CCAGGCTAATCTCCGTGGAGGCAGACACTCAAGTACAACCCAGCAAGTTGGCGAGTCCCGTACAACACGCTGGTA
TTCAGGGACCCGAAGCAGATACTGGTCACATATTCCTTGCAGCTGATGCTTGTGTTGCTCGTATATCCGATTCCA
GAACATGCTCCCGCGCAGAAGAACTTCTATCGACACTTCTTGGGTCGACTTCATCGCCCTCAGGATTTCCAGTTC
ATTGTGGACGGCATCAGCCGAATCCTTAGCCAGCCGTTGCAGGACAAGACTTCCTACCTGCCAGGACCCCAGACG
TCGGGGAACTTGACTCCGGAAATGCTGATGCTCTTTTGGGAGTTGACCCAGTGCAACAAGCGATTTCGATCCTTC
ATCATCGACACCGATCGAGCCCACGACTTTGTCGTCTTGACGCTGTTCCACGCCCTGGAATACAAGAGCGATCCT
GCGAAACAGGGAGTGGTACGCATGTGTGCTTTTCTGTTGCAAACCCTGAGCGTTGAGACCAACTTCGGCCACAAT
CTCAACAAGCGATTCGAAGGCCAGGAGAGTCTTCCCGCATGCATCAGGATCAACGGATTCAACGGGTCCTACACC
GACTTTCTCATTCACTCCATCTATTGCCTGATCACGTCGAGCCAAGGTAGTTTCGCCGCAGTGTATCCTGCGCTT
TTGGCCGTCATCAACAACATTGCACCGCATGTCGAAGGACTGAGCGCCGCGGGCAGCTCTCAGCTTATGCATTTG
TTCTCCTCCATGTCTTCGCCTGCGTTTCTCCTTGCCAATGAAACCAACCACACTCTCCTCGACTCGCTCCTGGAG
TCCATCAACAGCATCATCGAAAACAAGTATCGCCAGAACCCAGAACTGATGCTGGCAATCGTCAAGAGTCGAAAG
CGGATTGAGGCTCTACGGTCCTTTACACTGGAGAGCGGCCAGGAGGAGCTAGAGCGAAGGAGTAGGAGACGAAAA
GACGTCGCCGGCAATGGAGACAACGCCGACTCCGGGTCAGTGAGAAGCTCGCTCGACAGCGCGCGCAGTCCACCG
CCCGTGCCATCCCGGATGCCGACGCTGGGACAGGTGCCTGAAGACAGCGCGTTCGCCATCGGTGACAATGAGGAG
GACGACAGCGACGACGAGCCGCAGGCAACCCCAGCACCTTCCACCACCAGCGAGAACCAGTCTCAGGCATCGTCA
GCCGTCAACATCGACGACGCTGTTCCGGTTCAGCTGCGCGGCATGTCCGAGAAGGCTCGCGGCAAAATGCCAGCG
GCGATCCGGTCGTTTTCGCGCCAGAATAGCACCACAAGTCTGGGATCGCAGCCTACCTCAGGACGGTCTCAAGGA
GGAGGGTTTGAGCCGACGGCGCAGTGGATTGACAGCTGGCTCCCGGAGCTGCCCCTGCATTCCATCCTGACTGTC
ATTCAGCAGGTAACGAGCCTGGTGCCCGGCAGGGAAGCTGTGTCGATGGATGCGATTCGCCGGGTTCAGGAAATG
GGCCTCGTTGGAGTCGAGCCGTCGCCCCCGCACGTGCATTCGTTTGAGTGGTCCCAGCCGGCGCTGGCCTGGTAC
GAGTCGCTCTTGTGGGGGATGATTTTCACGAGCGAGATGCAGATCGCCAAGGGCACCATGGGCATGTGGAACGGC
ACGTCGATTAAGCTCTTCCGAGTCCAGGAGACTGCGCCGGAAGGCCCTACCTTGACGTCTCCGCGGGGAGCTGTC
GATGCTGTGGGGAGCAACATCGTCTCCAGGATCGGCCAGATCAACCTTCGGGGTGGGCCGGCGCAAACCGGCGGC
AGCTCCTCATCAAGGGCTGGAGCCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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