© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|4154 |
| Gene name | |
| Location | scaffold_327:3407..5322 |
| Strand | - |
| Gene length (bp) | 1915 |
| Transcript length (bp) | 1518 |
| Coding sequence length (bp) | 1515 |
| Protein length (aa) | 505 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12697 | Abhydrolase_6 | Alpha/beta hydrolase family | 2.0E-12 | 222 | 446 |
| PF12146 | Hydrolase_4 | Serine aminopeptidase, S33 | 4.3E-10 | 217 | 348 |
| PF00561 | Abhydrolase_1 | alpha/beta hydrolase fold | 4.3E-09 | 219 | 326 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q7Z5M8|AB12B_HUMAN | Abhydrolase domain-containing protein 12B OS=Homo sapiens GN=ABHD12B PE=2 SV=1 | 219 | 411 | 1.0E-22 |
| sp|B4F753|ABD12_XENTR | Monoacylglycerol lipase ABHD12 OS=Xenopus tropicalis GN=abhd12 PE=2 SV=1 | 108 | 410 | 1.0E-19 |
| sp|Q6AYT7|ABD12_RAT | Monoacylglycerol lipase ABHD12 OS=Rattus norvegicus GN=Abhd12 PE=2 SV=1 | 109 | 410 | 2.0E-18 |
| sp|Q99LR1|ABD12_MOUSE | Monoacylglycerol lipase ABHD12 OS=Mus musculus GN=Abhd12 PE=1 SV=2 | 109 | 410 | 2.0E-18 |
| sp|Q08C93|ABD12_DANRE | Monoacylglycerol lipase ABHD12 OS=Danio rerio GN=abhd12 PE=2 SV=1 | 109 | 411 | 3.0E-18 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q7Z5M8|AB12B_HUMAN | Abhydrolase domain-containing protein 12B OS=Homo sapiens GN=ABHD12B PE=2 SV=1 | 219 | 411 | 1.0E-22 |
| sp|B4F753|ABD12_XENTR | Monoacylglycerol lipase ABHD12 OS=Xenopus tropicalis GN=abhd12 PE=2 SV=1 | 108 | 410 | 1.0E-19 |
| sp|Q6AYT7|ABD12_RAT | Monoacylglycerol lipase ABHD12 OS=Rattus norvegicus GN=Abhd12 PE=2 SV=1 | 109 | 410 | 2.0E-18 |
| sp|Q99LR1|ABD12_MOUSE | Monoacylglycerol lipase ABHD12 OS=Mus musculus GN=Abhd12 PE=1 SV=2 | 109 | 410 | 2.0E-18 |
| sp|Q08C93|ABD12_DANRE | Monoacylglycerol lipase ABHD12 OS=Danio rerio GN=abhd12 PE=2 SV=1 | 109 | 411 | 3.0E-18 |
| sp|Q4R766|ABD12_MACFA | Monoacylglycerol lipase ABHD12 OS=Macaca fascicularis GN=ABHD12 PE=2 SV=1 | 109 | 410 | 3.0E-17 |
| sp|Q8N2K0|ABD12_HUMAN | Monoacylglycerol lipase ABHD12 OS=Homo sapiens GN=ABHD12 PE=1 SV=2 | 109 | 410 | 3.0E-17 |
| sp|Q5ZIN0|ABD12_CHICK | Monoacylglycerol lipase ABHD12 OS=Gallus gallus GN=ABHD12 PE=2 SV=1 | 109 | 411 | 1.0E-16 |
| sp|Q08DW9|ABD12_BOVIN | Monoacylglycerol lipase ABHD12 OS=Bos taurus GN=ABHD12 PE=2 SV=1 | 115 | 410 | 1.0E-16 |
| sp|Q32LS6|ABHDD_DANRE | Alpha/beta hydrolase domain-containing protein 13 OS=Danio rerio GN=abhd13 PE=2 SV=1 | 204 | 303 | 8.0E-15 |
| sp|Q6IRP4|ABHDD_XENLA | Alpha/beta hydrolase domain-containing protein 13 OS=Xenopus laevis GN=abhd13 PE=2 SV=1 | 220 | 314 | 2.0E-12 |
| sp|Q80UX8|ABHDD_MOUSE | Alpha/beta hydrolase domain-containing protein 13 OS=Mus musculus GN=Abhd13 PE=2 SV=1 | 213 | 413 | 1.0E-10 |
| sp|Q8XA81|YHFR_ECO57 | Uncharacterized protein YfhR OS=Escherichia coli O157:H7 GN=yhfR PE=3 SV=4 | 120 | 409 | 2.0E-10 |
| sp|Q9KS12|MARTX_VIBCH | Multifunctional-autoprocessing repeats-in-toxin OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=rtxA PE=1 SV=2 | 197 | 350 | 3.0E-10 |
| sp|Q5ZJL8|ABHDD_CHICK | Alpha/beta hydrolase domain-containing protein 13 OS=Gallus gallus GN=ABHD13 PE=2 SV=1 | 220 | 314 | 5.0E-10 |
| sp|P54069|BEM46_SCHPO | Protein bem46 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bem46 PE=2 SV=3 | 206 | 398 | 2.0E-09 |
| sp|P77538|YFHR_ECOLI | Uncharacterized protein YfhR OS=Escherichia coli (strain K12) GN=yfhR PE=3 SV=4 | 120 | 409 | 2.0E-09 |
| sp|Q8Z4M8|YHFR_SALTI | Uncharacterized protein YfhR OS=Salmonella typhi GN=yhfR PE=3 SV=1 | 121 | 409 | 3.0E-09 |
| sp|Q7L211|ABHDD_HUMAN | Alpha/beta hydrolase domain-containing protein 13 OS=Homo sapiens GN=ABHD13 PE=2 SV=1 | 213 | 413 | 8.0E-09 |
| sp|Q8ZN39|YFHR_SALTY | Uncharacterized protein YfhR OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=yfhR PE=3 SV=1 | 121 | 409 | 3.0E-08 |
| sp|Q2HJ19|AB17A_BOVIN | Alpha/beta hydrolase domain-containing protein 17A OS=Bos taurus GN=ABHD17A PE=2 SV=1 | 188 | 323 | 1.0E-07 |
| sp|Q5UQK4|YL404_MIMIV | Putative alpha/beta hydrolase L404 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L404 PE=3 SV=1 | 218 | 414 | 1.0E-07 |
| sp|Q6AY17|AB17B_RAT | Alpha/beta hydrolase domain-containing protein 17B OS=Rattus norvegicus GN=Abhd17b PE=1 SV=1 | 210 | 323 | 2.0E-07 |
| sp|Q7M759|AB17B_MOUSE | Alpha/beta hydrolase domain-containing protein 17B OS=Mus musculus GN=Abhd17b PE=1 SV=1 | 210 | 323 | 2.0E-07 |
| sp|Q5ZJX1|AB17C_CHICK | Alpha/beta hydrolase domain-containing protein 17C OS=Gallus gallus GN=ABHD17C PE=2 SV=1 | 166 | 323 | 2.0E-07 |
| sp|Q5VST6|AB17B_HUMAN | Alpha/beta hydrolase domain-containing protein 17B OS=Homo sapiens GN=ABHD17B PE=1 SV=1 | 210 | 323 | 3.0E-07 |
| sp|Q7ZVZ7|AB17C_DANRE | Alpha/beta hydrolase domain-containing protein 17C OS=Danio rerio GN=abhd17c PE=2 SV=1 | 210 | 323 | 5.0E-07 |
| sp|Q8VCV1|AB17C_MOUSE | Alpha/beta hydrolase domain-containing protein 17C OS=Mus musculus GN=Abhd17c PE=1 SV=2 | 210 | 323 | 5.0E-07 |
| sp|A5PKD9|AB17C_BOVIN | Alpha/beta hydrolase domain-containing protein 17C OS=Bos taurus GN=ABHD17C PE=2 SV=1 | 210 | 323 | 6.0E-07 |
| sp|Q6PCB6|AB17C_HUMAN | Alpha/beta hydrolase domain-containing protein 17C OS=Homo sapiens GN=ABHD17C PE=2 SV=2 | 210 | 323 | 6.0E-07 |
| sp|Q5ZJ01|AB17B_CHICK | Alpha/beta hydrolase domain-containing protein 17B OS=Gallus gallus GN=ABHD17B PE=2 SV=1 | 210 | 323 | 8.0E-07 |
| sp|Q6DEY3|AB17B_XENTR | Alpha/beta hydrolase domain-containing protein 17B OS=Xenopus tropicalis GN=abhd17b PE=2 SV=1 | 210 | 323 | 8.0E-07 |
| sp|Q6DD70|AB17C_XENLA | Alpha/beta hydrolase domain-containing protein 17C OS=Xenopus laevis GN=abhd17c PE=2 SV=1 | 210 | 323 | 9.0E-07 |
| sp|Q99JW1|AB17A_MOUSE | Alpha/beta hydrolase domain-containing protein 17A OS=Mus musculus GN=Abhd17a PE=1 SV=1 | 211 | 323 | 1.0E-06 |
| sp|Q5XIJ5|AB17A_RAT | Alpha/beta hydrolase domain-containing protein 17A OS=Rattus norvegicus GN=Abhd17a PE=2 SV=1 | 211 | 323 | 1.0E-06 |
| sp|Q6GL10|AB17C_XENTR | Alpha/beta hydrolase domain-containing protein 17C OS=Xenopus tropicalis GN=abhd17c PE=2 SV=1 | 210 | 323 | 1.0E-06 |
| sp|P9WLC7|Y2307_MYCTU | Uncharacterized protein Rv2307c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv2307c PE=1 SV=1 | 250 | 310 | 3.0E-06 |
| sp|P9WLC6|Y2307_MYCTO | Uncharacterized protein MT2364 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT2364 PE=4 SV=1 | 250 | 310 | 3.0E-06 |
| sp|Q6DCC5|AB17B_XENLA | Alpha/beta hydrolase domain-containing protein 17B OS=Xenopus laevis GN=abhd17b PE=2 SV=1 | 210 | 323 | 8.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 42 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 107 | 129 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|4154 MGKRLVAGDYRVLFKGKAKRKSRKPHDSVDPKTSPSQSLSFWNAQDLPHRIEENALVILYAVSSSSGRRRDWLSS AGKLSLFRLACFPQLPAVRVMMGMHKLLRTAALLLVAPYAIYVVILFLLAVPVVQRHALYAHKINDLFWTDLNGP EAWGFASNQVTPFTIATPDGESVYAWHITPLPLYLKNEVRLTAQPSGLSPNFTNTESFRLLREDPNARLILYFHG TAGHIAQAVRPDSYHALTDTSSYHVVSIDYRGYGHSTGAPTEDGLIQDATALVDWALRVAGISPNRVVLLGHSLG TAVVSGVAEQYARKGIEFAGIVLVAGFSDLGSLIGGYRIGGLLPLLGPFAAWPALVRRLERFVVDRWHSSNRLAS IVRHTKTRLRLNLIHARNDRDIPCSEGDKLFRAAANETVGIIDEAEFAAWKEQRTIRKRKDAFVTTWTSDPDIIV RQELFPYGAHDPIMSYAPVAMAIMRSFDYQGTAYMQTTDGQRRPWLRSHSSLEGP |
| Coding | >Ophio5|4154 ATGGGAAAGAGACTCGTGGCTGGTGACTATAGAGTGCTATTCAAAGGAAAAGCAAAGAGGAAAAGCAGGAAACCA CATGACTCCGTCGACCCAAAAACCTCCCCGTCGCAAAGTCTCTCCTTCTGGAACGCGCAAGACCTCCCTCATCGG ATCGAGGAAAATGCGCTGGTTATACTTTACGCCGTCTCTTCCTCATCCGGACGTCGTCGCGACTGGCTCTCGTCG GCCGGCAAGCTGTCGTTGTTCCGCCTCGCTTGCTTTCCTCAACTGCCAGCGGTCCGAGTCATGATGGGGATGCAC AAGTTGTTGCGCACCGCCGCGCTGCTCCTCGTCGCGCCCTACGCCATCTACGTCGTTATCCTTTTCCTCCTTGCG GTCCCCGTCGTCCAGAGACACGCTTTGTACGCCCACAAGATCAATGACCTCTTCTGGACCGATCTCAACGGGCCT GAGGCCTGGGGCTTCGCCAGCAACCAGGTTACGCCCTTTACCATCGCCACACCCGATGGCGAGAGCGTCTACGCT TGGCACATTACGCCCCTGCCGCTGTACCTAAAGAACGAGGTCAGACTTACTGCCCAGCCGTCGGGCCTGTCGCCA AATTTTACCAACACGGAGTCGTTCCGCCTCCTCCGGGAAGATCCTAATGCCAGGCTGATTCTATACTTTCACGGG ACCGCAGGCCACATCGCGCAGGCCGTTCGCCCCGACTCATACCACGCCTTGACGGACACGTCGTCGTACCACGTC GTCTCCATCGACTATCGCGGCTACGGTCACTCCACCGGCGCACCGACCGAGGACGGTCTGATACAGGACGCGACG GCGCTCGTCGACTGGGCGCTCCGGGTGGCCGGCATCTCCCCGAACCGCGTGGTGCTACTGGGGCACAGCCTCGGC ACGGCCGTCGTTAGCGGCGTCGCTGAGCAATATGCACGGAAAGGGATCGAGTTCGCCGGCATCGTCCTCGTCGCC GGTTTCAGCGACCTCGGATCGCTCATCGGCGGATACCGCATCGGCGGGCTACTGCCTCTGCTGGGCCCCTTCGCC GCCTGGCCTGCGCTGGTTCGCAGGCTGGAGCGCTTCGTCGTTGACCGGTGGCACTCGTCGAATCGGCTGGCCAGC ATCGTGCGCCATACCAAGACTCGGCTGCGTCTCAACCTGATCCACGCCCGCAACGACCGCGACATTCCCTGTAGT GAAGGCGACAAGCTGTTCCGCGCGGCCGCCAACGAGACGGTCGGCATCATCGACGAAGCCGAGTTCGCGGCGTGG AAGGAACAGCGCACGATACGTAAGCGCAAAGACGCCTTTGTGACGACATGGACGTCGGATCCGGACATTATCGTT CGTCAGGAGCTGTTCCCGTATGGAGCGCACGATCCGATCATGAGCTACGCCCCGGTGGCGATGGCCATTATGAGG TCATTTGATTATCAGGGAACGGCATATATGCAGACGACCGACGGCCAGAGACGGCCATGGCTGCGTAGCCACTCA AGCTTGGAGGGTCCC |
| Transcript | >Ophio5|4154 ATGGGAAAGAGACTCGTGGCTGGTGACTATAGAGTGCTATTCAAAGGAAAAGCAAAGAGGAAAAGCAGGAAACCA CATGACTCCGTCGACCCAAAAACCTCCCCGTCGCAAAGTCTCTCCTTCTGGAACGCGCAAGACCTCCCTCATCGG ATCGAGGAAAATGCGCTGGTTATACTTTACGCCGTCTCTTCCTCATCCGGACGTCGTCGCGACTGGCTCTCGTCG GCCGGCAAGCTGTCGTTGTTCCGCCTCGCTTGCTTTCCTCAACTGCCAGCGGTCCGAGTCATGATGGGGATGCAC AAGTTGTTGCGCACCGCCGCGCTGCTCCTCGTCGCGCCCTACGCCATCTACGTCGTTATCCTTTTCCTCCTTGCG GTCCCCGTCGTCCAGAGACACGCTTTGTACGCCCACAAGATCAATGACCTCTTCTGGACCGATCTCAACGGGCCT GAGGCCTGGGGCTTCGCCAGCAACCAGGTTACGCCCTTTACCATCGCCACACCCGATGGCGAGAGCGTCTACGCT TGGCACATTACGCCCCTGCCGCTGTACCTAAAGAACGAGGTCAGACTTACTGCCCAGCCGTCGGGCCTGTCGCCA AATTTTACCAACACGGAGTCGTTCCGCCTCCTCCGGGAAGATCCTAATGCCAGGCTGATTCTATACTTTCACGGG ACCGCAGGCCACATCGCGCAGGCCGTTCGCCCCGACTCATACCACGCCTTGACGGACACGTCGTCGTACCACGTC GTCTCCATCGACTATCGCGGCTACGGTCACTCCACCGGCGCACCGACCGAGGACGGTCTGATACAGGACGCGACG GCGCTCGTCGACTGGGCGCTCCGGGTGGCCGGCATCTCCCCGAACCGCGTGGTGCTACTGGGGCACAGCCTCGGC ACGGCCGTCGTTAGCGGCGTCGCTGAGCAATATGCACGGAAAGGGATCGAGTTCGCCGGCATCGTCCTCGTCGCC GGTTTCAGCGACCTCGGATCGCTCATCGGCGGATACCGCATCGGCGGGCTACTGCCTCTGCTGGGCCCCTTCGCC GCCTGGCCTGCGCTGGTTCGCAGGCTGGAGCGCTTCGTCGTTGACCGGTGGCACTCGTCGAATCGGCTGGCCAGC ATCGTGCGCCATACCAAGACTCGGCTGCGTCTCAACCTGATCCACGCCCGCAACGACCGCGACATTCCCTGTAGT GAAGGCGACAAGCTGTTCCGCGCGGCCGCCAACGAGACGGTCGGCATCATCGACGAAGCCGAGTTCGCGGCGTGG AAGGAACAGCGCACGATACGTAAGCGCAAAGACGCCTTTGTGACGACATGGACGTCGGATCCGGACATTATCGTT CGTCAGGAGCTGTTCCCGTATGGAGCGCACGATCCGATCATGAGCTACGCCCCGGTGGCGATGGCCATTATGAGG TCATTTGATTATCAGGGAACGGCATATATGCAGACGACCGACGGCCAGAGACGGCCATGGCTGCGTAGCCACTCA AGCTTGGAGGGTCCCTGA |
| Gene | >Ophio5|4154 ATGGGAAAGAGACTCGTGGCTGGTGACTATAGAGTGCTATTCAAAGGCATGAATGAACGTCCTGATTCCCGACGC CAAGGCCAGTGTCTGACGATGACGACAGGAAAAGCAAAGAGGAAAAGCAGGGTAAATCAATCGCATGAATTACGA AAGAAAAAAAAAAAGGAAAAATTAAATAAATAGAAACCACATGACTCCGTCGACCCAAAAACCTCCCCGTCGCAA AGTCTCTCCTTCTGGAACGCGCAAGACCTCCCTCATCGGATCGAGGAAAATGCGCTGGTTATACTTTACGCCGTC TCTTCCTCATCCGGACGTCGTCGCGACTGGCTCTCGTCGGCCGGCAAGCTGTCGTTGTTCCGCCTCGCTTGCTTT CCTCAACTGCCAGCGGTCCGAGTCATGATGGGGATGCACAAGTTGTTGCGCACCGCCGCGCTGCTCCTCGTCGCG CCCTACGCCATCTACGTCGTTATCCTTTTCCTCCTTGCGGTCCCCGTCGTCCAGAGACAGTCAGTGGCCTGTTCC GCCGTATCCGCCGCTACTTGGTACCCAGCTGACGCCGAGATACTGCAGCGCTTTGTACGCCCACAAGATCAATGA CCTCTTCTGGACCGATCTCAACGGGCCTGAGGCCTGGGGCTTCGCCAGTATGTCGCCGGGAAAGCTAGGTGGACC TTGTCCTGACAGTGATGCTCGCAGGCAACCAGGTTACGCCCTTTACCATCGCCACACCCGATGGCGAGAGCGTCT ACGCTTGGCACATTACGCCCCTGCCGCTGTACCTAAAGAACGAGGTCAGACTTACTGCCCAGCCGTCGGGCCTGT CGCCAAATTTTACCAACACGGAGTCGTTCCGCCTCCTCCGGGAAGATCCTAATGCCAGGCTGATTCTATACTGTG AGCCGGATCGCTGTCTGTCGGATCGTTGGGATGTCGAAGCTAACGCCTCATATCAGTTCACGGGGTACGTCGGAC GAGCGCCGAAACAAGTAGGTGGAAGCTCACATCGAATACAGACCGCAGGCCACATCGCGCAGGCCGTTCGCCCCG ACTCATACCACGCCTTGACGGACACGTCGTCGTACCACGTCGTCTCCATCGACTATCGCGGCTACGGTCACTCCA CCGGCGCACCGACCGAGGACGGTCTGATACAGGACGCGACGGCGCTCGTCGACTGGGCGCTCCGGGTGGCCGGCA TCTCCCCGAACCGCGTGGTGCTACTGGGGCACAGCCTCGGCACGGCCGTCGTTAGCGGCGTCGCTGAGCAATATG CACGGAAAGGGATCGAGTTCGCCGGCATCGTCCTCGTCGCCGGTTTCAGCGACCTCGGATCGCTCATCGGCGGAT ACCGCATCGGCGGGCTACTGCCTCTGCTGGGCCCCTTCGCCGCCTGGCCTGCGCTGGTTCGCAGGCTGGAGCGCT TCGTCGTTGACCGGTGGCACTCGTCGAATCGGCTGGCCAGCATCGTGCGCCATACCAAGACTCGGCTGCGTCTCA ACCTGATCCACGCCCGCAACGACCGCGACATTCCCTGTAGTGAAGGCGACAAGCTGTTCCGCGCGGCCGCCAACG AGACGGTCGGCATCATCGACGAAGCCGAGTTCGCGGCGTGGAAGGAACAGCGCACGATACGTAAGCGCAAAGACG CCTTTGTGACGACATGGACGTCGGATCCGGACATTATCGTTCGTCAGGAGCTGTTCCCGTATGGAGGTGAGTGAG GCCTAGCTTGGAGGCGGCGCGGATACGTGCTGACTGGCGATGGGCAGCGCACGATCCGATCATGAGCTACGCCCC GGTGGCGATGGCCATTATGAGGTCATTTGATTATCAGGGAACGGCATATATGCAGACGACCGACGGCCAGAGACG GCCATGGCTGCGTAGCCACTCAAGCTTGGAGGGTCCCTGA |