Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|413
Gene name
Locationscaffold_11:24308..25649
Strand-
Gene length (bp)1341
Transcript length (bp)1341
Coding sequence length (bp)1338
Protein length (aa) 446

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|413
MLLTRHVLLPSQGSARMLSLVGVTIILIVGLPTGALQLHGPLDLASLHLDKPEAQFIISRVKRAVTVRTIPFVDV
HLHENRTQLGADAHERYMHSRVGLLCGQGLYYRHTLLPGYEVDVHPFAHQDYESFNTNWHQESSITLTQTTATTE
DTSVEWRVDSSVTESRQDTTTETSEESLGGSSEKATSSSLQNTTNHLQGLKSGIDFYGFELETTAQETYSYMNTG
VYSAKDLHSNNEKSTESFTLSDALRSTTTSGQNSNRGNSKTFTQDVSLSMTCSARHLCEVQTWTFTAKVRGHCVL
VPFFDFSRCPVQDGLAKARHYNPGHSRVRYEMFPPLNITLGAVNMSFPNHWFESVRDMFMTVPRVSDKHRSHKMG
DGIVYPASNVKFNYTRIAPCEVSFPLLQSDGTPYSVQILFQEEIPSARRRRFAVQGNGKGMKMSILDSNIP
Coding >Ophio5|413
ATGCTGCTCACTCGTCATGTCCTGCTGCCATCGCAGGGTTCGGCTAGGATGCTTTCCCTTGTCGGTGTTACTATC
ATCTTGATTGTTGGGCTGCCGACCGGCGCCTTGCAGCTGCATGGGCCTCTGGACCTGGCCAGTCTGCACTTGGAC
AAGCCGGAAGCGCAGTTCATCATCAGTCGCGTCAAGCGAGCCGTAACGGTCCGTACCATTCCCTTTGTCGACGTT
CATTTGCATGAGAACAGGACGCAACTCGGAGCCGACGCGCATGAACGCTACATGCATTCGCGTGTAGGCCTTCTC
TGTGGACAAGGCCTGTATTATCGCCACACTCTCCTTCCTGGCTATGAAGTCGATGTCCACCCTTTCGCTCATCAA
GACTATGAGAGCTTCAATACGAATTGGCATCAAGAGTCGTCCATCACCTTGACACAGACAACGGCGACGACAGAG
GATACTTCGGTCGAGTGGAGAGTGGACTCTTCCGTGACCGAGTCCCGTCAAGACACGACGACGGAGACTTCAGAA
GAGTCTTTGGGCGGATCAAGCGAGAAAGCGACGTCGTCGTCGTTGCAAAACACGACAAATCACTTACAAGGCCTC
AAAAGTGGGATAGATTTCTATGGCTTTGAACTGGAGACGACGGCACAGGAGACCTATTCATACATGAACACGGGC
GTCTACTCGGCAAAGGATTTGCACAGCAACAACGAGAAGAGCACGGAGAGCTTCACCCTCAGTGATGCGCTGCGG
AGCACCACGACGTCCGGACAGAACAGCAACCGAGGCAACTCCAAGACCTTTACCCAGGACGTGTCACTCTCCATG
ACCTGCTCAGCCCGTCACTTGTGCGAGGTACAGACCTGGACCTTTACGGCTAAAGTAAGAGGGCACTGCGTGCTC
GTTCCCTTTTTCGACTTTAGTCGTTGCCCGGTTCAGGATGGCTTGGCCAAGGCCCGGCATTATAACCCCGGGCAC
TCAAGAGTCCGTTACGAGATGTTTCCGCCCCTCAACATTACCCTTGGCGCTGTGAACATGTCGTTTCCGAATCAT
TGGTTCGAGTCAGTTCGAGACATGTTCATGACTGTGCCGCGCGTGTCAGATAAGCACAGGTCGCACAAGATGGGC
GACGGTATCGTTTATCCCGCTTCCAACGTCAAGTTCAACTACACCAGGATAGCTCCCTGCGAGGTTTCCTTCCCA
CTACTGCAAAGTGACGGCACACCGTACAGCGTGCAAATCTTGTTTCAGGAGGAGATACCCTCGGCGCGGAGAAGA
AGATTCGCCGTCCAAGGTAACGGCAAAGGGATGAAGATGAGTATTCTCGACTCAAATATTCCC
Transcript >Ophio5|413
ATGCTGCTCACTCGTCATGTCCTGCTGCCATCGCAGGGTTCGGCTAGGATGCTTTCCCTTGTCGGTGTTACTATC
ATCTTGATTGTTGGGCTGCCGACCGGCGCCTTGCAGCTGCATGGGCCTCTGGACCTGGCCAGTCTGCACTTGGAC
AAGCCGGAAGCGCAGTTCATCATCAGTCGCGTCAAGCGAGCCGTAACGGTCCGTACCATTCCCTTTGTCGACGTT
CATTTGCATGAGAACAGGACGCAACTCGGAGCCGACGCGCATGAACGCTACATGCATTCGCGTGTAGGCCTTCTC
TGTGGACAAGGCCTGTATTATCGCCACACTCTCCTTCCTGGCTATGAAGTCGATGTCCACCCTTTCGCTCATCAA
GACTATGAGAGCTTCAATACGAATTGGCATCAAGAGTCGTCCATCACCTTGACACAGACAACGGCGACGACAGAG
GATACTTCGGTCGAGTGGAGAGTGGACTCTTCCGTGACCGAGTCCCGTCAAGACACGACGACGGAGACTTCAGAA
GAGTCTTTGGGCGGATCAAGCGAGAAAGCGACGTCGTCGTCGTTGCAAAACACGACAAATCACTTACAAGGCCTC
AAAAGTGGGATAGATTTCTATGGCTTTGAACTGGAGACGACGGCACAGGAGACCTATTCATACATGAACACGGGC
GTCTACTCGGCAAAGGATTTGCACAGCAACAACGAGAAGAGCACGGAGAGCTTCACCCTCAGTGATGCGCTGCGG
AGCACCACGACGTCCGGACAGAACAGCAACCGAGGCAACTCCAAGACCTTTACCCAGGACGTGTCACTCTCCATG
ACCTGCTCAGCCCGTCACTTGTGCGAGGTACAGACCTGGACCTTTACGGCTAAAGTAAGAGGGCACTGCGTGCTC
GTTCCCTTTTTCGACTTTAGTCGTTGCCCGGTTCAGGATGGCTTGGCCAAGGCCCGGCATTATAACCCCGGGCAC
TCAAGAGTCCGTTACGAGATGTTTCCGCCCCTCAACATTACCCTTGGCGCTGTGAACATGTCGTTTCCGAATCAT
TGGTTCGAGTCAGTTCGAGACATGTTCATGACTGTGCCGCGCGTGTCAGATAAGCACAGGTCGCACAAGATGGGC
GACGGTATCGTTTATCCCGCTTCCAACGTCAAGTTCAACTACACCAGGATAGCTCCCTGCGAGGTTTCCTTCCCA
CTACTGCAAAGTGACGGCACACCGTACAGCGTGCAAATCTTGTTTCAGGAGGAGATACCCTCGGCGCGGAGAAGA
AGATTCGCCGTCCAAGGTAACGGCAAAGGGATGAAGATGAGTATTCTCGACTCAAATATTCCCTAA
Gene >Ophio5|413
ATGCTGCTCACTCGTCATGTCCTGCTGCCATCGCAGGGTTCGGCTAGGATGCTTTCCCTTGTCGGTGTTACTATC
ATCTTGATTGTTGGGCTGCCGACCGGCGCCTTGCAGCTGCATGGGCCTCTGGACCTGGCCAGTCTGCACTTGGAC
AAGCCGGAAGCGCAGTTCATCATCAGTCGCGTCAAGCGAGCCGTAACGGTCCGTACCATTCCCTTTGTCGACGTT
CATTTGCATGAGAACAGGACGCAACTCGGAGCCGACGCGCATGAACGCTACATGCATTCGCGTGTAGGCCTTCTC
TGTGGACAAGGCCTGTATTATCGCCACACTCTCCTTCCTGGCTATGAAGTCGATGTCCACCCTTTCGCTCATCAA
GACTATGAGAGCTTCAATACGAATTGGCATCAAGAGTCGTCCATCACCTTGACACAGACAACGGCGACGACAGAG
GATACTTCGGTCGAGTGGAGAGTGGACTCTTCCGTGACCGAGTCCCGTCAAGACACGACGACGGAGACTTCAGAA
GAGTCTTTGGGCGGATCAAGCGAGAAAGCGACGTCGTCGTCGTTGCAAAACACGACAAATCACTTACAAGGCCTC
AAAAGTGGGATAGATTTCTATGGCTTTGAACTGGAGACGACGGCACAGGAGACCTATTCATACATGAACACGGGC
GTCTACTCGGCAAAGGATTTGCACAGCAACAACGAGAAGAGCACGGAGAGCTTCACCCTCAGTGATGCGCTGCGG
AGCACCACGACGTCCGGACAGAACAGCAACCGAGGCAACTCCAAGACCTTTACCCAGGACGTGTCACTCTCCATG
ACCTGCTCAGCCCGTCACTTGTGCGAGGTACAGACCTGGACCTTTACGGCTAAAGTAAGAGGGCACTGCGTGCTC
GTTCCCTTTTTCGACTTTAGTCGTTGCCCGGTTCAGGATGGCTTGGCCAAGGCCCGGCATTATAACCCCGGGCAC
TCAAGAGTCCGTTACGAGATGTTTCCGCCCCTCAACATTACCCTTGGCGCTGTGAACATGTCGTTTCCGAATCAT
TGGTTCGAGTCAGTTCGAGACATGTTCATGACTGTGCCGCGCGTGTCAGATAAGCACAGGTCGCACAAGATGGGC
GACGGTATCGTTTATCCCGCTTCCAACGTCAAGTTCAACTACACCAGGATAGCTCCCTGCGAGGTTTCCTTCCCA
CTACTGCAAAGTGACGGCACACCGTACAGCGTGCAAATCTTGTTTCAGGAGGAGATACCCTCGGCGCGGAGAAGA
AGATTCGCCGTCCAAGGTAACGGCAAAGGGATGAAGATGAGTATTCTCGACTCAAATATTCCCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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