Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|4122
Gene name
Location	scaffold_323:1306..3138
Strand	-
Gene length (bp)	1832
Transcript length (bp)	1515
Coding sequence length (bp)	1512
Protein length (aa)	504

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01565	FAD_binding_4	FAD binding domain	1.2E-17	59	194

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|D7UQ40\|SOL5_ALTSO	Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1	58	495	6.0E-35
sp\|D4B1P2\|A2372_ARTBC	Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1	38	495	1.0E-27
sp\|P08159\|HDNO_ARTOX	6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2	47	226	3.0E-14
sp\|Q54H55\|Y8969_DICDI	FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1	25	307	6.0E-10
sp\|Q9FUJ3\|CKX2_ARATH	Cytokinin dehydrogenase 2 OS=Arabidopsis thaliana GN=CKX2 PE=1 SV=2	1	218	1.0E-08

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|D7UQ40\|SOL5_ALTSO	Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1	58	495	6.0E-35
sp\|D4B1P2\|A2372_ARTBC	Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1	38	495	1.0E-27
sp\|P08159\|HDNO_ARTOX	6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2	47	226	3.0E-14
sp\|Q54H55\|Y8969_DICDI	FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1	25	307	6.0E-10
sp\|Q9FUJ3\|CKX2_ARATH	Cytokinin dehydrogenase 2 OS=Arabidopsis thaliana GN=CKX2 PE=1 SV=2	1	218	1.0E-08
sp\|P43485\|MCRA_STRLA	Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2	59	224	3.0E-08
sp\|Q9FZC7\|FOX4_ARATH	Flavin-dependent oxidoreductase FOX4 OS=Arabidopsis thaliana GN=FOX4 PE=2 SV=1	44	221	1.0E-07
sp\|D4AS41\|A7056_ARTBC	Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2	66	207	1.0E-07
sp\|D4B1Z7\|A2478_ARTBC	Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1	59	219	3.0E-06
sp\|Q9LTS3\|CKX3_ARATH	Cytokinin dehydrogenase 3 OS=Arabidopsis thaliana GN=CKX3 PE=1 SV=1	57	218	4.0E-06

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GO

GO Term	Description	Terminal node
GO:0016491	oxidoreductase activity	Yes
GO:0050660	flavin adenine dinucleotide binding	Yes
GO:0036094	small molecule binding	No
GO:0097159	organic cyclic compound binding	No
GO:0005488	binding	No
GO:1901265	nucleoside phosphate binding	No
GO:0000166	nucleotide binding	No
GO:0003824	catalytic activity	No
GO:0003674	molecular_function	No
GO:0043167	ion binding	No
GO:0043168	anion binding	No
GO:1901363	heterocyclic compound binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 17	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|4122 MKSFVIVAALAGFVNAILSGPECCNRLSSAVPFIYHPPSTANYNYLINNRWSGNSILHPSCVVAPKSSLDVSKAL QVLSKHQCKFAVKGGGHNANRGANSIDDAVSIDLSFLDTAELAPDRSHVSLGAGGSWGRAYDKFNSSDIGFLGGL CANVSVGAVALGGGESLFQASMGWAVDHILNYEIVLGTGRIINANRRENGDLFKALKGGNTNFGIVTKIDLASFD FKDFWDAEVVMSLNGPQATRSQMLDIISKTTVDFVANNAKDVANGLHVAVTSVAANNSELAIMGITNVKNVANPP AAKPIRSIPNQRANVERHGRIADYVHSISGFQPRGFRQVTASVTIKNDYKTLREIWDASNAVYRSLPQNDKIDWI VELYPQPRVQQSYSLKYGGNSLGLANVKHDQIVIWLVSRWRDPSVDGIMEVAQKQFVAAVEAVANKHGTLSPFVY VNFAGSFQNPLCGYGAESVAHLKKMARKYDPQGVFQHLMSGGFKVSQANCGRRQ
Coding	>Ophio5\|4122 ATGAAGAGCTTCGTCATAGTCGCGGCTCTTGCCGGGTTCGTCAATGCGATTCTGTCAGGGCCTGAATGCTGCAAC CGCCTCTCCAGTGCCGTCCCCTTCATCTACCACCCCCCCTCGACGGCCAACTACAACTACCTGATCAACAACCGC TGGTCCGGCAACTCGATCCTCCACCCGTCGTGCGTCGTGGCCCCCAAATCATCACTCGACGTGTCCAAAGCGCTG CAAGTGCTCAGCAAGCACCAATGCAAGTTCGCCGTCAAGGGCGGCGGCCACAACGCCAACCGCGGCGCCAACAGT ATCGACGACGCCGTCTCCATCGATCTCAGCTTTCTCGACACGGCAGAGCTGGCCCCCGATCGATCACATGTCAGT CTCGGTGCTGGTGGCTCTTGGGGTCGCGCATACGACAAGTTTAATAGTAGCGATATCGGCTTCCTCGGTGGTCTT TGCGCCAATGTTAGCGTCGGCGCCGTCGCTCTCGGTGGCGGAGAGTCGCTCTTCCAGGCTAGTATGGGCTGGGCT GTTGATCATATCCTAAACTATGAGATTGTCCTGGGCACTGGTCGCATCATCAACGCGAACCGGAGAGAAAACGGC GATCTTTTCAAGGCCCTCAAGGGCGGCAACACCAACTTCGGCATCGTCACCAAAATCGACCTCGCATCTTTCGAT TTCAAAGATTTTTGGGACGCAGAGGTCGTCATGTCTCTCAATGGCCCTCAGGCAACCCGCTCGCAGATGCTCGAC ATCATCAGCAAAACGACGGTCGACTTCGTGGCCAACAATGCCAAAGACGTGGCCAACGGCCTACACGTCGCCGTC ACCTCTGTGGCTGCCAACAACTCCGAGCTGGCCATCATGGGCATCACGAACGTGAAGAACGTTGCGAATCCCCCT GCCGCCAAGCCCATTCGCAGTATTCCGAACCAGCGGGCCAACGTGGAGCGTCATGGTAGGATTGCCGACTATGTC CACTCCATTAGCGGCTTTCAGCCCAGGGGCTTCCGCCAAGTCACGGCCAGCGTGACGATTAAAAACGACTACAAG ACGCTGCGGGAAATCTGGGATGCCTCAAACGCCGTCTACAGGTCACTGCCGCAAAATGACAAAATAGACTGGATA GTCGAGCTCTACCCTCAGCCCAGAGTCCAACAATCCTATTCCTTGAAATACGGAGGCAACAGTCTCGGACTAGCC AACGTCAAGCACGACCAGATCGTCATCTGGCTCGTCTCACGCTGGAGAGACCCGAGCGTCGATGGCATCATGGAA GTCGCCCAAAAACAGTTCGTCGCCGCCGTCGAGGCCGTTGCGAACAAGCACGGCACCCTCTCCCCTTTCGTCTAC GTCAATTTCGCCGGCTCGTTCCAGAATCCTCTCTGCGGCTACGGCGCCGAGAGCGTGGCTCATCTCAAGAAGATG GCTAGGAAGTATGACCCTCAGGGTGTCTTCCAGCATCTGATGAGTGGCGGCTTCAAGGTTAGCCAGGCGAACTGT GGCCGGCGACAG
Transcript	>Ophio5\|4122 ATGAAGAGCTTCGTCATAGTCGCGGCTCTTGCCGGGTTCGTCAATGCGATTCTGTCAGGGCCTGAATGCTGCAAC CGCCTCTCCAGTGCCGTCCCCTTCATCTACCACCCCCCCTCGACGGCCAACTACAACTACCTGATCAACAACCGC TGGTCCGGCAACTCGATCCTCCACCCGTCGTGCGTCGTGGCCCCCAAATCATCACTCGACGTGTCCAAAGCGCTG CAAGTGCTCAGCAAGCACCAATGCAAGTTCGCCGTCAAGGGCGGCGGCCACAACGCCAACCGCGGCGCCAACAGT ATCGACGACGCCGTCTCCATCGATCTCAGCTTTCTCGACACGGCAGAGCTGGCCCCCGATCGATCACATGTCAGT CTCGGTGCTGGTGGCTCTTGGGGTCGCGCATACGACAAGTTTAATAGTAGCGATATCGGCTTCCTCGGTGGTCTT TGCGCCAATGTTAGCGTCGGCGCCGTCGCTCTCGGTGGCGGAGAGTCGCTCTTCCAGGCTAGTATGGGCTGGGCT GTTGATCATATCCTAAACTATGAGATTGTCCTGGGCACTGGTCGCATCATCAACGCGAACCGGAGAGAAAACGGC GATCTTTTCAAGGCCCTCAAGGGCGGCAACACCAACTTCGGCATCGTCACCAAAATCGACCTCGCATCTTTCGAT TTCAAAGATTTTTGGGACGCAGAGGTCGTCATGTCTCTCAATGGCCCTCAGGCAACCCGCTCGCAGATGCTCGAC ATCATCAGCAAAACGACGGTCGACTTCGTGGCCAACAATGCCAAAGACGTGGCCAACGGCCTACACGTCGCCGTC ACCTCTGTGGCTGCCAACAACTCCGAGCTGGCCATCATGGGCATCACGAACGTGAAGAACGTTGCGAATCCCCCT GCCGCCAAGCCCATTCGCAGTATTCCGAACCAGCGGGCCAACGTGGAGCGTCATGGTAGGATTGCCGACTATGTC CACTCCATTAGCGGCTTTCAGCCCAGGGGCTTCCGCCAAGTCACGGCCAGCGTGACGATTAAAAACGACTACAAG ACGCTGCGGGAAATCTGGGATGCCTCAAACGCCGTCTACAGGTCACTGCCGCAAAATGACAAAATAGACTGGATA GTCGAGCTCTACCCTCAGCCCAGAGTCCAACAATCCTATTCCTTGAAATACGGAGGCAACAGTCTCGGACTAGCC AACGTCAAGCACGACCAGATCGTCATCTGGCTCGTCTCACGCTGGAGAGACCCGAGCGTCGATGGCATCATGGAA GTCGCCCAAAAACAGTTCGTCGCCGCCGTCGAGGCCGTTGCGAACAAGCACGGCACCCTCTCCCCTTTCGTCTAC GTCAATTTCGCCGGCTCGTTCCAGAATCCTCTCTGCGGCTACGGCGCCGAGAGCGTGGCTCATCTCAAGAAGATG GCTAGGAAGTATGACCCTCAGGGTGTCTTCCAGCATCTGATGAGTGGCGGCTTCAAGGTTAGCCAGGCGAACTGT GGCCGGCGACAGTGA
Gene	>Ophio5\|4122 ATGAAGAGCTTCGTCATAGTCGCGGCTCTTGCCGGGTTCGTCAATGCGATTCTGTCAGGGCCTGAATGCGTGAGT CCTTTCTCTCCTCAGTGCACGATAACCAGCAAAGACAAAAACAAGATGGAAGAAAAAAAAAAAGTCTGTATAAAA CATGATGAAAGCTGACAAGAGTTTTCGATGCCCTTCCAGTGCAACCGCCTCTCCAGTGCCGTCCCCTTCATCTAC CACCCCCCCTCGACGGCCAACTACAACTACCTGATCAACAACCGCTGGTCCGGCAACTCGATCCTCCACCCGTCG TGCGTCGTGGCCCCCAAATCATCACTCGACGTGTCCAAAGCGCTGCAAGTGCTCAGCAAGCACCAATGCAAGTTC GCCGTCAAGGGCGGCGGCCACAACGCCAACCGCGGCGCCAACAGTATCGACGACGCCGTCTCCATCGATCTCAGC TTTCTCGACACGGCAGAGCTGGCCCCCGATCGATCACATGTCAGTCTCGGTGCTGGTGGCTCTTGGGGTCGCGCA TACGACAAGTTTAATAGTAGCGATATCGGCTTCCTCGGTGGTCTTTGCGCCAATGTTAGCGTCGGCGCCGTCGCT CTCGGTGGCGGAGAGTCGCTCTTCCAGGCTAGTATGGGCTGGGCTGTTGATCATATCCTAAACTATGAGATTGTC CTGGGCACTGGTCGCATCATCAACGCGAACCGGAGAGAAAACGGCGATCTTTTCAAGGCCCTCAAGGGCGGCAAC ACCAACTTCGGCATCGTCACCAAAATCGACCTCGCATCTTTCGATTTCAAAGATTTTTGGGACGCAGAGGTCGTC ATGTCTCTCAATGGCCCTCAGGCAACCCGCTCGCAGATGCTCGACATCATCAGCAAAACGACGGTCGACTTCGTG GCCAACAATGCCAAAGACGTGGCCAACGGCCTACACGTCGCCGTCACCTCTGTGGCTGCCAACAACTCCGAGCTG GCCATCATGGGCATCACGAACGTGAAGAACGTTGCGAATCCCCCTGCCGCCAAGCCCATTCGCAGTATTCCGAAC CAGCGGGCCAACGTGGAGCGTCATGGTAGGATTGCCGACTATGTCCACTCCATTAGCGGCTTTCAGCCCAGGGGC TTCCGGTGAGTGCAAGCCTCTAGATGAAGTTTTTTCGTCTATCGATATGTTTCCTCTTTTTTTTTCCCCTTTCTT TTTCTTCTTTCTTTCTTTTTCGTTTCCTTCCTTTCGATTTCTGACTTATTCCATAGCCAAGTCACGGCCAGCGTG ACGATTAAAAACGACTACAAGACGCTGCGGGAAATCTGGGATGCCTCAAACGCCGTCTACAGGTCACTGCCGCAA AATGACAAAATAGACTGGATAGTCGAGCTCTACCCTCAGCCCAGAGTCCAACAATCCTATTCCTTGAAATACGGA GGCAACAGTCTCGGACTAGCCAACGTCAAGCACGACCAGATCGGTAAGAAAGACAAAGCCTCCCGCGAAAAAAAA ACCACCATCAAACGCGTCTATCTAACTGAAAAAAAAAAGTCATCTGGCTCGTCTCACGCTGGAGAGACCCGAGCG TCGATGGCATCATGGAAGTCGCCCAAAAACAGTTCGTCGCCGCCGTCGAGGCCGTTGCGAACAAGCACGGCACCC TCTCCCCTTTCGTCTACGTCAATTTCGCCGGCTCGTTCCAGAATCCTCTCTGCGGCTACGGCGCCGAGAGCGTGG CTCATCTCAAGAAGATGGCTAGGAAGTATGACCCTCAGGGTGTCTTCCAGCATCTGATGAGTGGCGGCTTCAAGG TTAGCCAGGCGAACTGTGGCCGGCGACAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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