Protein ID | Ophio5|4099 |
Gene name | |
Location | scaffold_320:14102..15773 |
Strand | - |
Gene length (bp) | 1671 |
Transcript length (bp) | 1671 |
Coding sequence length (bp) | 1668 |
Protein length (aa) | 556 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10998 | DUF2838 | Protein of unknown function (DUF2838) | 1.9E-45 | 168 | 278 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O94673|YG75_SCHPO | Uncharacterized membrane protein C776.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC776.05 PE=4 SV=2 | 60 | 456 | 9.0E-101 |
sp|P48236|YG3L_YEAST | Uncharacterized membrane protein YGR149W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGR149W PE=1 SV=1 | 79 | 458 | 3.0E-71 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Endoplasmic reticulum|Golgi apparatus | Signal peptide|Transmembrane domain | 0.0966 | 0.2381 | 0.0239 | 0.2221 | 0.0944 | 0.0156 | 0.8769 | 0.332 | 0.7953 | 0.0192 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 174 | 196 | 22 |
2 | 216 | 238 | 22 |
3 | 245 | 264 | 19 |
4 | 279 | 298 | 19 |
5 | 319 | 341 | 22 |
6 | 389 | 411 | 22 |
7 | 418 | 440 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 5071 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|4099 MDSEKQARELDASSDPEADAEPDVPMPPGLSTDGAASPESLVLEDTAPSRRRLSRNPSYSESSSHQDDWDSLPPL DRLTVLDFLDNLALPQQLEKLQKGISAQKEKVRRSKDALKSKTQLARDRMVEEWRRRAPSADEQLERYKMRMRRR VDKLGQHWSDTKAISIREKISFICGVMNIFISGYLIGGFPQYFHIWYTAQLVYFMPLRFFTYHRQGYHYFLADLC YFVNVLLSLSIWVFPSSKRLFTAAYCLAFGNNAVAIIMWRNSLVFHSLDKVTSLFIHIMPCATLHCLVHLLPAEQ QERRFPAIWTIRNSTPDSPTAYANVTSMLTWSTIPYVLWQLSYYFLITVRRREKIAAGRPTSFTWMRRSYSQTWI GKLVISLPDTLHEPAFMMIQYSYAALTMLPCPLWFVSRLASSVFLLVLFAWSIYNGSTYYIDVFGKRFQKELEAM KAEVSKWQNTPDLALQSPLMTPHHEEAPTQTSTRKDAHSSDSTAERKIDHSPASGDPLPDTNKLSSVGLEQIPLL DESPKSTAVCPEGVVQNATQRRSFQGGIEVA |
Coding | >Ophio5|4099 ATGGATTCTGAGAAGCAGGCCAGAGAGCTTGACGCGAGTTCCGATCCCGAGGCAGATGCGGAGCCCGACGTCCCG ATGCCACCCGGGCTGTCGACCGACGGCGCTGCCTCTCCCGAGTCGCTGGTCCTGGAGGACACCGCTCCGAGCCGG CGGAGGCTTTCGCGGAATCCGTCGTACTCCGAAAGCAGCTCGCATCAAGACGACTGGGACTCTCTACCCCCGCTC GACAGGCTGACCGTCCTTGACTTCCTCGACAACCTCGCGCTGCCGCAGCAGCTCGAGAAACTCCAAAAAGGCATC TCAGCCCAGAAGGAGAAAGTGCGACGGTCCAAAGATGCTCTCAAGTCCAAAACACAGCTTGCCCGCGATCGCATG GTGGAAGAGTGGCGTCGTCGCGCCCCTTCGGCCGATGAGCAGCTTGAGCGGTACAAGATGCGCATGCGCCGCCGC GTCGATAAACTCGGGCAGCACTGGAGCGACACAAAGGCCATCAGCATACGCGAAAAGATATCCTTCATCTGCGGC GTCATGAACATCTTCATCAGCGGCTACCTGATTGGCGGCTTTCCCCAATATTTCCACATCTGGTATACGGCTCAG CTTGTCTATTTCATGCCCCTCCGCTTTTTCACATACCATCGGCAAGGCTACCACTACTTTCTCGCCGACCTCTGC TACTTCGTCAATGTGTTGCTGAGTCTCAGCATTTGGGTCTTTCCCTCCTCCAAGCGCCTCTTCACCGCCGCTTAC TGCCTGGCTTTTGGCAACAATGCCGTGGCAATCATCATGTGGAGAAATTCTCTCGTCTTCCACAGCCTCGACAAA GTCACCTCGCTCTTCATCCACATCATGCCATGCGCCACGCTTCACTGCCTCGTCCATCTCCTGCCCGCTGAGCAG CAGGAGCGCAGGTTTCCCGCCATCTGGACCATCAGAAACTCGACTCCTGACTCGCCGACGGCTTACGCAAACGTC ACTTCCATGTTGACCTGGAGCACTATCCCCTACGTCTTATGGCAGCTGAGTTACTACTTCCTGATCACGGTCCGT CGCCGAGAGAAGATTGCCGCCGGGCGGCCTACGTCCTTCACCTGGATGCGCCGATCCTACTCCCAGACCTGGATA GGCAAGCTGGTAATATCTCTACCAGACACGTTGCACGAGCCGGCTTTCATGATGATCCAGTACAGCTACGCTGCG TTGACCATGCTACCATGTCCCCTGTGGTTTGTAAGCCGTCTCGCCTCTTCTGTCTTCCTCTTGGTGCTCTTTGCC TGGAGCATATACAATGGCTCAACCTATTACATCGATGTCTTCGGCAAGCGCTTCCAGAAGGAGCTCGAAGCCATG AAAGCCGAGGTCTCGAAATGGCAAAATACACCGGATCTGGCCCTCCAATCCCCATTGATGACTCCGCATCACGAG GAGGCCCCTACCCAGACATCTACGCGGAAGGATGCGCACTCGTCAGACTCGACCGCCGAAAGGAAGATAGACCAC AGCCCGGCAAGCGGTGATCCTTTGCCAGATACAAACAAACTTTCCAGTGTGGGACTCGAGCAAATACCGCTTCTG GACGAGAGTCCGAAATCGACAGCCGTATGCCCCGAGGGCGTTGTTCAGAATGCCACTCAGAGGAGAAGCTTTCAA GGCGGCATAGAGGTCGCG |
Transcript | >Ophio5|4099 ATGGATTCTGAGAAGCAGGCCAGAGAGCTTGACGCGAGTTCCGATCCCGAGGCAGATGCGGAGCCCGACGTCCCG ATGCCACCCGGGCTGTCGACCGACGGCGCTGCCTCTCCCGAGTCGCTGGTCCTGGAGGACACCGCTCCGAGCCGG CGGAGGCTTTCGCGGAATCCGTCGTACTCCGAAAGCAGCTCGCATCAAGACGACTGGGACTCTCTACCCCCGCTC GACAGGCTGACCGTCCTTGACTTCCTCGACAACCTCGCGCTGCCGCAGCAGCTCGAGAAACTCCAAAAAGGCATC TCAGCCCAGAAGGAGAAAGTGCGACGGTCCAAAGATGCTCTCAAGTCCAAAACACAGCTTGCCCGCGATCGCATG GTGGAAGAGTGGCGTCGTCGCGCCCCTTCGGCCGATGAGCAGCTTGAGCGGTACAAGATGCGCATGCGCCGCCGC GTCGATAAACTCGGGCAGCACTGGAGCGACACAAAGGCCATCAGCATACGCGAAAAGATATCCTTCATCTGCGGC GTCATGAACATCTTCATCAGCGGCTACCTGATTGGCGGCTTTCCCCAATATTTCCACATCTGGTATACGGCTCAG CTTGTCTATTTCATGCCCCTCCGCTTTTTCACATACCATCGGCAAGGCTACCACTACTTTCTCGCCGACCTCTGC TACTTCGTCAATGTGTTGCTGAGTCTCAGCATTTGGGTCTTTCCCTCCTCCAAGCGCCTCTTCACCGCCGCTTAC TGCCTGGCTTTTGGCAACAATGCCGTGGCAATCATCATGTGGAGAAATTCTCTCGTCTTCCACAGCCTCGACAAA GTCACCTCGCTCTTCATCCACATCATGCCATGCGCCACGCTTCACTGCCTCGTCCATCTCCTGCCCGCTGAGCAG CAGGAGCGCAGGTTTCCCGCCATCTGGACCATCAGAAACTCGACTCCTGACTCGCCGACGGCTTACGCAAACGTC ACTTCCATGTTGACCTGGAGCACTATCCCCTACGTCTTATGGCAGCTGAGTTACTACTTCCTGATCACGGTCCGT CGCCGAGAGAAGATTGCCGCCGGGCGGCCTACGTCCTTCACCTGGATGCGCCGATCCTACTCCCAGACCTGGATA GGCAAGCTGGTAATATCTCTACCAGACACGTTGCACGAGCCGGCTTTCATGATGATCCAGTACAGCTACGCTGCG TTGACCATGCTACCATGTCCCCTGTGGTTTGTAAGCCGTCTCGCCTCTTCTGTCTTCCTCTTGGTGCTCTTTGCC TGGAGCATATACAATGGCTCAACCTATTACATCGATGTCTTCGGCAAGCGCTTCCAGAAGGAGCTCGAAGCCATG AAAGCCGAGGTCTCGAAATGGCAAAATACACCGGATCTGGCCCTCCAATCCCCATTGATGACTCCGCATCACGAG GAGGCCCCTACCCAGACATCTACGCGGAAGGATGCGCACTCGTCAGACTCGACCGCCGAAAGGAAGATAGACCAC AGCCCGGCAAGCGGTGATCCTTTGCCAGATACAAACAAACTTTCCAGTGTGGGACTCGAGCAAATACCGCTTCTG GACGAGAGTCCGAAATCGACAGCCGTATGCCCCGAGGGCGTTGTTCAGAATGCCACTCAGAGGAGAAGCTTTCAA GGCGGCATAGAGGTCGCGTGA |
Gene | >Ophio5|4099 ATGGATTCTGAGAAGCAGGCCAGAGAGCTTGACGCGAGTTCCGATCCCGAGGCAGATGCGGAGCCCGACGTCCCG ATGCCACCCGGGCTGTCGACCGACGGCGCTGCCTCTCCCGAGTCGCTGGTCCTGGAGGACACCGCTCCGAGCCGG CGGAGGCTTTCGCGGAATCCGTCGTACTCCGAAAGCAGCTCGCATCAAGACGACTGGGACTCTCTACCCCCGCTC GACAGGCTGACCGTCCTTGACTTCCTCGACAACCTCGCGCTGCCGCAGCAGCTCGAGAAACTCCAAAAAGGCATC TCAGCCCAGAAGGAGAAAGTGCGACGGTCCAAAGATGCTCTCAAGTCCAAAACACAGCTTGCCCGCGATCGCATG GTGGAAGAGTGGCGTCGTCGCGCCCCTTCGGCCGATGAGCAGCTTGAGCGGTACAAGATGCGCATGCGCCGCCGC GTCGATAAACTCGGGCAGCACTGGAGCGACACAAAGGCCATCAGCATACGCGAAAAGATATCCTTCATCTGCGGC GTCATGAACATCTTCATCAGCGGCTACCTGATTGGCGGCTTTCCCCAATATTTCCACATCTGGTATACGGCTCAG CTTGTCTATTTCATGCCCCTCCGCTTTTTCACATACCATCGGCAAGGCTACCACTACTTTCTCGCCGACCTCTGC TACTTCGTCAATGTGTTGCTGAGTCTCAGCATTTGGGTCTTTCCCTCCTCCAAGCGCCTCTTCACCGCCGCTTAC TGCCTGGCTTTTGGCAACAATGCCGTGGCAATCATCATGTGGAGAAATTCTCTCGTCTTCCACAGCCTCGACAAA GTCACCTCGCTCTTCATCCACATCATGCCATGCGCCACGCTTCACTGCCTCGTCCATCTCCTGCCCGCTGAGCAG CAGGAGCGCAGGTTTCCCGCCATCTGGACCATCAGAAACTCGACTCCTGACTCGCCGACGGCTTACGCAAACGTC ACTTCCATGTTGACCTGGAGCACTATCCCCTACGTCTTATGGCAGCTGAGTTACTACTTCCTGATCACGGTCCGT CGCCGAGAGAAGATTGCCGCCGGGCGGCCTACGTCCTTCACCTGGATGCGCCGATCCTACTCCCAGACCTGGATA GGCAAGCTGGTAATATCTCTACCAGACACGTTGCACGAGCCGGCTTTCATGATGATCCAGTACAGCTACGCTGCG TTGACCATGCTACCATGTCCCCTGTGGTTTGTAAGCCGTCTCGCCTCTTCTGTCTTCCTCTTGGTGCTCTTTGCC TGGAGCATATACAATGGCTCAACCTATTACATCGATGTCTTCGGCAAGCGCTTCCAGAAGGAGCTCGAAGCCATG AAAGCCGAGGTCTCGAAATGGCAAAATACACCGGATCTGGCCCTCCAATCCCCATTGATGACTCCGCATCACGAG GAGGCCCCTACCCAGACATCTACGCGGAAGGATGCGCACTCGTCAGACTCGACCGCCGAAAGGAAGATAGACCAC AGCCCGGCAAGCGGTGATCCTTTGCCAGATACAAACAAACTTTCCAGTGTGGGACTCGAGCAAATACCGCTTCTG GACGAGAGTCCGAAATCGACAGCCGTATGCCCCGAGGGCGTTGTTCAGAATGCCACTCAGAGGAGAAGCTTTCAA GGCGGCATAGAGGTCGCGTGA |