Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|4078
Gene name
Location	scaffold_32:17485..18721
Strand	-
Gene length (bp)	1236
Transcript length (bp)	1236
Coding sequence length (bp)	1233
Protein length (aa)	411

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01979	Amidohydro_1	Amidohydrolase family	1.4E-28	77	371
PF07969	Amidohydro_3	Amidohydrolase family	6.8E-10	258	371

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|B0K2W0\|MTAD_THEPX	5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Thermoanaerobacter sp. (strain X514) GN=mtaD PE=3 SV=1	27	372	2.0E-07
sp\|B0K8R8\|MTAD_THEP3	5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=mtaD PE=3 SV=1	27	372	2.0E-07
sp\|C5DA20\|HUTI_GEOSW	Imidazolonepropionase OS=Geobacillus sp. (strain WCH70) GN=hutI PE=3 SV=1	261	374	7.0E-06

GO

GO Term	Description	Terminal node
GO:0016787	hydrolase activity	Yes
GO:0003824	catalytic activity	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 25	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|4078 MQSPLMLLKAASLLALTLVTRVQSFSITNVTIVDVETGQLRPNQDIVVEGNTIALIEEASTKPTAAKEEDVDGTG KFAIPGLSDMHVHAYFSNNPATFKIGDNLTMPLFVANGVTTVRDLGSNLEAITSARDRIAEHQLVGPRVFLTGPM LDGKESPFQTAIKVGTPEEARQAVENLTDSGVDFIKVHLKLSRQVFDEVARACKDEEIVFGGHVPDAIDAQYAID MGMGFIEHMSRLEEADGNVTEAIQEKHIWQCPTLKLAPAKQRFQLTKALFDAGAPMVAGTDSPAGQKLCPGVSLL DELELMNRAGLTELQTLQTATRNAASMLGKDSDMGTIEDGKLADIVLLDRNPLDSISNIRKIDTVIADGRVFSRE KLRTMLAGANRLRQCNPQGTIAARDLLSAGPSCCSI
Coding	>Ophio5\|4078 ATGCAATCACCTTTAATGTTGTTGAAAGCGGCCTCGTTGCTGGCATTGACACTCGTTACAAGAGTGCAGTCATTC TCCATAACCAACGTCACCATCGTCGATGTCGAGACGGGCCAACTGCGTCCTAACCAGGACATTGTTGTCGAGGGT AACACGATTGCTCTCATTGAAGAAGCCAGTACGAAACCAACAGCGGCAAAAGAGGAAGACGTTGACGGAACGGGA AAGTTTGCCATTCCGGGCCTCAGCGATATGCACGTTCACGCATACTTTAGCAACAATCCCGCCACCTTCAAGATT GGAGATAATCTGACGATGCCGCTCTTTGTCGCCAACGGCGTCACGACCGTCCGCGATCTCGGCAGCAACCTGGAA GCCATCACTTCGGCACGCGACCGTATCGCGGAGCACCAGCTTGTCGGCCCGCGCGTCTTCTTGACGGGCCCCATG CTTGACGGCAAAGAATCACCCTTTCAGACGGCCATCAAGGTCGGAACGCCCGAGGAGGCGCGCCAAGCCGTGGAG AATCTCACGGACAGTGGCGTCGATTTCATCAAGGTCCATCTGAAGCTATCCAGACAAGTCTTTGACGAGGTGGCA CGTGCCTGCAAAGACGAGGAGATTGTCTTTGGCGGTCACGTTCCAGACGCGATTGACGCGCAATACGCCATTGAC ATGGGCATGGGCTTCATCGAGCACATGAGCCGGCTCGAAGAAGCAGACGGCAACGTGACCGAGGCCATCCAGGAG AAGCACATCTGGCAATGTCCCACCCTCAAGCTCGCCCCGGCCAAGCAACGCTTCCAGCTAACCAAGGCTCTATTC GACGCCGGTGCCCCGATGGTCGCAGGTACAGACTCTCCGGCCGGCCAGAAGCTGTGTCCCGGCGTCAGTCTCCTC GACGAGCTCGAGCTGATGAACCGGGCTGGCCTGACCGAGCTGCAGACGCTGCAGACGGCAACGAGAAACGCCGCC TCCATGTTGGGCAAGGATTCCGACATGGGGACGATTGAAGACGGAAAGCTGGCGGATATAGTCCTTCTGGACCGG AATCCGCTGGATAGCATCAGCAACATACGCAAGATTGATACCGTCATCGCCGATGGCCGCGTCTTTTCGCGGGAA AAGCTTCGGACCATGCTCGCCGGAGCGAATCGACTTCGCCAGTGCAATCCGCAAGGAACAATCGCCGCCAGGGAC CTGCTCAGTGCCGGCCCCTCGTGCTGTTCTATT
Transcript	>Ophio5\|4078 ATGCAATCACCTTTAATGTTGTTGAAAGCGGCCTCGTTGCTGGCATTGACACTCGTTACAAGAGTGCAGTCATTC TCCATAACCAACGTCACCATCGTCGATGTCGAGACGGGCCAACTGCGTCCTAACCAGGACATTGTTGTCGAGGGT AACACGATTGCTCTCATTGAAGAAGCCAGTACGAAACCAACAGCGGCAAAAGAGGAAGACGTTGACGGAACGGGA AAGTTTGCCATTCCGGGCCTCAGCGATATGCACGTTCACGCATACTTTAGCAACAATCCCGCCACCTTCAAGATT GGAGATAATCTGACGATGCCGCTCTTTGTCGCCAACGGCGTCACGACCGTCCGCGATCTCGGCAGCAACCTGGAA GCCATCACTTCGGCACGCGACCGTATCGCGGAGCACCAGCTTGTCGGCCCGCGCGTCTTCTTGACGGGCCCCATG CTTGACGGCAAAGAATCACCCTTTCAGACGGCCATCAAGGTCGGAACGCCCGAGGAGGCGCGCCAAGCCGTGGAG AATCTCACGGACAGTGGCGTCGATTTCATCAAGGTCCATCTGAAGCTATCCAGACAAGTCTTTGACGAGGTGGCA CGTGCCTGCAAAGACGAGGAGATTGTCTTTGGCGGTCACGTTCCAGACGCGATTGACGCGCAATACGCCATTGAC ATGGGCATGGGCTTCATCGAGCACATGAGCCGGCTCGAAGAAGCAGACGGCAACGTGACCGAGGCCATCCAGGAG AAGCACATCTGGCAATGTCCCACCCTCAAGCTCGCCCCGGCCAAGCAACGCTTCCAGCTAACCAAGGCTCTATTC GACGCCGGTGCCCCGATGGTCGCAGGTACAGACTCTCCGGCCGGCCAGAAGCTGTGTCCCGGCGTCAGTCTCCTC GACGAGCTCGAGCTGATGAACCGGGCTGGCCTGACCGAGCTGCAGACGCTGCAGACGGCAACGAGAAACGCCGCC TCCATGTTGGGCAAGGATTCCGACATGGGGACGATTGAAGACGGAAAGCTGGCGGATATAGTCCTTCTGGACCGG AATCCGCTGGATAGCATCAGCAACATACGCAAGATTGATACCGTCATCGCCGATGGCCGCGTCTTTTCGCGGGAA AAGCTTCGGACCATGCTCGCCGGAGCGAATCGACTTCGCCAGTGCAATCCGCAAGGAACAATCGCCGCCAGGGAC CTGCTCAGTGCCGGCCCCTCGTGCTGTTCTATTTAG
Gene	>Ophio5\|4078 ATGCAATCACCTTTAATGTTGTTGAAAGCGGCCTCGTTGCTGGCATTGACACTCGTTACAAGAGTGCAGTCATTC TCCATAACCAACGTCACCATCGTCGATGTCGAGACGGGCCAACTGCGTCCTAACCAGGACATTGTTGTCGAGGGT AACACGATTGCTCTCATTGAAGAAGCCAGTACGAAACCAACAGCGGCAAAAGAGGAAGACGTTGACGGAACGGGA AAGTTTGCCATTCCGGGCCTCAGCGATATGCACGTTCACGCATACTTTAGCAACAATCCCGCCACCTTCAAGATT GGAGATAATCTGACGATGCCGCTCTTTGTCGCCAACGGCGTCACGACCGTCCGCGATCTCGGCAGCAACCTGGAA GCCATCACTTCGGCACGCGACCGTATCGCGGAGCACCAGCTTGTCGGCCCGCGCGTCTTCTTGACGGGCCCCATG CTTGACGGCAAAGAATCACCCTTTCAGACGGCCATCAAGGTCGGAACGCCCGAGGAGGCGCGCCAAGCCGTGGAG AATCTCACGGACAGTGGCGTCGATTTCATCAAGGTCCATCTGAAGCTATCCAGACAAGTCTTTGACGAGGTGGCA CGTGCCTGCAAAGACGAGGAGATTGTCTTTGGCGGTCACGTTCCAGACGCGATTGACGCGCAATACGCCATTGAC ATGGGCATGGGCTTCATCGAGCACATGAGCCGGCTCGAAGAAGCAGACGGCAACGTGACCGAGGCCATCCAGGAG AAGCACATCTGGCAATGTCCCACCCTCAAGCTCGCCCCGGCCAAGCAACGCTTCCAGCTAACCAAGGCTCTATTC GACGCCGGTGCCCCGATGGTCGCAGGTACAGACTCTCCGGCCGGCCAGAAGCTGTGTCCCGGCGTCAGTCTCCTC GACGAGCTCGAGCTGATGAACCGGGCTGGCCTGACCGAGCTGCAGACGCTGCAGACGGCAACGAGAAACGCCGCC TCCATGTTGGGCAAGGATTCCGACATGGGGACGATTGAAGACGGAAAGCTGGCGGATATAGTCCTTCTGGACCGG AATCCGCTGGATAGCATCAGCAACATACGCAAGATTGATACCGTCATCGCCGATGGCCGCGTCTTTTCGCGGGAA AAGCTTCGGACCATGCTCGCCGGAGCGAATCGACTTCGCCAGTGCAATCCGCAAGGAACAATCGCCGCCAGGGAC CTGCTCAGTGCCGGCCCCTCGTGCTGTTCTATTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail