Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|4063
Gene name
Locationscaffold_318:4690..5500
Strand+
Gene length (bp)810
Transcript length (bp)810
Coding sequence length (bp)807
Protein length (aa) 269

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20150 2EXR 2EXR family 7.2E-08 5 64

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|4063
MDGRFTLFPKLPPELRREIWRFALDKNLTVTGFRRGKDDEEKPIYAVGQLPSDVGQSCYEARVVMRASHVLVEGL
GWIHFARHIFLYHGLLEDERLIDDVDECYHLFSRIQHLILDINPHRCDQLFNFIDTLRGSGVQLRSLIFVSPPID
PYHVSTRGPLTVEEWAQMKPVDIWPQPLSPELESPRLLSRKYWLQVDETDVLASPASGRHFRSFFRVFFQVLLYA
TNVLSQKDSTVFDPKPAFYLCSRDGLRARWEMRKHEEQGKGEQR
Coding >Ophio5|4063
ATGGACGGCCGTTTCACCCTTTTCCCGAAGCTCCCCCCCGAGCTTCGTCGGGAAATCTGGCGCTTCGCCTTGGAT
AAGAACTTGACCGTGACCGGCTTCAGACGCGGCAAAGATGATGAAGAAAAACCCATCTACGCCGTCGGTCAGCTC
CCTTCCGACGTCGGCCAAAGCTGCTACGAAGCCCGGGTTGTGATGCGAGCTTCACACGTCCTTGTCGAAGGACTC
GGATGGATTCATTTTGCCCGCCACATCTTTCTATACCACGGCCTTTTGGAGGATGAGAGGCTGATAGATGATGTG
GATGAATGCTATCATCTGTTTTCTCGCATCCAGCACCTCATACTCGACATCAACCCTCACAGATGTGACCAGCTT
TTCAACTTCATCGACACCCTCAGGGGCAGTGGTGTGCAGCTGCGCAGCCTGATCTTCGTGTCCCCACCCATCGAC
CCTTATCATGTGTCGACTCGAGGTCCTCTCACCGTCGAGGAATGGGCGCAGATGAAGCCGGTCGACATCTGGCCG
CAGCCGCTGAGCCCAGAGCTCGAATCTCCCAGGCTTCTTTCTCGCAAGTACTGGCTTCAGGTTGATGAGACAGAC
GTCCTTGCTTCACCAGCTTCTGGCCGCCATTTCCGCAGCTTCTTTCGCGTTTTCTTCCAAGTGCTTCTGTACGCG
ACCAACGTTCTCAGCCAGAAAGATTCCACCGTTTTCGACCCAAAGCCAGCCTTTTACCTGTGCTCCAGGGATGGA
TTGAGGGCACGATGGGAGATGCGAAAACATGAGGAACAAGGGAAGGGAGAACAAAGG
Transcript >Ophio5|4063
ATGGACGGCCGTTTCACCCTTTTCCCGAAGCTCCCCCCCGAGCTTCGTCGGGAAATCTGGCGCTTCGCCTTGGAT
AAGAACTTGACCGTGACCGGCTTCAGACGCGGCAAAGATGATGAAGAAAAACCCATCTACGCCGTCGGTCAGCTC
CCTTCCGACGTCGGCCAAAGCTGCTACGAAGCCCGGGTTGTGATGCGAGCTTCACACGTCCTTGTCGAAGGACTC
GGATGGATTCATTTTGCCCGCCACATCTTTCTATACCACGGCCTTTTGGAGGATGAGAGGCTGATAGATGATGTG
GATGAATGCTATCATCTGTTTTCTCGCATCCAGCACCTCATACTCGACATCAACCCTCACAGATGTGACCAGCTT
TTCAACTTCATCGACACCCTCAGGGGCAGTGGTGTGCAGCTGCGCAGCCTGATCTTCGTGTCCCCACCCATCGAC
CCTTATCATGTGTCGACTCGAGGTCCTCTCACCGTCGAGGAATGGGCGCAGATGAAGCCGGTCGACATCTGGCCG
CAGCCGCTGAGCCCAGAGCTCGAATCTCCCAGGCTTCTTTCTCGCAAGTACTGGCTTCAGGTTGATGAGACAGAC
GTCCTTGCTTCACCAGCTTCTGGCCGCCATTTCCGCAGCTTCTTTCGCGTTTTCTTCCAAGTGCTTCTGTACGCG
ACCAACGTTCTCAGCCAGAAAGATTCCACCGTTTTCGACCCAAAGCCAGCCTTTTACCTGTGCTCCAGGGATGGA
TTGAGGGCACGATGGGAGATGCGAAAACATGAGGAACAAGGGAAGGGAGAACAAAGGTAG
Gene >Ophio5|4063
ATGGACGGCCGTTTCACCCTTTTCCCGAAGCTCCCCCCCGAGCTTCGTCGGGAAATCTGGCGCTTCGCCTTGGAT
AAGAACTTGACCGTGACCGGCTTCAGACGCGGCAAAGATGATGAAGAAAAACCCATCTACGCCGTCGGTCAGCTC
CCTTCCGACGTCGGCCAAAGCTGCTACGAAGCCCGGGTTGTGATGCGAGCTTCACACGTCCTTGTCGAAGGACTC
GGATGGATTCATTTTGCCCGCCACATCTTTCTATACCACGGCCTTTTGGAGGATGAGAGGCTGATAGATGATGTG
GATGAATGCTATCATCTGTTTTCTCGCATCCAGCACCTCATACTCGACATCAACCCTCACAGATGTGACCAGCTT
TTCAACTTCATCGACACCCTCAGGGGCAGTGGTGTGCAGCTGCGCAGCCTGATCTTCGTGTCCCCACCCATCGAC
CCTTATCATGTGTCGACTCGAGGTCCTCTCACCGTCGAGGAATGGGCGCAGATGAAGCCGGTCGACATCTGGCCG
CAGCCGCTGAGCCCAGAGCTCGAATCTCCCAGGCTTCTTTCTCGCAAGTACTGGCTTCAGGTTGATGAGACAGAC
GTCCTTGCTTCACCAGCTTCTGGCCGCCATTTCCGCAGCTTCTTTCGCGTTTTCTTCCAAGTGCTTCTGTACGCG
ACCAACGTTCTCAGCCAGAAAGATTCCACCGTTTTCGACCCAAAGCCAGCCTTTTACCTGTGCTCCAGGGATGGA
TTGAGGGCACGATGGGAGATGCGAAAACATGAGGAACAAGGGAAGGGAGAACAAAGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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