Protein ID | Ophio5|4058 |
Gene name | |
Location | scaffold_317:17603..18485 |
Strand | + |
Gene length (bp) | 882 |
Transcript length (bp) | 690 |
Coding sequence length (bp) | 687 |
Protein length (aa) | 229 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01991 | vATP-synt_E | ATP synthase (E/31 kDa) subunit | 1.1E-66 | 21 | 219 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q01278|VATE_NEUCR | V-type proton ATPase subunit E OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=vma-4 PE=2 SV=1 | 1 | 229 | 2.0E-95 |
sp|O94072|VATE_CANAX | V-type proton ATPase subunit E OS=Candida albicans GN=VMA4 PE=3 SV=1 | 5 | 229 | 1.0E-65 |
sp|Q4R761|VATE1_MACFA | V-type proton ATPase subunit E 1 OS=Macaca fascicularis GN=ATP6V1E1 PE=2 SV=1 | 5 | 229 | 1.0E-60 |
sp|P36543|VATE1_HUMAN | V-type proton ATPase subunit E 1 OS=Homo sapiens GN=ATP6V1E1 PE=1 SV=1 | 5 | 229 | 1.0E-60 |
sp|P11019|VATE1_BOVIN | V-type proton ATPase subunit E 1 OS=Bos taurus GN=ATP6V1E1 PE=2 SV=1 | 5 | 229 | 7.0E-60 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q01278|VATE_NEUCR | V-type proton ATPase subunit E OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=vma-4 PE=2 SV=1 | 1 | 229 | 2.0E-95 |
sp|O94072|VATE_CANAX | V-type proton ATPase subunit E OS=Candida albicans GN=VMA4 PE=3 SV=1 | 5 | 229 | 1.0E-65 |
sp|Q4R761|VATE1_MACFA | V-type proton ATPase subunit E 1 OS=Macaca fascicularis GN=ATP6V1E1 PE=2 SV=1 | 5 | 229 | 1.0E-60 |
sp|P36543|VATE1_HUMAN | V-type proton ATPase subunit E 1 OS=Homo sapiens GN=ATP6V1E1 PE=1 SV=1 | 5 | 229 | 1.0E-60 |
sp|P11019|VATE1_BOVIN | V-type proton ATPase subunit E 1 OS=Bos taurus GN=ATP6V1E1 PE=2 SV=1 | 5 | 229 | 7.0E-60 |
sp|P50518|VATE1_MOUSE | V-type proton ATPase subunit E 1 OS=Mus musculus GN=Atp6v1e1 PE=1 SV=2 | 5 | 229 | 1.0E-59 |
sp|Q6PCU2|VATE1_RAT | V-type proton ATPase subunit E 1 OS=Rattus norvegicus GN=Atp6v1e1 PE=1 SV=1 | 5 | 229 | 2.0E-59 |
sp|P22203|VATE_YEAST | V-type proton ATPase subunit E OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VMA4 PE=1 SV=4 | 5 | 229 | 8.0E-57 |
sp|P31402|VATE_MANSE | V-type proton ATPase subunit E OS=Manduca sexta GN=VHA26 PE=2 SV=1 | 5 | 229 | 6.0E-56 |
sp|P54611|VATE_DROME | V-type proton ATPase subunit E OS=Drosophila melanogaster GN=Vha26 PE=2 SV=1 | 5 | 229 | 5.0E-53 |
sp|O13687|VATE_SCHPO | V-type proton ATPase subunit E OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vma4 PE=3 SV=1 | 5 | 227 | 3.0E-51 |
sp|Q9U1G5|VATE_HETSC | V-type proton ATPase subunit E OS=Heterodera schachtii PE=2 SV=1 | 5 | 229 | 5.0E-50 |
sp|O00780|VATE_DICDI | V-type proton ATPase subunit E OS=Dictyostelium discoideum GN=vatE PE=1 SV=1 | 6 | 229 | 1.0E-45 |
sp|Q96A05|VATE2_HUMAN | V-type proton ATPase subunit E 2 OS=Homo sapiens GN=ATP6V1E2 PE=1 SV=1 | 5 | 228 | 2.0E-42 |
sp|Q32LB7|VATE2_BOVIN | V-type proton ATPase subunit E 2 OS=Bos taurus GN=ATP6V1E2 PE=2 SV=1 | 5 | 228 | 3.0E-42 |
sp|Q9D593|VATE2_MOUSE | V-type proton ATPase subunit E 2 OS=Mus musculus GN=Atp6v1e2 PE=1 SV=1 | 5 | 228 | 3.0E-37 |
sp|Q9MB46|VATE_CITUN | V-type proton ATPase subunit E OS=Citrus unshiu GN=VATE PE=2 SV=1 | 6 | 221 | 9.0E-37 |
sp|Q9SWE7|VATE_CITLI | V-type proton ATPase subunit E OS=Citrus limon GN=VATE PE=2 SV=1 | 6 | 221 | 2.0E-35 |
sp|O23948|VATE_GOSHI | V-type proton ATPase subunit E OS=Gossypium hirsutum GN=VATE PE=2 SV=1 | 6 | 221 | 4.0E-35 |
sp|P0CAN7|VATE3_ARATH | V-type proton ATPase subunit E3 OS=Arabidopsis thaliana GN=VHA-E3 PE=2 SV=1 | 6 | 221 | 4.0E-35 |
sp|Q39258|VATE1_ARATH | V-type proton ATPase subunit E1 OS=Arabidopsis thaliana GN=VHA-E1 PE=1 SV=2 | 6 | 221 | 8.0E-35 |
sp|Q40272|VATE_MESCR | V-type proton ATPase subunit E OS=Mesembryanthemum crystallinum GN=VATE PE=2 SV=1 | 6 | 220 | 3.0E-32 |
sp|Q9C9Z8|VATE2_ARATH | V-type proton ATPase subunit E2 OS=Arabidopsis thaliana GN=VHA-E2 PE=2 SV=1 | 6 | 220 | 1.0E-31 |
sp|Q41396|VATE_SPIOL | V-type proton ATPase subunit E OS=Spinacia oleracea GN=VATE PE=2 SV=1 | 6 | 220 | 2.0E-31 |
sp|O06501|VATE_DESSY | V-type ATP synthase subunit E OS=Desulfurococcus sp. (strain SY) GN=atpE PE=3 SV=1 | 66 | 220 | 3.0E-10 |
sp|Q5JDS0|VATE_THEKO | V-type ATP synthase subunit E OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=atpE PE=3 SV=1 | 66 | 220 | 7.0E-10 |
sp|C6A5F1|VATE_THESM | V-type proton ATPase subunit E OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=atpE PE=3 SV=1 | 1 | 220 | 3.0E-09 |
sp|C5A333|VATE_THEGJ | V-type proton ATPase subunit E OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=atpE PE=3 SV=1 | 58 | 220 | 1.0E-07 |
sp|Q3J9F2|VATE_NITOC | V-type ATP synthase subunit E OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=atpE PE=3 SV=1 | 68 | 219 | 2.0E-07 |
sp|O57724|VATE_PYRHO | V-type ATP synthase subunit E OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=atpE PE=1 SV=1 | 1 | 220 | 4.0E-07 |
sp|A5UKB5|VATE_METS3 | V-type ATP synthase subunit E OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=atpE PE=3 SV=1 | 17 | 219 | 6.0E-07 |
sp|Q2NF84|VATE_METST | V-type ATP synthase subunit E OS=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) GN=atpE PE=3 SV=1 | 17 | 219 | 2.0E-06 |
sp|Q8U4A9|VATE_PYRFU | V-type ATP synthase subunit E OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=atpE PE=3 SV=1 | 66 | 220 | 2.0E-06 |
sp|B6YV11|VATE_THEON | V-type proton ATPase subunit E OS=Thermococcus onnurineus (strain NA1) GN=atpE PE=3 SV=1 | 66 | 220 | 4.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0046961 | proton-transporting ATPase activity, rotational mechanism | Yes |
GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | Yes |
GO:1902600 | proton transmembrane transport | Yes |
GO:0022853 | active ion transmembrane transporter activity | No |
GO:0034220 | ion transmembrane transport | No |
GO:0003674 | molecular_function | No |
GO:0042626 | ATPase-coupled transmembrane transporter activity | No |
GO:0051179 | localization | No |
GO:0006810 | transport | No |
GO:0019829 | ATPase-coupled cation transmembrane transporter activity | No |
GO:0055085 | transmembrane transport | No |
GO:0098662 | inorganic cation transmembrane transport | No |
GO:0051234 | establishment of localization | No |
GO:0032991 | protein-containing complex | No |
GO:0140657 | ATP-dependent activity | No |
GO:0022804 | active transmembrane transporter activity | No |
GO:0098655 | cation transmembrane transport | No |
GO:0008150 | biological_process | No |
GO:0005575 | cellular_component | No |
GO:0022857 | transmembrane transporter activity | No |
GO:0015399 | primary active transmembrane transporter activity | No |
GO:0015078 | proton transmembrane transporter activity | No |
GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
GO:0006812 | cation transport | No |
GO:0006811 | ion transport | No |
GO:0098660 | inorganic ion transmembrane transport | No |
GO:0008324 | cation transmembrane transporter activity | No |
GO:0005215 | transporter activity | No |
GO:0042625 | ATPase-coupled ion transmembrane transporter activity | No |
GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | No |
GO:0009987 | cellular process | No |
GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | No |
GO:0015075 | ion transmembrane transporter activity | No |
GO:0022890 | inorganic cation transmembrane transporter activity | No |
GO:0098796 | membrane protein complex | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.5976 | 0.3391 | 0.055 | 0.1526 | 0.3416 | 0.002 | 0.0556 | 0.404 | 0.0375 | 0.0033 |
Orthofinder run ID | 4 |
Orthogroup | 3618 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|4058 MSQHALSDQQVDNELRKMTAFIKQEAMEKAREIEIKANEEFEIEKSKLVRQETDSIDSQYDKKFKQATMSQQITR STVANKTRLKVLGARQELLDDIFESAEKQLADGTKDKPKYQKILVGLILEGLYALNEKQVVLRARKKDHDMVKKA ADEASKTYKKEIGSDVDVKISDESPLPENSAGGVIIVGGGGKIDINNTFETRLDLLKTSAAPAVRQSLFGKNPNR KFYD |
Coding | >Ophio5|4058 ATGTCACAACACGCCCTTTCCGACCAACAGGTCGACAATGAGCTCCGCAAGATGACAGCCTTCATCAAGCAAGAA GCCATGGAGAAAGCGCGCGAGATCGAAATCAAAGCCAACGAAGAGTTCGAAATCGAAAAATCCAAGCTCGTCCGT CAGGAGACCGACTCCATCGATAGCCAGTACGACAAAAAGTTCAAGCAAGCCACCATGTCTCAGCAAATCACCCGC TCCACCGTCGCCAATAAGACGCGCCTCAAGGTTCTCGGCGCCCGACAGGAGCTTCTCGACGACATCTTCGAGTCG GCTGAGAAGCAGCTCGCTGATGGTACCAAGGATAAGCCCAAGTATCAAAAGATTCTCGTCGGCCTTATCCTCGAG GGCCTCTACGCCCTCAACGAGAAGCAAGTGGTGCTGCGCGCTCGCAAGAAGGATCACGATATGGTTAAGAAGGCG GCTGATGAGGCGTCCAAGACGTACAAGAAGGAGATTGGCTCTGATGTCGATGTTAAGATCAGCGACGAGAGCCCC CTTCCTGAAAACTCCGCCGGCGGAGTCATCATCGTCGGTGGAGGCGGCAAGATCGACATCAACAACACCTTCGAG ACGAGACTGGACCTTCTCAAGACATCGGCTGCCCCCGCCGTGCGCCAGTCTCTATTTGGCAAGAACCCGAACCGC AAGTTTTACGAC |
Transcript | >Ophio5|4058 ATGTCACAACACGCCCTTTCCGACCAACAGGTCGACAATGAGCTCCGCAAGATGACAGCCTTCATCAAGCAAGAA GCCATGGAGAAAGCGCGCGAGATCGAAATCAAAGCCAACGAAGAGTTCGAAATCGAAAAATCCAAGCTCGTCCGT CAGGAGACCGACTCCATCGATAGCCAGTACGACAAAAAGTTCAAGCAAGCCACCATGTCTCAGCAAATCACCCGC TCCACCGTCGCCAATAAGACGCGCCTCAAGGTTCTCGGCGCCCGACAGGAGCTTCTCGACGACATCTTCGAGTCG GCTGAGAAGCAGCTCGCTGATGGTACCAAGGATAAGCCCAAGTATCAAAAGATTCTCGTCGGCCTTATCCTCGAG GGCCTCTACGCCCTCAACGAGAAGCAAGTGGTGCTGCGCGCTCGCAAGAAGGATCACGATATGGTTAAGAAGGCG GCTGATGAGGCGTCCAAGACGTACAAGAAGGAGATTGGCTCTGATGTCGATGTTAAGATCAGCGACGAGAGCCCC CTTCCTGAAAACTCCGCCGGCGGAGTCATCATCGTCGGTGGAGGCGGCAAGATCGACATCAACAACACCTTCGAG ACGAGACTGGACCTTCTCAAGACATCGGCTGCCCCCGCCGTGCGCCAGTCTCTATTTGGCAAGAACCCGAACCGC AAGTTTTACGACTAG |
Gene | >Ophio5|4058 ATGTCACAACACGCCCTTTCCGACCAACAGGTACGTCCCATTTCCCAACGATAACCGACGAGCCTTCACCTTTTT CACCCTCTTCATACCCGCGGACATAGCCCACCGACTCCTCCGAAGACGCCGGACAATGGCTAACCGTCGGCGCCA GGTCGACAATGAGCTCCGCAAGATGACAGCCTTCATCAAGCAAGAAGCCATGGAGAAAGCGCGCGAGATCGAAAT CAAAGCCAACGAAGAGTTCGAAATCGAAAAATCCAAGCTCGTCCGTCAGGAGACCGACTCCATCGATAGCCAGTA CGACAAAAAGTTCAAGCAAGCCACCATGTCTCAGCAAATCACCCGCTCCACCGTCGCCAATAAGACGCGCCTCAA GGTTCTCGGCGCCCGACAGGAGCTTCTCGACGACATCTTCGAGTCGGCTGAGAAGCAGCTCGCTGATGGTACCAA GGATAAGCCCAAGTATCAAAAGATTCTCGTCGGCCTTATCCTCGAGGGCCTCTACGCCCTCAACGAGAAGCAAGT GGTGCTGCGCGCTCGCAAGAAGGATCACGATATGGTTAAGAAGGCGGCTGATGAGGCGTCCAAGACGTACAAGAA GGAGATTGGCTCTGATGTCGATGTTAAGATCAGCGACGAGAGCCCCCTTCCTGAAAACTCGTCAGTCTTCCCCCT TGCCCCCTTGCTCTTCCCCTTTCTCTGCGGCTCGAGTCCTAAAATATCGCTCACAGCGCCGGCGGAGTCATCATC GTCGGTGGAGGCGGCAAGATCGACATCAACAACACCTTCGAGACGAGACTGGACCTTCTCAAGACATCGGCTGCC CCCGCCGTGCGCCAGTCTCTATTTGGCAAGAACCCGAACCGCAAGTTTTACGACTAG |