Protein ID | Ophio5|4045 |
Gene name | |
Location | scaffold_316:12338..14367 |
Strand | + |
Gene length (bp) | 2029 |
Transcript length (bp) | 1914 |
Coding sequence length (bp) | 1911 |
Protein length (aa) | 637 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05536 | Neurochondrin | Neurochondrin | 2.8E-85 | 19 | 520 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O74447|YCG2_SCHPO | Uncharacterized protein C16C4.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC16C4.02c PE=1 SV=1 | 305 | 568 | 1.0E-10 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 38.43 | 21.00 | 55.86 |
CcL | In ants, during behavior modification | 60.97 | 33.06 | 88.87 |
CcD | In ants, recently dead | 41.69 | 22.84 | 60.54 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.036104 | yes |
SC16a | CcD | 0.757490 | no |
CcL | CcD | 0.090250 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|4045 MDKPQPAQKPSADPPPVDAASLANIQSLLQARDDTQRFVGLALLKSVLDNSQLLRQDEAVIKSLWESLSAKFLDR LLRTGSNPANQHASDMLDLAVSVLHTFAALLPESSRADAKFTARIPGLVGTILCSSDETIGLTLQLLHTLVSLPQ GARILVNCQDLSPLTENAPSHPLVLDILGFAWLNGMADAENRLVLSQKIDATLKSLSSSFTGTDAVIFLEFLGTF LRQADPAVLPKDPKWLSKVCGYIHSLAMSRPTPEARSAYTNAAASLVQIYPNQAPKLLFTDDRSADKAPAYLLMN LLLIDIRSSAPTLLGQLNARDSAATTRRLASAFDVVCIFVGFLARFLDGDCQDDLVMSPDSLLKIRKGISDTMSV TIEYLRDRWDASVAGAMGLHPDARVGNAETATGSHRTLAWDSIANSADDDPLVLSAVRTLALWLREDENELLRKE ATGLTDMFMDLYRGSAPGKLDFRSPILVALEALVELDKGRDLLLRHDGWQILCKDLTDILNDTSTTNDKDGTSRG IEIVRVLVQVVEQESTGTAEAWMDLITTVAAWDVPVQERPLEAKEFQLAVLELCCALLLGASNGMRNRYRHSFKA VAGIATRMRPLMACDGRLSGPMQDVLETLNGNVSKSD |
Coding | >Ophio5|4045 ATGGACAAGCCACAGCCGGCTCAAAAGCCCAGCGCTGATCCGCCACCCGTCGATGCCGCCAGCTTGGCCAACATC CAGAGCCTCCTACAGGCACGCGACGACACGCAGAGATTCGTCGGTCTGGCTCTGCTCAAGTCTGTTCTCGACAAC TCGCAGCTACTTCGCCAGGACGAAGCCGTCATCAAGTCGCTATGGGAGAGCCTGTCTGCCAAGTTCTTAGACAGG CTGCTACGCACAGGGTCCAACCCGGCAAATCAACACGCAAGCGACATGCTGGACCTGGCCGTCTCCGTCTTGCAC ACATTTGCTGCCCTACTGCCCGAGAGTTCGCGGGCAGATGCCAAGTTTACTGCCAGAATACCTGGCCTGGTCGGA ACCATCCTGTGCAGTTCCGACGAGACTATCGGCCTCACCCTGCAGCTCCTTCATACACTTGTCAGCTTGCCTCAA GGGGCTCGCATTCTCGTCAACTGCCAGGATCTGAGCCCCCTCACCGAGAATGCGCCATCGCATCCCCTCGTCCTA GACATCCTGGGCTTTGCATGGCTCAATGGCATGGCGGACGCCGAGAATAGACTTGTGCTTTCACAAAAAATAGAC GCAACCCTGAAAAGCCTCTCCTCCTCTTTCACCGGCACGGATGCCGTCATATTCCTTGAGTTTCTTGGAACTTTC CTGCGACAGGCGGATCCTGCTGTATTGCCCAAAGACCCCAAGTGGCTCAGTAAAGTATGCGGTTACATTCACAGT CTTGCCATGAGTCGACCGACTCCTGAAGCAAGGTCTGCCTACACGAATGCTGCCGCGTCTCTTGTCCAGATCTAT CCAAATCAGGCCCCGAAGCTCCTATTCACGGATGATCGTAGCGCAGACAAAGCTCCCGCCTATCTTCTCATGAAT CTCCTACTCATCGATATCCGCTCATCCGCGCCGACGCTTCTGGGCCAGCTCAACGCGCGAGACAGCGCTGCAACG ACAAGACGATTGGCGTCGGCATTCGACGTCGTCTGCATCTTTGTGGGATTCCTGGCTCGATTTCTCGACGGTGAC TGTCAAGATGACTTGGTCATGTCTCCGGACAGTCTCCTCAAGATTCGAAAGGGTATATCAGACACAATGTCGGTA ACGATTGAGTATCTTCGAGATCGGTGGGATGCCTCGGTCGCCGGGGCCATGGGTTTGCATCCCGACGCCCGAGTT GGCAACGCCGAGACGGCAACCGGCTCACACCGAACCTTGGCATGGGACTCGATTGCGAACTCGGCCGATGACGAT CCGTTGGTACTGTCCGCTGTCCGCACGCTGGCGCTCTGGCTGAGGGAGGATGAAAACGAGCTGTTGCGCAAGGAG GCGACGGGATTAACGGACATGTTTATGGATCTCTACCGGGGGAGCGCGCCGGGAAAGCTCGACTTCAGGTCGCCC ATACTCGTTGCACTGGAGGCCTTGGTCGAACTGGATAAGGGGCGGGACCTCCTCCTCCGCCATGATGGCTGGCAG ATCCTTTGCAAAGATCTGACTGACATACTCAACGACACATCAACCACCAACGACAAGGACGGGACCTCTCGCGGC ATCGAAATCGTCCGTGTCCTCGTTCAGGTCGTGGAACAGGAGTCAACCGGTACGGCAGAGGCGTGGATGGATCTG ATTACCACCGTTGCCGCCTGGGACGTACCCGTTCAGGAGCGGCCGCTCGAGGCGAAAGAGTTTCAACTTGCGGTG TTGGAATTGTGTTGCGCGCTGCTGCTGGGGGCGAGCAACGGTATGCGAAACAGATATAGGCACTCGTTCAAAGCA GTCGCGGGTATCGCAACGCGGATGAGGCCCTTGATGGCGTGTGATGGTCGCCTGAGCGGGCCGATGCAGGATGTC CTGGAGACCTTGAACGGCAACGTCTCGAAGAGCGAC |
Transcript | >Ophio5|4045 ATGGACAAGCCACAGCCGGCTCAAAAGCCCAGCGCTGATCCGCCACCCGTCGATGCCGCCAGCTTGGCCAACATC CAGAGCCTCCTACAGGCACGCGACGACACGCAGAGATTCGTCGGTCTGGCTCTGCTCAAGTCTGTTCTCGACAAC TCGCAGCTACTTCGCCAGGACGAAGCCGTCATCAAGTCGCTATGGGAGAGCCTGTCTGCCAAGTTCTTAGACAGG CTGCTACGCACAGGGTCCAACCCGGCAAATCAACACGCAAGCGACATGCTGGACCTGGCCGTCTCCGTCTTGCAC ACATTTGCTGCCCTACTGCCCGAGAGTTCGCGGGCAGATGCCAAGTTTACTGCCAGAATACCTGGCCTGGTCGGA ACCATCCTGTGCAGTTCCGACGAGACTATCGGCCTCACCCTGCAGCTCCTTCATACACTTGTCAGCTTGCCTCAA GGGGCTCGCATTCTCGTCAACTGCCAGGATCTGAGCCCCCTCACCGAGAATGCGCCATCGCATCCCCTCGTCCTA GACATCCTGGGCTTTGCATGGCTCAATGGCATGGCGGACGCCGAGAATAGACTTGTGCTTTCACAAAAAATAGAC GCAACCCTGAAAAGCCTCTCCTCCTCTTTCACCGGCACGGATGCCGTCATATTCCTTGAGTTTCTTGGAACTTTC CTGCGACAGGCGGATCCTGCTGTATTGCCCAAAGACCCCAAGTGGCTCAGTAAAGTATGCGGTTACATTCACAGT CTTGCCATGAGTCGACCGACTCCTGAAGCAAGGTCTGCCTACACGAATGCTGCCGCGTCTCTTGTCCAGATCTAT CCAAATCAGGCCCCGAAGCTCCTATTCACGGATGATCGTAGCGCAGACAAAGCTCCCGCCTATCTTCTCATGAAT CTCCTACTCATCGATATCCGCTCATCCGCGCCGACGCTTCTGGGCCAGCTCAACGCGCGAGACAGCGCTGCAACG ACAAGACGATTGGCGTCGGCATTCGACGTCGTCTGCATCTTTGTGGGATTCCTGGCTCGATTTCTCGACGGTGAC TGTCAAGATGACTTGGTCATGTCTCCGGACAGTCTCCTCAAGATTCGAAAGGGTATATCAGACACAATGTCGGTA ACGATTGAGTATCTTCGAGATCGGTGGGATGCCTCGGTCGCCGGGGCCATGGGTTTGCATCCCGACGCCCGAGTT GGCAACGCCGAGACGGCAACCGGCTCACACCGAACCTTGGCATGGGACTCGATTGCGAACTCGGCCGATGACGAT CCGTTGGTACTGTCCGCTGTCCGCACGCTGGCGCTCTGGCTGAGGGAGGATGAAAACGAGCTGTTGCGCAAGGAG GCGACGGGATTAACGGACATGTTTATGGATCTCTACCGGGGGAGCGCGCCGGGAAAGCTCGACTTCAGGTCGCCC ATACTCGTTGCACTGGAGGCCTTGGTCGAACTGGATAAGGGGCGGGACCTCCTCCTCCGCCATGATGGCTGGCAG ATCCTTTGCAAAGATCTGACTGACATACTCAACGACACATCAACCACCAACGACAAGGACGGGACCTCTCGCGGC ATCGAAATCGTCCGTGTCCTCGTTCAGGTCGTGGAACAGGAGTCAACCGGTACGGCAGAGGCGTGGATGGATCTG ATTACCACCGTTGCCGCCTGGGACGTACCCGTTCAGGAGCGGCCGCTCGAGGCGAAAGAGTTTCAACTTGCGGTG TTGGAATTGTGTTGCGCGCTGCTGCTGGGGGCGAGCAACGGTATGCGAAACAGATATAGGCACTCGTTCAAAGCA GTCGCGGGTATCGCAACGCGGATGAGGCCCTTGATGGCGTGTGATGGTCGCCTGAGCGGGCCGATGCAGGATGTC CTGGAGACCTTGAACGGCAACGTCTCGAAGAGCGACTGA |
Gene | >Ophio5|4045 ATGGACAAGCCACAGCCGGCTCAAAAGCCCAGCGCTGATCCGCCACCCGTCGATGCCGCCAGCTTGGCCAACATC CAGAGCCTCCTACAGGCACGCGACGACACGCAGAGATTCGTCGGTCTGGCTCTGCTCAAGTCTGTTCTCGACAAC TCGCAGCTACTTCGCCAGGACGAAGCCGTCATCAAGTCGCTATGGGAGAGCCTGTCTGCCAAGTTCTTAGACAGG CTGCTACGCACAGGGTCCAACCCGGCAAATCAACACGCAAGCGACATGCTGGACCTGGCCGTCTCCGTCTTGCAC ACATTTGCTGCCCTACTGCCCGAGAGTTCGCGGGCAGATGCCAAGTTTACTGCCAGAATACCTGGCCTGGTCGGA ACCATCCTGTGCAGGTGAGAAGTCTCCAATCAGCCCTTTTGCTCTCTCCGCCCTGACCTTGAGCGCACAGTTCCG ACGAGACTATCGGCCTCACCCTGCAGCTCCTTCATACACTTGTCAGCTTGCCTCAAGGGGCTCGCATTCTCGTCA ACTGCCAGGATCTGAGCCCCCTCACCGAGAATGCGCCATCGCATCCCCTCGTCCTAGACATCCTGGGCTTTGCAT GGCTCAATGGCATGGCGGACGCCGAGAATAGACTTGTGCTTTCACAAAAAATAGACGCAACCCTGAAAAGCCTCT CCTCCTCTTTCACCGGCACGGATGCCGTCATATTCCTTGAGTTTCTTGGAACTTTCCTGCGACAGGCGGATCCTG CTGTAGGTCGACGCACCCACATACAATTCGCTTTGTCTACAGCATGGCTAAGGCTGCCCAGGTATTGCCCAAAGA CCCCAAGTGGCTCAGTAAAGTATGCGGTTACATTCACAGTCTTGCCATGAGTCGACCGACTCCTGAAGCAAGGTC TGCCTACACGAATGCTGCCGCGTCTCTTGTCCAGATCTATCCAAATCAGGCCCCGAAGCTCCTATTCACGGATGA TCGTAGCGCAGACAAAGCTCCCGCCTATCTTCTCATGAATCTCCTACTCATCGATATCCGCTCATCCGCGCCGAC GCTTCTGGGCCAGCTCAACGCGCGAGACAGCGCTGCAACGACAAGACGATTGGCGTCGGCATTCGACGTCGTCTG CATCTTTGTGGGATTCCTGGCTCGATTTCTCGACGGTGACTGTCAAGATGACTTGGTCATGTCTCCGGACAGTCT CCTCAAGATTCGAAAGGGTATATCAGACACAATGTCGGTAACGATTGAGTATCTTCGAGATCGGTGGGATGCCTC GGTCGCCGGGGCCATGGGTTTGCATCCCGACGCCCGAGTTGGCAACGCCGAGACGGCAACCGGCTCACACCGAAC CTTGGCATGGGACTCGATTGCGAACTCGGCCGATGACGATCCGTTGGTACTGTCCGCTGTCCGCACGCTGGCGCT CTGGCTGAGGGAGGATGAAAACGAGCTGTTGCGCAAGGAGGCGACGGGATTAACGGACATGTTTATGGATCTCTA CCGGGGGAGCGCGCCGGGAAAGCTCGACTTCAGGTCGCCCATACTCGTTGCACTGGAGGCCTTGGTCGAACTGGA TAAGGGGCGGGACCTCCTCCTCCGCCATGATGGCTGGCAGATCCTTTGCAAAGATCTGACTGACATACTCAACGA CACATCAACCACCAACGACAAGGACGGGACCTCTCGCGGCATCGAAATCGTCCGTGTCCTCGTTCAGGTCGTGGA ACAGGAGTCAACCGGTACGGCAGAGGCGTGGATGGATCTGATTACCACCGTTGCCGCCTGGGACGTACCCGTTCA GGAGCGGCCGCTCGAGGCGAAAGAGTTTCAACTTGCGGTGTTGGAATTGTGTTGCGCGCTGCTGCTGGGGGCGAG CAACGGTATGCGAAACAGATATAGGCACTCGTTCAAAGCAGTCGCGGGTATCGCAACGCGGATGAGGCCCTTGAT GGCGTGTGATGGTCGCCTGAGCGGGCCGATGCAGGATGTCCTGGAGACCTTGAACGGCAACGTCTCGAAGAGCGA CTGA |