Protein ID | Ophio5|4036 |
Gene name | |
Location | scaffold_315:13724..15472 |
Strand | + |
Gene length (bp) | 1748 |
Transcript length (bp) | 1551 |
Coding sequence length (bp) | 1548 |
Protein length (aa) | 516 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 24 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 42 | 64 | 22 |
2 | 111 | 133 | 22 |
3 | 153 | 175 | 22 |
4 | 184 | 206 | 22 |
5 | 221 | 240 | 19 |
6 | 291 | 313 | 22 |
7 | 318 | 340 | 22 |
8 | 369 | 391 | 22 |
9 | 411 | 433 | 22 |
10 | 440 | 462 | 22 |
11 | 477 | 499 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 25.22 | 12.39 | 38.06 |
CcL | In ants, during behavior modification | 22.44 | 10.69 | 34.19 |
CcD | In ants, recently dead | 24.44 | 11.93 | 36.96 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.702848 | no |
SC16a | CcD | 0.920233 | no |
CcL | CcD | 0.778904 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|4036 MSALQGLEAATSIITRDLPIASANVSTPTSFQWRRDRYPVALSFNMAAFLLPALYSTLTKLWVAKMDSSMVVTTD VYTYMATIAEVINDGLPRASWTTIGDKHSRKRSQRLALTHTLLLAQAFLGLVLSLVLLGAAEAFARGFVPREVRQ QSITYVRIGSFSVFSGAIEAAIGAATRALDEPDVALVLSCIKFAVNIILDLLLISTLKVGSFEPTANLQAGIHLT CNLAATFGALAYFLIKNSDQHKGQERDQERDQERGRERVAPSLWALKVLLWPAIPTFAESAIRNSLYLWLVTTIV SMGTIYATAWGVFNTIRWGFVMVPVSALEATTLAFVGHNWSRWRSNIGITTLQPRPSLASLVRIARPAFVSAVLA LAFEVPLCISMYLVGARSFARYLSGSDDVAEVTAHMWRTLDWCYIVFAVSTQMSAILLATRPKWYLWQSLASTLL YVLPWTIVCQVAKLDRNSAWTYHALTFGGSLVFSFICIMAVLGLWAWTLRTGRAHLERVRLPPDSA |
Coding | >Ophio5|4036 ATGTCAGCGCTTCAGGGCCTTGAGGCTGCAACTTCCATCATCACAAGGGACCTCCCTATCGCCAGTGCCAACGTG AGCACCCCGACGTCGTTCCAATGGCGAAGGGACAGATACCCAGTGGCCCTATCCTTCAACATGGCTGCCTTTCTG CTTCCAGCCCTGTACAGTACCCTGACCAAGCTTTGGGTTGCCAAGATGGACTCCAGCATGGTCGTCACGACAGAC GTCTACACGTACATGGCCACCATCGCCGAGGTCATCAACGATGGTCTCCCCCGCGCTTCGTGGACCACGATTGGT GACAAGCACTCACGCAAACGCAGTCAACGTCTGGCCTTGACCCATACTCTCTTACTTGCCCAGGCCTTTCTAGGG CTCGTCCTTTCCCTCGTATTGCTCGGCGCCGCGGAGGCTTTCGCCAGGGGATTCGTGCCTCGCGAGGTGCGCCAG CAGAGCATCACTTACGTCCGTATCGGCAGCTTCTCCGTCTTCAGTGGTGCCATCGAGGCTGCCATTGGCGCTGCG ACGAGGGCCCTCGACGAACCCGACGTCGCCCTGGTCTTGAGTTGTATCAAGTTTGCCGTAAATATTATCCTCGAC TTGCTGCTGATCTCAACCTTGAAAGTTGGGAGCTTCGAGCCGACGGCGAATTTACAGGCAGGCATCCATCTGACC TGCAACCTCGCAGCCACTTTTGGCGCCCTTGCTTACTTTTTGATTAAAAATTCGGACCAGCACAAGGGCCAGGAA AGGGACCAGGAAAGGGACCAGGAAAGGGGCAGAGAGCGTGTGGCCCCCAGTCTCTGGGCCCTCAAGGTCCTCCTT TGGCCGGCCATTCCAACCTTTGCCGAGTCGGCCATACGGAACTCCTTGTATCTGTGGCTCGTCACCACCATCGTC TCCATGGGAACCATCTACGCCACGGCTTGGGGCGTCTTCAACACAATCCGCTGGGGCTTCGTCATGGTCCCCGTG TCCGCCTTGGAAGCCACGACCCTGGCCTTTGTAGGACACAATTGGAGCCGCTGGCGAAGCAATATTGGCATCACC ACGCTCCAGCCCCGGCCGAGTCTGGCGTCTTTGGTTCGAATCGCCCGTCCGGCATTCGTCTCCGCCGTCCTGGCC CTCGCCTTCGAAGTGCCGCTTTGCATTTCCATGTATCTTGTGGGTGCACGCTCCTTTGCGCGGTATCTAAGCGGC AGCGATGATGTGGCTGAAGTGACGGCCCATATGTGGAGAACGTTGGACTGGTGCTATATCGTCTTCGCCGTATCG ACGCAAATGAGTGCCATCTTACTCGCGACGCGACCAAAGTGGTATCTGTGGCAGAGCTTGGCCAGCACGCTTTTA TACGTCCTGCCTTGGACCATCGTCTGTCAGGTGGCCAAGCTGGATCGGAACAGTGCCTGGACGTACCACGCGCTG ACCTTTGGAGGGAGTCTGGTGTTTAGCTTCATCTGCATAATGGCTGTCCTAGGACTATGGGCGTGGACTTTGCGG ACGGGGAGGGCGCACTTGGAGCGGGTCAGACTCCCGCCCGACAGTGCT |
Transcript | >Ophio5|4036 ATGTCAGCGCTTCAGGGCCTTGAGGCTGCAACTTCCATCATCACAAGGGACCTCCCTATCGCCAGTGCCAACGTG AGCACCCCGACGTCGTTCCAATGGCGAAGGGACAGATACCCAGTGGCCCTATCCTTCAACATGGCTGCCTTTCTG CTTCCAGCCCTGTACAGTACCCTGACCAAGCTTTGGGTTGCCAAGATGGACTCCAGCATGGTCGTCACGACAGAC GTCTACACGTACATGGCCACCATCGCCGAGGTCATCAACGATGGTCTCCCCCGCGCTTCGTGGACCACGATTGGT GACAAGCACTCACGCAAACGCAGTCAACGTCTGGCCTTGACCCATACTCTCTTACTTGCCCAGGCCTTTCTAGGG CTCGTCCTTTCCCTCGTATTGCTCGGCGCCGCGGAGGCTTTCGCCAGGGGATTCGTGCCTCGCGAGGTGCGCCAG CAGAGCATCACTTACGTCCGTATCGGCAGCTTCTCCGTCTTCAGTGGTGCCATCGAGGCTGCCATTGGCGCTGCG ACGAGGGCCCTCGACGAACCCGACGTCGCCCTGGTCTTGAGTTGTATCAAGTTTGCCGTAAATATTATCCTCGAC TTGCTGCTGATCTCAACCTTGAAAGTTGGGAGCTTCGAGCCGACGGCGAATTTACAGGCAGGCATCCATCTGACC TGCAACCTCGCAGCCACTTTTGGCGCCCTTGCTTACTTTTTGATTAAAAATTCGGACCAGCACAAGGGCCAGGAA AGGGACCAGGAAAGGGACCAGGAAAGGGGCAGAGAGCGTGTGGCCCCCAGTCTCTGGGCCCTCAAGGTCCTCCTT TGGCCGGCCATTCCAACCTTTGCCGAGTCGGCCATACGGAACTCCTTGTATCTGTGGCTCGTCACCACCATCGTC TCCATGGGAACCATCTACGCCACGGCTTGGGGCGTCTTCAACACAATCCGCTGGGGCTTCGTCATGGTCCCCGTG TCCGCCTTGGAAGCCACGACCCTGGCCTTTGTAGGACACAATTGGAGCCGCTGGCGAAGCAATATTGGCATCACC ACGCTCCAGCCCCGGCCGAGTCTGGCGTCTTTGGTTCGAATCGCCCGTCCGGCATTCGTCTCCGCCGTCCTGGCC CTCGCCTTCGAAGTGCCGCTTTGCATTTCCATGTATCTTGTGGGTGCACGCTCCTTTGCGCGGTATCTAAGCGGC AGCGATGATGTGGCTGAAGTGACGGCCCATATGTGGAGAACGTTGGACTGGTGCTATATCGTCTTCGCCGTATCG ACGCAAATGAGTGCCATCTTACTCGCGACGCGACCAAAGTGGTATCTGTGGCAGAGCTTGGCCAGCACGCTTTTA TACGTCCTGCCTTGGACCATCGTCTGTCAGGTGGCCAAGCTGGATCGGAACAGTGCCTGGACGTACCACGCGCTG ACCTTTGGAGGGAGTCTGGTGTTTAGCTTCATCTGCATAATGGCTGTCCTAGGACTATGGGCGTGGACTTTGCGG ACGGGGAGGGCGCACTTGGAGCGGGTCAGACTCCCGCCCGACAGTGCTTGA |
Gene | >Ophio5|4036 ATGTCGTACAGGCCGGCAGCGGCCTCCTCTTGGCCAGAGGAGAGCGCTTCAGGGCCTTGAGGCTGCAACTTCCAT CATCACAAGGGTCGAATCCTCCCTTTCCCAGCCCTCGTTCCCCATGTATAGAGCGCCGTCGACTGAGAGGCAGGC GCAGGACCTCCCTATCGCCAGTGCCAACGTGAGCACCCCGACGTCGTTCCAATGGCGAAGGGACAGATACCCAGT GGCCCTATCCTTCAACATGGCTGCCTTTCTGCTTCCAGCCCTGTACAGTACCCTGACCAAGCTTTGGGTTGCCAA GATGGACTCCAGCATGGTCGTCACGACAGAGTCAGCAGCATTTTCATCTTGTACCTACTCACCAACAAATACCCG ACTCCCTTCGGCAACTGACATGCTCAATCCTCCCCCCCCCCTCCAGCGTCTACACGTACATGGCCACCATCGCCG AGGTCATCAACGATGGTCTCCCCCGCGCTTCGTGGACCACGATTGGTGACAAGCACTCACGCAAACGCAGTCAAC GTCTGGCCTTGACCCATACTCTCTTACTTGCCCAGGCCTTTCTAGGGCTCGTCCTTTCCCTCGTATTGCTCGGCG CCGCGGAGGCTTTCGCCAGGGGATTCGTGCCTCGCGAGGTGCGCCAGCAGAGCATCACTTACGTCCGTATCGGCA GCTTCTCCGTCTTCAGTGGTGCCATCGAGGCTGCCATTGGCGCTGCGACGAGGGCCCTCGACGAACCCGACGTCG CCCTGGTCTTGAGTTGTATCAAGTTTGCCGTAAATATTATCCTCGACTTGCTGCTGATCTCAACCTTGAAAGTTG GGAGCTTCGAGCCGACGGCGAATTTACAGGCAGGCATCCATCTGACCTGCAACCTCGCAGCCACTTTTGGCGCCC TTGCTTACTTTTTGATTAAAAATTCGGACCAGCACAAGGGCCAGGAAAGGGACCAGGAAAGGGACCAGGAAAGGG GCAGAGAGCGTGTGGCCCCCAGTCTCTGGGCCCTCAAGGTCCTCCTTTGGCCGGCCATTCCAACCTTTGCCGAGT CGGCCATACGGAACTCCTTGTATCTGTGGCTCGTCACCACCATCGTCTCCATGGGAACCATCTACGCCACGGCTT GGGGCGTCTTCAACACAATCCGCTGGGGCTTCGTCATGGTCCCCGTGTCCGCCTTGGAAGCCACGACCCTGGCCT TTGTAGGACACAATTGGAGCCGCTGGCGAAGCAATATTGGCATCACCACGCTCCAGCCCCGGCCGAGTCTGGCGT CTTTGGTTCGAATCGCCCGTCCGGCATTCGTCTCCGCCGTCCTGGCCCTCGCCTTCGAAGTGCCGCTTTGCATTT CCATGTATCTTGTGGGTGCACGCTCCTTTGCGCGGTATCTAAGCGGCAGCGATGATGTGGCTGAAGTGACGGCCC ATATGTGGAGAACGTTGGACTGGTGCTATATCGTCTTCGCCGTATCGACGCAAATGAGTGCCATCTTACTCGCGA CGCGACCAAAGTGGTATCTGTGGCAGAGCTTGGCCAGCACGCTTTTATACGTCCTGCCTTGGACCATCGTCTGTC AGGTGGCCAAGCTGGATCGGAACAGTGCCTGGACGTACCACGCGCTGACCTTTGGAGGGAGTCTGGTGTTTAGCT TCATCTGCATAATGGCTGTCCTAGGACTATGGGCGTGGACTTTGCGGACGGGGAGGGCGCACTTGGAGCGGGTCA GACTCCCGCCCGACAGTGCTTGA |