Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|403
Gene name
Locationscaffold_11:5506..6582
Strand+
Gene length (bp)1076
Transcript length (bp)966
Coding sequence length (bp)963
Protein length (aa) 321

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 36 0.5

Transmembrane Domains

Domain # Start End Length
1 12 34 22
2 44 63 19
3 110 129 19
4 166 188 22
5 223 245 22
6 260 279 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|403
MPACPVQGNADLYGLGIRIGLYIQMITVQLSGILSASFSVDDHIGQGTIVFVLSTVIILVRLINASIGNETSTGG
DDDPALEAVEIFPVLTLLLVQTGVCRVTSRNRLTMLVWVAELVGLAALYNYFWWRGMDLLPRSCQDDKAFFFARV
SIWGWYRSLNKAFGVLAAIGVALTLVTYCGSVIYEVVFCVVRFVLRRTNDGSSSSSSSSGTNSNTAGVKEKPGLT
LGSVDLLANVGAIVYVEVSLRWNSITGVHSLDSPGQFMPLVIALGQFLSVFYSAAKEMLRRRANDDFSGDEDEAA
AECHHHDQKTLPLAQAHTATT
Coding >Ophio5|403
ATGCCCGCCTGCCCTGTCCAAGGTAACGCCGACCTCTACGGCCTCGGCATCCGCATCGGCCTCTATATCCAAATG
ATCACCGTTCAGCTCTCCGGAATCCTCAGTGCTAGCTTCAGCGTCGACGACCACATCGGCCAAGGCACCATCGTC
TTTGTCCTCTCCACCGTCATCATCCTCGTCCGCCTCATCAATGCCAGCATCGGCAACGAGACCAGCACCGGCGGC
GACGACGATCCCGCCCTCGAGGCCGTCGAGATCTTTCCCGTCTTAACCCTTCTTCTGGTACAGACCGGCGTGTGT
CGCGTCACGTCCAGGAATCGTCTCACCATGCTCGTCTGGGTCGCCGAGCTCGTCGGACTGGCCGCCTTGTACAAC
TATTTCTGGTGGCGCGGCATGGACTTGCTGCCGCGGTCGTGCCAGGACGACAAGGCTTTTTTCTTCGCGCGTGTT
AGTATCTGGGGCTGGTATCGTAGCCTGAACAAGGCGTTTGGAGTACTTGCTGCCATCGGCGTTGCCTTGACGCTA
GTCACCTACTGCGGATCCGTCATATACGAGGTCGTCTTCTGCGTCGTCCGCTTCGTGCTGAGACGCACCAACGAC
GGCAGCAGCAGCAGCAGCAGCAGCAGCGGGACCAACAGCAACACCGCCGGGGTCAAGGAAAAGCCCGGCCTGACC
CTCGGCTCCGTCGACCTGCTGGCCAACGTCGGCGCCATCGTCTACGTCGAAGTCTCGCTGCGTTGGAACAGCATC
ACGGGTGTGCACTCGCTCGACAGCCCGGGCCAATTCATGCCCCTGGTCATCGCCCTGGGCCAGTTCCTGTCCGTC
TTCTACTCCGCCGCCAAGGAGATGCTCCGGCGACGCGCCAACGACGACTTCTCGGGAGACGAAGACGAGGCTGCG
GCCGAGTGTCACCACCACGATCAAAAGACGCTGCCTCTCGCCCAAGCACATACTGCCACGACA
Transcript >Ophio5|403
ATGCCCGCCTGCCCTGTCCAAGGTAACGCCGACCTCTACGGCCTCGGCATCCGCATCGGCCTCTATATCCAAATG
ATCACCGTTCAGCTCTCCGGAATCCTCAGTGCTAGCTTCAGCGTCGACGACCACATCGGCCAAGGCACCATCGTC
TTTGTCCTCTCCACCGTCATCATCCTCGTCCGCCTCATCAATGCCAGCATCGGCAACGAGACCAGCACCGGCGGC
GACGACGATCCCGCCCTCGAGGCCGTCGAGATCTTTCCCGTCTTAACCCTTCTTCTGGTACAGACCGGCGTGTGT
CGCGTCACGTCCAGGAATCGTCTCACCATGCTCGTCTGGGTCGCCGAGCTCGTCGGACTGGCCGCCTTGTACAAC
TATTTCTGGTGGCGCGGCATGGACTTGCTGCCGCGGTCGTGCCAGGACGACAAGGCTTTTTTCTTCGCGCGTGTT
AGTATCTGGGGCTGGTATCGTAGCCTGAACAAGGCGTTTGGAGTACTTGCTGCCATCGGCGTTGCCTTGACGCTA
GTCACCTACTGCGGATCCGTCATATACGAGGTCGTCTTCTGCGTCGTCCGCTTCGTGCTGAGACGCACCAACGAC
GGCAGCAGCAGCAGCAGCAGCAGCAGCGGGACCAACAGCAACACCGCCGGGGTCAAGGAAAAGCCCGGCCTGACC
CTCGGCTCCGTCGACCTGCTGGCCAACGTCGGCGCCATCGTCTACGTCGAAGTCTCGCTGCGTTGGAACAGCATC
ACGGGTGTGCACTCGCTCGACAGCCCGGGCCAATTCATGCCCCTGGTCATCGCCCTGGGCCAGTTCCTGTCCGTC
TTCTACTCCGCCGCCAAGGAGATGCTCCGGCGACGCGCCAACGACGACTTCTCGGGAGACGAAGACGAGGCTGCG
GCCGAGTGTCACCACCACGATCAAAAGACGCTGCCTCTCGCCCAAGCACATACTGCCACGACATGA
Gene >Ophio5|403
ATGCCCGCCTGCCCTGTCCAAGGTAACGCCGACCTCTACGGCCTCGGCATCCGCATCGGCCTCTATATCCAAATG
ATCACCGTTCAGCTCTCCGGAATCCTCAGTGCTAGCTTCAGCGTCGACGACCACATCGGCCAAGGCACCATCGTC
TTTGTCCTCTCCACCGTCATCATCCTCGTCCGCCTCATCAATGCCAGCATCGGCAACGAGACCAGCACCGGCGGC
GACGACGATCCCGCCCTCGAGGCCGTCGAGATCTTTCCCGTCTTAACCCTTCTTCTGGTACAGACCGGCGTGTGT
CGCGTCACGTCCAGGAATCGTCTCACCATGCTCGTCTGGGTCGCCGAGCTCGTCGGACTGGCCGCCTTGTACAAC
TATTTCTGGTGGCGCGGCATGGACTTGCTGCCGCGGTCGTGCCAGGACGACAAGGCTTTTTTCTTCGCGCGTGTT
AGTATCTGGGGCTGGTATCGTAGCCTGAACAAGGCGTTTGGAGTACTTGCTGCCATCGGCGTTGCCTTGACGCTA
GTCACCTACTGCGGATGTGAGTTGTTGGTCAGAAAAGGGGGGCGGAATCCGTCTGACCAAACCGTCTAGCCGTCA
TATACGAGGTCGTCTTCTGCGTCGTCCGCTTCGTGCTGAGACGCACCAACGACGGCAGCAGCAGCAGCAGCAGCA
GCAGCGGGACCAACAGCAACACCGCCGGGGTCAAGGAAAAGCCCGGCCTGACCCTCGGCTCCGTCGACCTGCTGG
CCAACGTCGGCGCCATCGTCTACGTCGAAGTCTCGCTGCGTTGGAACAGCATCACGGGTGTGCACTCGCTCGACA
GCCCGGGCCAATTCATGCCCCTGGTCATCGCCCTGGGCCAGTTCCTGTCCGTCTTCTACTCCGCCGCCAAGGAGA
TGCTCCGGCGACGCGCCAACGACGACTTCTCGGGAGACGAAGACGGTGAGGATGCCGGAACTGTATCCCGTCTCC
TTGTCGCCTTTGCTGACGATGATATAGAGGCTGCGGCCGAGTGTCACCACCACGATCAAAAGACGCTGCCTCTCG
CCCAAGCACATACTGCCACGACATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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