Protein ID | Ophio5|4029 |
Gene name | |
Location | scaffold_314:21363..23334 |
Strand | + |
Gene length (bp) | 1971 |
Transcript length (bp) | 1971 |
Coding sequence length (bp) | 1968 |
Protein length (aa) | 656 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13402 | Peptidase_M60 | Peptidase M60, enhancin and enhancin-like | 9.1E-50 | 327 | 589 |
PF17291 | M60-like_N | N-terminal domain of M60-like peptidases | 9.2E-10 | 213 | 309 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|A5PJN5|TCAF1_BOVIN | TRPM8 channel-associated factor 1 OS=Bos taurus GN=TCAF1 PE=2 SV=1 | 291 | 609 | 7.0E-08 |
sp|Q921K8|TCAF2_MOUSE | TRPM8 channel-associated factor 2 OS=Mus musculus GN=Tcaf2 PE=1 SV=1 | 291 | 589 | 1.0E-07 |
sp|Q9Y4C2|TCAF1_HUMAN | TRPM8 channel-associated factor 1 OS=Homo sapiens GN=TCAF1 PE=1 SV=3 | 291 | 589 | 8.0E-07 |
sp|Q5R8R3|TCAF1_PONAB | TRPM8 channel-associated factor 1 OS=Pongo abelii GN=TCAF1 PE=2 SV=2 | 291 | 589 | 9.0E-07 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 26 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|4029 MVYFRLGLLAPCSILAFGIIGNKHAHDDTLGEAENFKRDVELQRLSDPDTSGDALAALQLYQQAQSFYPQQEQSV SIKVVNKGSAENLWFSLESPILANLNLNITEMGPGCSQTTAGSKRIRCEWLSVHQSEEKQVHMVLKYHGPFHVRK VEVPLTLTAYLDGPNWDQVDTAFRLVRSLRWEVRRPQLYRYIVDNDKHFPQPRAMNITAVPRSKDEMIRLRQWFQ WTDFYPTGFYLRPRMPLQLIVLGGSAQGPLPELLIGTPALVNPWNRADNFLPGQQRSKLLRYGVNTVTCPVGGIM YIRYAYELGSRPPPDITVVLYEGTAAQPFPLFRQGITTDKEWKTMLAATTVPFAELAGRRVIVTGLAADARKYAS MGQRQGELLDTYDKIITAQDRISGLFRHGAAGKHRPSPLRPMVVQTSNGLNANAWHFRAALPAMCHGDVWWQPEV ENSWLLWHELGHQRQHVHTWSWQEAEEVTVNIYSLAVRRLRPDRRMGHGSAREWAVAKDFLAEWERNQTVDFDHA DHFVQLAMFDQLRQVFGDTFYHELHIMSRESTTRRSSEEKKHYFMTRASWIVQEDLSEYFEKWGMQPGRATLQWL QGLPKPEWDYTSTPAYTALEEWRKAKWRKVRGRGRREDKGNNTAEMKDVGISFVED |
Coding | >Ophio5|4029 ATGGTTTATTTCCGACTCGGCCTGCTTGCCCCATGCAGCATCCTGGCTTTCGGTATCATCGGGAACAAGCACGCC CACGACGATACTTTGGGCGAGGCGGAGAATTTCAAGAGAGACGTAGAGCTCCAGAGGTTGAGTGACCCGGATACT TCTGGCGATGCGTTGGCGGCGCTGCAACTCTATCAGCAAGCTCAGTCTTTCTACCCACAGCAGGAACAATCCGTT TCGATCAAAGTTGTCAACAAGGGCTCCGCCGAGAATCTTTGGTTCAGTCTTGAGTCGCCCATACTGGCCAACTTG AACCTCAACATCACCGAGATGGGTCCTGGTTGCTCGCAGACAACTGCAGGTTCCAAGCGGATTCGTTGCGAGTGG CTTTCTGTGCACCAGTCTGAGGAGAAGCAGGTCCACATGGTGTTGAAATATCACGGTCCCTTCCACGTTAGAAAA GTTGAAGTGCCGCTTACACTGACGGCATACTTGGACGGTCCAAATTGGGACCAAGTCGATACAGCATTCCGGCTC GTTCGATCACTTCGCTGGGAGGTACGCCGTCCGCAATTGTATAGATACATCGTCGACAACGACAAACATTTCCCG CAGCCACGGGCCATGAACATCACGGCGGTCCCTCGGTCGAAAGACGAGATGATTCGGCTACGACAATGGTTTCAA TGGACCGACTTCTACCCAACGGGGTTTTACCTAAGGCCCAGGATGCCGCTTCAACTCATTGTTCTCGGAGGATCA GCCCAAGGCCCGCTGCCCGAGCTTCTCATTGGCACACCAGCCCTGGTGAATCCGTGGAACCGGGCCGACAATTTC TTACCGGGCCAGCAGCGCAGTAAGCTGTTGCGTTACGGAGTCAACACGGTGACGTGCCCCGTCGGCGGTATCATG TACATTCGGTATGCGTACGAGTTGGGCTCACGTCCACCTCCCGACATCACGGTCGTCTTATACGAGGGAACAGCG GCGCAACCTTTCCCGCTGTTTCGGCAGGGCATAACGACGGATAAGGAATGGAAGACGATGCTGGCCGCCACCACG GTTCCTTTCGCCGAGCTCGCTGGCCGGCGAGTCATCGTCACCGGTCTAGCTGCAGATGCGAGGAAGTATGCCTCG ATGGGGCAACGGCAGGGCGAATTGCTCGACACATACGACAAAATCATCACGGCCCAAGACAGAATCAGCGGTCTC TTTCGACATGGGGCAGCAGGCAAACATCGACCCAGCCCGTTGCGGCCGATGGTGGTGCAAACGTCCAACGGGTTG AATGCCAACGCGTGGCACTTCCGCGCCGCGTTGCCGGCCATGTGTCACGGAGACGTCTGGTGGCAGCCAGAAGTA GAGAATTCATGGCTGCTGTGGCACGAGCTGGGTCATCAGCGGCAACACGTCCACACATGGAGTTGGCAGGAAGCG GAGGAAGTCACCGTCAACATCTACTCTCTCGCCGTCCGGCGCTTACGGCCGGATAGACGGATGGGACACGGCTCA GCCAGGGAGTGGGCCGTTGCCAAGGACTTTCTCGCCGAATGGGAGAGGAATCAGACAGTGGATTTCGACCATGCC GACCATTTCGTGCAGCTCGCCATGTTCGACCAGCTCCGCCAGGTTTTCGGCGACACCTTCTACCACGAGCTTCAC ATCATGTCTCGCGAATCGACGACCCGGCGTAGCTCGGAGGAAAAGAAGCACTACTTCATGACGCGAGCTTCGTGG ATCGTGCAGGAAGACCTCAGCGAATACTTTGAGAAATGGGGTATGCAGCCGGGACGGGCCACCTTGCAATGGCTT CAGGGGCTGCCCAAGCCGGAATGGGACTACACCTCGACGCCTGCATACACGGCGCTGGAAGAATGGAGGAAGGCG AAGTGGCGAAAGGTAAGGGGACGAGGGAGGAGAGAAGATAAAGGAAATAATACTGCCGAGATGAAGGACGTCGGA ATAAGTTTTGTTGAAGAT |
Transcript | >Ophio5|4029 ATGGTTTATTTCCGACTCGGCCTGCTTGCCCCATGCAGCATCCTGGCTTTCGGTATCATCGGGAACAAGCACGCC CACGACGATACTTTGGGCGAGGCGGAGAATTTCAAGAGAGACGTAGAGCTCCAGAGGTTGAGTGACCCGGATACT TCTGGCGATGCGTTGGCGGCGCTGCAACTCTATCAGCAAGCTCAGTCTTTCTACCCACAGCAGGAACAATCCGTT TCGATCAAAGTTGTCAACAAGGGCTCCGCCGAGAATCTTTGGTTCAGTCTTGAGTCGCCCATACTGGCCAACTTG AACCTCAACATCACCGAGATGGGTCCTGGTTGCTCGCAGACAACTGCAGGTTCCAAGCGGATTCGTTGCGAGTGG CTTTCTGTGCACCAGTCTGAGGAGAAGCAGGTCCACATGGTGTTGAAATATCACGGTCCCTTCCACGTTAGAAAA GTTGAAGTGCCGCTTACACTGACGGCATACTTGGACGGTCCAAATTGGGACCAAGTCGATACAGCATTCCGGCTC GTTCGATCACTTCGCTGGGAGGTACGCCGTCCGCAATTGTATAGATACATCGTCGACAACGACAAACATTTCCCG CAGCCACGGGCCATGAACATCACGGCGGTCCCTCGGTCGAAAGACGAGATGATTCGGCTACGACAATGGTTTCAA TGGACCGACTTCTACCCAACGGGGTTTTACCTAAGGCCCAGGATGCCGCTTCAACTCATTGTTCTCGGAGGATCA GCCCAAGGCCCGCTGCCCGAGCTTCTCATTGGCACACCAGCCCTGGTGAATCCGTGGAACCGGGCCGACAATTTC TTACCGGGCCAGCAGCGCAGTAAGCTGTTGCGTTACGGAGTCAACACGGTGACGTGCCCCGTCGGCGGTATCATG TACATTCGGTATGCGTACGAGTTGGGCTCACGTCCACCTCCCGACATCACGGTCGTCTTATACGAGGGAACAGCG GCGCAACCTTTCCCGCTGTTTCGGCAGGGCATAACGACGGATAAGGAATGGAAGACGATGCTGGCCGCCACCACG GTTCCTTTCGCCGAGCTCGCTGGCCGGCGAGTCATCGTCACCGGTCTAGCTGCAGATGCGAGGAAGTATGCCTCG ATGGGGCAACGGCAGGGCGAATTGCTCGACACATACGACAAAATCATCACGGCCCAAGACAGAATCAGCGGTCTC TTTCGACATGGGGCAGCAGGCAAACATCGACCCAGCCCGTTGCGGCCGATGGTGGTGCAAACGTCCAACGGGTTG AATGCCAACGCGTGGCACTTCCGCGCCGCGTTGCCGGCCATGTGTCACGGAGACGTCTGGTGGCAGCCAGAAGTA GAGAATTCATGGCTGCTGTGGCACGAGCTGGGTCATCAGCGGCAACACGTCCACACATGGAGTTGGCAGGAAGCG GAGGAAGTCACCGTCAACATCTACTCTCTCGCCGTCCGGCGCTTACGGCCGGATAGACGGATGGGACACGGCTCA GCCAGGGAGTGGGCCGTTGCCAAGGACTTTCTCGCCGAATGGGAGAGGAATCAGACAGTGGATTTCGACCATGCC GACCATTTCGTGCAGCTCGCCATGTTCGACCAGCTCCGCCAGGTTTTCGGCGACACCTTCTACCACGAGCTTCAC ATCATGTCTCGCGAATCGACGACCCGGCGTAGCTCGGAGGAAAAGAAGCACTACTTCATGACGCGAGCTTCGTGG ATCGTGCAGGAAGACCTCAGCGAATACTTTGAGAAATGGGGTATGCAGCCGGGACGGGCCACCTTGCAATGGCTT CAGGGGCTGCCCAAGCCGGAATGGGACTACACCTCGACGCCTGCATACACGGCGCTGGAAGAATGGAGGAAGGCG AAGTGGCGAAAGGTAAGGGGACGAGGGAGGAGAGAAGATAAAGGAAATAATACTGCCGAGATGAAGGACGTCGGA ATAAGTTTTGTTGAAGATTGA |
Gene | >Ophio5|4029 ATGGTTTATTTCCGACTCGGCCTGCTTGCCCCATGCAGCATCCTGGCTTTCGGTATCATCGGGAACAAGCACGCC CACGACGATACTTTGGGCGAGGCGGAGAATTTCAAGAGAGACGTAGAGCTCCAGAGGTTGAGTGACCCGGATACT TCTGGCGATGCGTTGGCGGCGCTGCAACTCTATCAGCAAGCTCAGTCTTTCTACCCACAGCAGGAACAATCCGTT TCGATCAAAGTTGTCAACAAGGGCTCCGCCGAGAATCTTTGGTTCAGTCTTGAGTCGCCCATACTGGCCAACTTG AACCTCAACATCACCGAGATGGGTCCTGGTTGCTCGCAGACAACTGCAGGTTCCAAGCGGATTCGTTGCGAGTGG CTTTCTGTGCACCAGTCTGAGGAGAAGCAGGTCCACATGGTGTTGAAATATCACGGTCCCTTCCACGTTAGAAAA GTTGAAGTGCCGCTTACACTGACGGCATACTTGGACGGTCCAAATTGGGACCAAGTCGATACAGCATTCCGGCTC GTTCGATCACTTCGCTGGGAGGTACGCCGTCCGCAATTGTATAGATACATCGTCGACAACGACAAACATTTCCCG CAGCCACGGGCCATGAACATCACGGCGGTCCCTCGGTCGAAAGACGAGATGATTCGGCTACGACAATGGTTTCAA TGGACCGACTTCTACCCAACGGGGTTTTACCTAAGGCCCAGGATGCCGCTTCAACTCATTGTTCTCGGAGGATCA GCCCAAGGCCCGCTGCCCGAGCTTCTCATTGGCACACCAGCCCTGGTGAATCCGTGGAACCGGGCCGACAATTTC TTACCGGGCCAGCAGCGCAGTAAGCTGTTGCGTTACGGAGTCAACACGGTGACGTGCCCCGTCGGCGGTATCATG TACATTCGGTATGCGTACGAGTTGGGCTCACGTCCACCTCCCGACATCACGGTCGTCTTATACGAGGGAACAGCG GCGCAACCTTTCCCGCTGTTTCGGCAGGGCATAACGACGGATAAGGAATGGAAGACGATGCTGGCCGCCACCACG GTTCCTTTCGCCGAGCTCGCTGGCCGGCGAGTCATCGTCACCGGTCTAGCTGCAGATGCGAGGAAGTATGCCTCG ATGGGGCAACGGCAGGGCGAATTGCTCGACACATACGACAAAATCATCACGGCCCAAGACAGAATCAGCGGTCTC TTTCGACATGGGGCAGCAGGCAAACATCGACCCAGCCCGTTGCGGCCGATGGTGGTGCAAACGTCCAACGGGTTG AATGCCAACGCGTGGCACTTCCGCGCCGCGTTGCCGGCCATGTGTCACGGAGACGTCTGGTGGCAGCCAGAAGTA GAGAATTCATGGCTGCTGTGGCACGAGCTGGGTCATCAGCGGCAACACGTCCACACATGGAGTTGGCAGGAAGCG GAGGAAGTCACCGTCAACATCTACTCTCTCGCCGTCCGGCGCTTACGGCCGGATAGACGGATGGGACACGGCTCA GCCAGGGAGTGGGCCGTTGCCAAGGACTTTCTCGCCGAATGGGAGAGGAATCAGACAGTGGATTTCGACCATGCC GACCATTTCGTGCAGCTCGCCATGTTCGACCAGCTCCGCCAGGTTTTCGGCGACACCTTCTACCACGAGCTTCAC ATCATGTCTCGCGAATCGACGACCCGGCGTAGCTCGGAGGAAAAGAAGCACTACTTCATGACGCGAGCTTCGTGG ATCGTGCAGGAAGACCTCAGCGAATACTTTGAGAAATGGGGTATGCAGCCGGGACGGGCCACCTTGCAATGGCTT CAGGGGCTGCCCAAGCCGGAATGGGACTACACCTCGACGCCTGCATACACGGCGCTGGAAGAATGGAGGAAGGCG AAGTGGCGAAAGGTAAGGGGACGAGGGAGGAGAGAAGATAAAGGAAATAATACTGCCGAGATGAAGGACGTCGGA ATAAGTTTTGTTGAAGATTGA |