Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3974
Gene name
Locationscaffold_31:33424..34572
Strand+
Gene length (bp)1148
Transcript length (bp)1092
Coding sequence length (bp)1089
Protein length (aa) 363

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.5

Transmembrane Domains

Domain # Start End Length
1 32 54 22
2 142 164 22
3 251 273 22
4 333 355 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3974
MALAMDLTLSLHKRALAAASDGLADYRLPRWTWLVLLLQLIVLVPILLILSYTLETVYPIFAMIEDDEPPSYRPV
SLDSSSEDDFPLRLRPKPVSGPSRPASTSSLRDINRLLMANGGVMANFRGFSCALAQAFATSLLMAVFAAALGGL
FAPVATLLASLALVQLSAGWVHIVISRPSPLPFWQRLPPFKRTFEATWRPVTIVWFACEVSRWLPLALISITGLT
LPELQIAGHRQADVHQLNGVFVIKAIALLLVTLVFSVFLVIPANVVLVRVQASLLPAHEDTTVSFDRSFHGRVEP
AVVGGRGYVSMSDAWATFTKAAWRRLLTLYVKVFFVFVAGVLLVTSLLLPVAVVIAKNSVPVD
Coding >Ophio5|3974
ATGGCCCTCGCCATGGACCTGACCCTTTCTCTTCACAAGAGAGCTCTCGCCGCCGCAAGCGATGGTCTGGCAGAT
TACAGGCTTCCGCGATGGACCTGGCTCGTTCTCCTCCTTCAGCTCATTGTCCTCGTCCCCATCCTCCTCATCCTC
AGCTACACGCTCGAAACAGTCTACCCCATCTTCGCCATGATTGAAGATGACGAGCCCCCATCCTACCGTCCCGTC
TCTCTCGATTCCTCATCCGAAGATGACTTTCCACTTCGTCTCCGACCCAAGCCCGTCAGCGGCCCTTCTCGTCCA
GCCTCGACCTCGTCTCTTCGCGATATCAACCGCCTGCTCATGGCCAATGGCGGCGTCATGGCCAACTTCCGTGGC
TTCTCATGCGCCCTCGCCCAGGCCTTTGCCACCTCGCTCCTCATGGCCGTCTTCGCCGCCGCTCTGGGAGGCCTC
TTCGCCCCCGTCGCTACCCTGCTTGCGTCGCTGGCCCTCGTCCAACTCAGCGCCGGCTGGGTCCACATCGTCATT
TCGCGCCCCTCGCCGCTACCTTTCTGGCAGCGTCTGCCCCCTTTCAAGCGCACCTTTGAAGCTACTTGGCGACCC
GTCACCATTGTCTGGTTCGCCTGCGAAGTCTCCCGCTGGCTTCCCCTCGCCCTCATCAGCATCACCGGACTCACC
CTCCCCGAACTGCAGATCGCCGGACACCGCCAGGCCGACGTCCACCAGCTCAACGGCGTCTTCGTCATCAAGGCC
ATCGCCCTCCTGCTCGTCACTCTCGTCTTCTCCGTCTTTCTCGTCATCCCCGCAAACGTCGTCCTCGTCCGCGTC
CAGGCCTCGCTGCTCCCCGCTCACGAGGACACCACCGTATCCTTTGATCGCTCGTTTCACGGCCGCGTCGAGCCC
GCCGTCGTCGGTGGCCGCGGCTACGTTTCCATGTCCGATGCCTGGGCCACCTTCACCAAAGCCGCTTGGCGCCGT
CTCCTCACTCTCTACGTCAAGGTCTTCTTCGTCTTTGTCGCCGGCGTCCTCCTCGTCACCAGCCTGCTCTTACCC
GTCGCCGTCGTCATCGCCAAAAACTCGGTCCCCGTCGAC
Transcript >Ophio5|3974
ATGGCCCTCGCCATGGACCTGACCCTTTCTCTTCACAAGAGAGCTCTCGCCGCCGCAAGCGATGGTCTGGCAGAT
TACAGGCTTCCGCGATGGACCTGGCTCGTTCTCCTCCTTCAGCTCATTGTCCTCGTCCCCATCCTCCTCATCCTC
AGCTACACGCTCGAAACAGTCTACCCCATCTTCGCCATGATTGAAGATGACGAGCCCCCATCCTACCGTCCCGTC
TCTCTCGATTCCTCATCCGAAGATGACTTTCCACTTCGTCTCCGACCCAAGCCCGTCAGCGGCCCTTCTCGTCCA
GCCTCGACCTCGTCTCTTCGCGATATCAACCGCCTGCTCATGGCCAATGGCGGCGTCATGGCCAACTTCCGTGGC
TTCTCATGCGCCCTCGCCCAGGCCTTTGCCACCTCGCTCCTCATGGCCGTCTTCGCCGCCGCTCTGGGAGGCCTC
TTCGCCCCCGTCGCTACCCTGCTTGCGTCGCTGGCCCTCGTCCAACTCAGCGCCGGCTGGGTCCACATCGTCATT
TCGCGCCCCTCGCCGCTACCTTTCTGGCAGCGTCTGCCCCCTTTCAAGCGCACCTTTGAAGCTACTTGGCGACCC
GTCACCATTGTCTGGTTCGCCTGCGAAGTCTCCCGCTGGCTTCCCCTCGCCCTCATCAGCATCACCGGACTCACC
CTCCCCGAACTGCAGATCGCCGGACACCGCCAGGCCGACGTCCACCAGCTCAACGGCGTCTTCGTCATCAAGGCC
ATCGCCCTCCTGCTCGTCACTCTCGTCTTCTCCGTCTTTCTCGTCATCCCCGCAAACGTCGTCCTCGTCCGCGTC
CAGGCCTCGCTGCTCCCCGCTCACGAGGACACCACCGTATCCTTTGATCGCTCGTTTCACGGCCGCGTCGAGCCC
GCCGTCGTCGGTGGCCGCGGCTACGTTTCCATGTCCGATGCCTGGGCCACCTTCACCAAAGCCGCTTGGCGCCGT
CTCCTCACTCTCTACGTCAAGGTCTTCTTCGTCTTTGTCGCCGGCGTCCTCCTCGTCACCAGCCTGCTCTTACCC
GTCGCCGTCGTCATCGCCAAAAACTCGGTCCCCGTCGACTGA
Gene >Ophio5|3974
ATGGCCCTCGCCATGGACCTGACCCTTTCTCTTCACAAGAGAGCTCTCGCCGCCGCAAGCGATGGTCTGGCAGAT
TACAGGCTTCCGCGATGGACCTGGCTCGTTCTCCTCCTTCAGCTCATTGTCCTCGTCCCCATCCTCCTCATCGTG
AGTCACACCCTTTCCTTGAGTTTTGAGCATCCACCTACTGAACGCGCCTCCAGCTCAGCTACACGCTCGAAACAG
TCTACCCCATCTTCGCCATGATTGAAGATGACGAGCCCCCATCCTACCGTCCCGTCTCTCTCGATTCCTCATCCG
AAGATGACTTTCCACTTCGTCTCCGACCCAAGCCCGTCAGCGGCCCTTCTCGTCCAGCCTCGACCTCGTCTCTTC
GCGATATCAACCGCCTGCTCATGGCCAATGGCGGCGTCATGGCCAACTTCCGTGGCTTCTCATGCGCCCTCGCCC
AGGCCTTTGCCACCTCGCTCCTCATGGCCGTCTTCGCCGCCGCTCTGGGAGGCCTCTTCGCCCCCGTCGCTACCC
TGCTTGCGTCGCTGGCCCTCGTCCAACTCAGCGCCGGCTGGGTCCACATCGTCATTTCGCGCCCCTCGCCGCTAC
CTTTCTGGCAGCGTCTGCCCCCTTTCAAGCGCACCTTTGAAGCTACTTGGCGACCCGTCACCATTGTCTGGTTCG
CCTGCGAAGTCTCCCGCTGGCTTCCCCTCGCCCTCATCAGCATCACCGGACTCACCCTCCCCGAACTGCAGATCG
CCGGACACCGCCAGGCCGACGTCCACCAGCTCAACGGCGTCTTCGTCATCAAGGCCATCGCCCTCCTGCTCGTCA
CTCTCGTCTTCTCCGTCTTTCTCGTCATCCCCGCAAACGTCGTCCTCGTCCGCGTCCAGGCCTCGCTGCTCCCCG
CTCACGAGGACACCACCGTATCCTTTGATCGCTCGTTTCACGGCCGCGTCGAGCCCGCCGTCGTCGGTGGCCGCG
GCTACGTTTCCATGTCCGATGCCTGGGCCACCTTCACCAAAGCCGCTTGGCGCCGTCTCCTCACTCTCTACGTCA
AGGTCTTCTTCGTCTTTGTCGCCGGCGTCCTCCTCGTCACCAGCCTGCTCTTACCCGTCGCCGTCGTCATCGCCA
AAAACTCGGTCCCCGTCGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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