Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3938
Gene name
Locationscaffold_308:66..1119
Strand-
Gene length (bp)1053
Transcript length (bp)1053
Coding sequence length (bp)1050
Protein length (aa) 350

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.45

Transmembrane Domains

Domain # Start End Length
1 317 339 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3938
MAPDRPTSVKLAAGTELVVVIPPETVQDEEEEEEEEGEGAAVVAAVVFHPGTSEGAEEEEEEEEAPVGVGVGAGA
VGAGVVRAEPGGPPALLRPSSALLLLLLLLLLPLRLSDVAIGSRLTVQVGSEVDAVKLELLVAVDESWLLGVVEP
DLDGSFPPELEAPPVEYEDEIEPDEPVDAVGCCQLDDAPVDAVGSQLDAARVDTVESQLDDTAPDDRDDDDDDDD
GEWEDVLGSVEPQLETPVDVDDDASDDQVEAKPDVQLDVPAEDVADGLPEPLPADVGDPTALVSDVYVPEPDSDP
DRETVGATDHESVPVSVMVMVPSSVGVVVVVAVVVVLLSSSGTHVSVTTH
Coding >Ophio5|3938
ATGGCGCCGGACCGTCCCACGTCGGTGAAGTTGGCGGCTGGTACCGAGCTGGTGGTTGTCATTCCGCCGGAGACG
GTCCAAGATGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGGCGCGGCTGTCGTCGCCGCCGTCGTGTTCCATCCT
GGGACCTCGGAAGGGGCCGAAGAAGAAGAGGAGGAGGAGGAGGCGCCGGTCGGAGTCGGAGTCGGAGCCGGAGCC
GTCGGAGCCGGAGTCGTACGTGCCGAGCCGGGAGGGCCGCCGGCGCTCCTTCGGCCGTCCTCTGCGCTACTACTA
CTGCTACTACTACTACTACTACCGCTACGACTTTCCGACGTCGCGATCGGGTCTAGACTGACGGTCCAGGTCGGG
TCCGAGGTGGATGCTGTCAAGTTGGAGCTTCTCGTTGCCGTCGACGAGTCCTGGCTGCTAGGTGTTGTTGAGCCG
GACCTTGACGGGTCATTCCCACCCGAGCTTGAAGCGCCCCCGGTCGAGTACGAGGACGAGATTGAGCCTGACGAG
CCGGTCGATGCGGTTGGGTGCTGCCAGCTTGATGATGCTCCGGTTGATGCCGTCGGGTCCCAGCTTGATGCTGCT
CGAGTCGATACCGTCGAATCCCAGCTTGATGATACTGCTCCAGACGACAGGGACGATGATGATGATGATGATGAT
GGTGAGTGGGAAGACGTGCTCGGATCCGTCGAGCCCCAACTCGAGACTCCCGTCGACGTCGACGACGACGCTTCC
GACGACCAAGTCGAAGCCAAACCCGACGTCCAACTCGACGTGCCAGCCGAAGACGTAGCCGACGGGCTACCAGAA
CCGTTGCCGGCCGACGTCGGCGATCCCACGGCCCTCGTCTCCGACGTATACGTCCCAGAGCCGGACTCGGACCCG
GACCGGGAAACAGTCGGCGCCACCGACCACGAGTCCGTGCCCGTCTCGGTAATGGTCATGGTTCCGTCTTCGGTT
GGAGTCGTAGTCGTAGTCGCAGTCGTAGTCGTACTGCTGTCATCATCAGGCACGCACGTCTCCGTCACGACACAC
Transcript >Ophio5|3938
ATGGCGCCGGACCGTCCCACGTCGGTGAAGTTGGCGGCTGGTACCGAGCTGGTGGTTGTCATTCCGCCGGAGACG
GTCCAAGATGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGGCGCGGCTGTCGTCGCCGCCGTCGTGTTCCATCCT
GGGACCTCGGAAGGGGCCGAAGAAGAAGAGGAGGAGGAGGAGGCGCCGGTCGGAGTCGGAGTCGGAGCCGGAGCC
GTCGGAGCCGGAGTCGTACGTGCCGAGCCGGGAGGGCCGCCGGCGCTCCTTCGGCCGTCCTCTGCGCTACTACTA
CTGCTACTACTACTACTACTACCGCTACGACTTTCCGACGTCGCGATCGGGTCTAGACTGACGGTCCAGGTCGGG
TCCGAGGTGGATGCTGTCAAGTTGGAGCTTCTCGTTGCCGTCGACGAGTCCTGGCTGCTAGGTGTTGTTGAGCCG
GACCTTGACGGGTCATTCCCACCCGAGCTTGAAGCGCCCCCGGTCGAGTACGAGGACGAGATTGAGCCTGACGAG
CCGGTCGATGCGGTTGGGTGCTGCCAGCTTGATGATGCTCCGGTTGATGCCGTCGGGTCCCAGCTTGATGCTGCT
CGAGTCGATACCGTCGAATCCCAGCTTGATGATACTGCTCCAGACGACAGGGACGATGATGATGATGATGATGAT
GGTGAGTGGGAAGACGTGCTCGGATCCGTCGAGCCCCAACTCGAGACTCCCGTCGACGTCGACGACGACGCTTCC
GACGACCAAGTCGAAGCCAAACCCGACGTCCAACTCGACGTGCCAGCCGAAGACGTAGCCGACGGGCTACCAGAA
CCGTTGCCGGCCGACGTCGGCGATCCCACGGCCCTCGTCTCCGACGTATACGTCCCAGAGCCGGACTCGGACCCG
GACCGGGAAACAGTCGGCGCCACCGACCACGAGTCCGTGCCCGTCTCGGTAATGGTCATGGTTCCGTCTTCGGTT
GGAGTCGTAGTCGTAGTCGCAGTCGTAGTCGTACTGCTGTCATCATCAGGCACGCACGTCTCCGTCACGACACAC
TGA
Gene >Ophio5|3938
ATGGCGCCGGACCGTCCCACGTCGGTGAAGTTGGCGGCTGGTACCGAGCTGGTGGTTGTCATTCCGCCGGAGACG
GTCCAAGATGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGGCGCGGCTGTCGTCGCCGCCGTCGTGTTCCATCCT
GGGACCTCGGAAGGGGCCGAAGAAGAAGAGGAGGAGGAGGAGGCGCCGGTCGGAGTCGGAGTCGGAGCCGGAGCC
GTCGGAGCCGGAGTCGTACGTGCCGAGCCGGGAGGGCCGCCGGCGCTCCTTCGGCCGTCCTCTGCGCTACTACTA
CTGCTACTACTACTACTACTACCGCTACGACTTTCCGACGTCGCGATCGGGTCTAGACTGACGGTCCAGGTCGGG
TCCGAGGTGGATGCTGTCAAGTTGGAGCTTCTCGTTGCCGTCGACGAGTCCTGGCTGCTAGGTGTTGTTGAGCCG
GACCTTGACGGGTCATTCCCACCCGAGCTTGAAGCGCCCCCGGTCGAGTACGAGGACGAGATTGAGCCTGACGAG
CCGGTCGATGCGGTTGGGTGCTGCCAGCTTGATGATGCTCCGGTTGATGCCGTCGGGTCCCAGCTTGATGCTGCT
CGAGTCGATACCGTCGAATCCCAGCTTGATGATACTGCTCCAGACGACAGGGACGATGATGATGATGATGATGAT
GGTGAGTGGGAAGACGTGCTCGGATCCGTCGAGCCCCAACTCGAGACTCCCGTCGACGTCGACGACGACGCTTCC
GACGACCAAGTCGAAGCCAAACCCGACGTCCAACTCGACGTGCCAGCCGAAGACGTAGCCGACGGGCTACCAGAA
CCGTTGCCGGCCGACGTCGGCGATCCCACGGCCCTCGTCTCCGACGTATACGTCCCAGAGCCGGACTCGGACCCG
GACCGGGAAACAGTCGGCGCCACCGACCACGAGTCCGTGCCCGTCTCGGTAATGGTCATGGTTCCGTCTTCGGTT
GGAGTCGTAGTCGTAGTCGCAGTCGTAGTCGTACTGCTGTCATCATCAGGCACGCACGTCTCCGTCACGACACAC
TGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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