Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3937
Gene name
Locationscaffold_307:21743..22790
Strand-
Gene length (bp)1047
Transcript length (bp)1047
Coding sequence length (bp)1044
Protein length (aa) 348

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04488 Gly_transf_sug Glycosyltransferase sugar-binding region containing DXD motif 2.0E-07 132 165

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.5

Transmembrane Domains

Domain # Start End Length
1 7 24 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3937
MMHRSSSVTLIIAALFVILLTWPYHRLSWEAIRTRAVSLRPNKGIPNTVHFIFLLKEPDDDFPFAFSHYLSVYSA
WYYLQPSTIYLHTDAGHGQIHRARQGLAGKWAQLIMEMPGLIINRVKAPAQTNHGVEIVEMAHKSDFIRVHVLHK
LGGVYMDFDVFFIHDARPLLTTGFESVSGREPAGLMTAGIFFSRKRSTLLNLWMERMHQVFDGGWTTHSNGLMTR
IGEQLIQQNRKLLVLDESAFTPVTWESQGIKELLEVHDDVPSMLEHHSPGDKLALLNHYDEPLPSWAINFNKSYS
IHAFHIEEEGGNPVTPRKVLQRQSNIGRALYPIVRNMYHRGLVSLDDE
Coding >Ophio5|3937
ATGATGCACCGGTCTTCTTCGGTGACTCTGATCATCGCTGCTCTCTTTGTCATTCTCTTGACATGGCCCTATCAC
CGACTCAGCTGGGAGGCTATCAGGACCAGAGCGGTCTCCTTACGGCCTAACAAGGGGATTCCGAATACCGTTCAT
TTCATCTTTCTGCTGAAAGAGCCTGACGACGACTTTCCCTTTGCCTTTTCCCACTATCTTTCCGTCTATTCCGCC
TGGTATTATCTGCAGCCGAGCACCATCTATCTTCACACCGACGCTGGTCATGGGCAGATTCATCGGGCGCGACAA
GGCCTGGCTGGAAAATGGGCACAGCTCATCATGGAGATGCCCGGCTTGATCATAAACCGTGTCAAAGCCCCTGCA
CAAACGAATCACGGTGTCGAGATCGTCGAGATGGCGCACAAATCTGATTTTATTCGCGTTCATGTCCTTCATAAA
CTCGGGGGGGTTTACATGGACTTTGACGTCTTCTTCATCCACGATGCTCGACCCCTACTCACGACCGGATTCGAA
TCCGTCAGCGGACGAGAACCGGCCGGCTTGATGACGGCCGGCATATTCTTCTCTCGGAAACGAAGCACGCTGTTG
AATCTCTGGATGGAGCGAATGCATCAAGTCTTCGATGGGGGATGGACTACCCATTCCAACGGTCTGATGACGCGA
ATTGGTGAGCAGCTCATCCAGCAAAATCGAAAGCTGCTTGTCTTGGACGAGTCCGCCTTTACACCCGTCACTTGG
GAATCGCAGGGTATCAAGGAGCTCCTCGAGGTGCACGACGACGTGCCGTCCATGCTTGAACATCACAGCCCGGGA
GATAAGCTGGCTTTGCTGAACCACTACGACGAGCCTCTTCCGTCATGGGCCATCAACTTCAACAAGTCGTACAGC
ATACATGCCTTTCACATTGAAGAGGAGGGTGGGAATCCAGTCACGCCACGCAAAGTGCTGCAGCGACAAAGCAAC
ATCGGCCGAGCATTATACCCCATCGTCAGGAACATGTACCACCGAGGCCTCGTTTCGCTCGACGATGAA
Transcript >Ophio5|3937
ATGATGCACCGGTCTTCTTCGGTGACTCTGATCATCGCTGCTCTCTTTGTCATTCTCTTGACATGGCCCTATCAC
CGACTCAGCTGGGAGGCTATCAGGACCAGAGCGGTCTCCTTACGGCCTAACAAGGGGATTCCGAATACCGTTCAT
TTCATCTTTCTGCTGAAAGAGCCTGACGACGACTTTCCCTTTGCCTTTTCCCACTATCTTTCCGTCTATTCCGCC
TGGTATTATCTGCAGCCGAGCACCATCTATCTTCACACCGACGCTGGTCATGGGCAGATTCATCGGGCGCGACAA
GGCCTGGCTGGAAAATGGGCACAGCTCATCATGGAGATGCCCGGCTTGATCATAAACCGTGTCAAAGCCCCTGCA
CAAACGAATCACGGTGTCGAGATCGTCGAGATGGCGCACAAATCTGATTTTATTCGCGTTCATGTCCTTCATAAA
CTCGGGGGGGTTTACATGGACTTTGACGTCTTCTTCATCCACGATGCTCGACCCCTACTCACGACCGGATTCGAA
TCCGTCAGCGGACGAGAACCGGCCGGCTTGATGACGGCCGGCATATTCTTCTCTCGGAAACGAAGCACGCTGTTG
AATCTCTGGATGGAGCGAATGCATCAAGTCTTCGATGGGGGATGGACTACCCATTCCAACGGTCTGATGACGCGA
ATTGGTGAGCAGCTCATCCAGCAAAATCGAAAGCTGCTTGTCTTGGACGAGTCCGCCTTTACACCCGTCACTTGG
GAATCGCAGGGTATCAAGGAGCTCCTCGAGGTGCACGACGACGTGCCGTCCATGCTTGAACATCACAGCCCGGGA
GATAAGCTGGCTTTGCTGAACCACTACGACGAGCCTCTTCCGTCATGGGCCATCAACTTCAACAAGTCGTACAGC
ATACATGCCTTTCACATTGAAGAGGAGGGTGGGAATCCAGTCACGCCACGCAAAGTGCTGCAGCGACAAAGCAAC
ATCGGCCGAGCATTATACCCCATCGTCAGGAACATGTACCACCGAGGCCTCGTTTCGCTCGACGATGAATGA
Gene >Ophio5|3937
ATGATGCACCGGTCTTCTTCGGTGACTCTGATCATCGCTGCTCTCTTTGTCATTCTCTTGACATGGCCCTATCAC
CGACTCAGCTGGGAGGCTATCAGGACCAGAGCGGTCTCCTTACGGCCTAACAAGGGGATTCCGAATACCGTTCAT
TTCATCTTTCTGCTGAAAGAGCCTGACGACGACTTTCCCTTTGCCTTTTCCCACTATCTTTCCGTCTATTCCGCC
TGGTATTATCTGCAGCCGAGCACCATCTATCTTCACACCGACGCTGGTCATGGGCAGATTCATCGGGCGCGACAA
GGCCTGGCTGGAAAATGGGCACAGCTCATCATGGAGATGCCCGGCTTGATCATAAACCGTGTCAAAGCCCCTGCA
CAAACGAATCACGGTGTCGAGATCGTCGAGATGGCGCACAAATCTGATTTTATTCGCGTTCATGTCCTTCATAAA
CTCGGGGGGGTTTACATGGACTTTGACGTCTTCTTCATCCACGATGCTCGACCCCTACTCACGACCGGATTCGAA
TCCGTCAGCGGACGAGAACCGGCCGGCTTGATGACGGCCGGCATATTCTTCTCTCGGAAACGAAGCACGCTGTTG
AATCTCTGGATGGAGCGAATGCATCAAGTCTTCGATGGGGGATGGACTACCCATTCCAACGGTCTGATGACGCGA
ATTGGTGAGCAGCTCATCCAGCAAAATCGAAAGCTGCTTGTCTTGGACGAGTCCGCCTTTACACCCGTCACTTGG
GAATCGCAGGGTATCAAGGAGCTCCTCGAGGTGCACGACGACGTGCCGTCCATGCTTGAACATCACAGCCCGGGA
GATAAGCTGGCTTTGCTGAACCACTACGACGAGCCTCTTCCGTCATGGGCCATCAACTTCAACAAGTCGTACAGC
ATACATGCCTTTCACATTGAAGAGGAGGGTGGGAATCCAGTCACGCCACGCAAAGTGCTGCAGCGACAAAGCAAC
ATCGGCCGAGCATTATACCCCATCGTCAGGAACATGTACCACCGAGGCCTCGTTTCGCTCGACGATGAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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