Protein ID | Ophio5|3923 |
Gene name | |
Location | scaffold_306:14633..15248 |
Strand | + |
Gene length (bp) | 615 |
Transcript length (bp) | 615 |
Coding sequence length (bp) | 612 |
Protein length (aa) | 204 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01918 | Alba | Alba | 1.9E-06 | 71 | 130 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003676 | nucleic acid binding | Yes |
GO:0097159 | organic cyclic compound binding | No |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
GO:1901363 | heterocyclic compound binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 17 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|3923 MADSSLLASVDSSAASMPTTTTSSRRQRPLDASEEQRKRPRHQQPAALSAPHEAIITALQAQNDVLVASVISSTQ IRKRVSSATAHLATTTSPKPRLVLLHARPAQVSKLITVVEHCKRLLRPCYQYNQLFDLPAATPLTGSDDDGDEFQ VMNSSRLEKAAAVPPSRRPVKSLRVFLAVQPIPELEARAGVTLQSSDVAVSSGE |
Coding | >Ophio5|3923 ATGGCCGATTCTTCACTCTTGGCCAGCGTCGATTCATCAGCAGCATCAATGCCGACGACCACGACCAGTTCCCGG CGGCAGCGGCCTCTTGACGCATCGGAAGAGCAGCGCAAGCGGCCACGGCATCAACAGCCCGCAGCGCTGTCCGCC CCTCACGAGGCCATCATCACCGCTCTCCAAGCTCAGAACGACGTGCTCGTCGCGTCCGTCATCTCCTCGACCCAG ATCCGCAAGCGCGTCTCCTCCGCCACGGCTCACCTCGCCACGACGACGTCTCCGAAACCGCGCCTCGTCTTGCTA CACGCGCGCCCCGCCCAAGTGAGCAAGCTGATAACCGTCGTCGAGCACTGCAAGCGCCTCTTGCGGCCCTGTTAC CAGTACAATCAGCTATTCGACCTGCCTGCCGCGACGCCGCTGACGGGATCCGACGATGACGGCGACGAGTTTCAA GTCATGAACTCCAGTCGGCTCGAAAAGGCCGCTGCCGTGCCGCCGTCGCGCCGGCCTGTCAAGTCGTTGAGGGTC TTCCTCGCCGTGCAGCCGATACCGGAGCTCGAGGCAAGGGCCGGCGTCACGTTGCAGTCGAGCGACGTTGCTGTG TCGTCGGGCGAG |
Transcript | >Ophio5|3923 ATGGCCGATTCTTCACTCTTGGCCAGCGTCGATTCATCAGCAGCATCAATGCCGACGACCACGACCAGTTCCCGG CGGCAGCGGCCTCTTGACGCATCGGAAGAGCAGCGCAAGCGGCCACGGCATCAACAGCCCGCAGCGCTGTCCGCC CCTCACGAGGCCATCATCACCGCTCTCCAAGCTCAGAACGACGTGCTCGTCGCGTCCGTCATCTCCTCGACCCAG ATCCGCAAGCGCGTCTCCTCCGCCACGGCTCACCTCGCCACGACGACGTCTCCGAAACCGCGCCTCGTCTTGCTA CACGCGCGCCCCGCCCAAGTGAGCAAGCTGATAACCGTCGTCGAGCACTGCAAGCGCCTCTTGCGGCCCTGTTAC CAGTACAATCAGCTATTCGACCTGCCTGCCGCGACGCCGCTGACGGGATCCGACGATGACGGCGACGAGTTTCAA GTCATGAACTCCAGTCGGCTCGAAAAGGCCGCTGCCGTGCCGCCGTCGCGCCGGCCTGTCAAGTCGTTGAGGGTC TTCCTCGCCGTGCAGCCGATACCGGAGCTCGAGGCAAGGGCCGGCGTCACGTTGCAGTCGAGCGACGTTGCTGTG TCGTCGGGCGAGTAG |
Gene | >Ophio5|3923 ATGGCCGATTCTTCACTCTTGGCCAGCGTCGATTCATCAGCAGCATCAATGCCGACGACCACGACCAGTTCCCGG CGGCAGCGGCCTCTTGACGCATCGGAAGAGCAGCGCAAGCGGCCACGGCATCAACAGCCCGCAGCGCTGTCCGCC CCTCACGAGGCCATCATCACCGCTCTCCAAGCTCAGAACGACGTGCTCGTCGCGTCCGTCATCTCCTCGACCCAG ATCCGCAAGCGCGTCTCCTCCGCCACGGCTCACCTCGCCACGACGACGTCTCCGAAACCGCGCCTCGTCTTGCTA CACGCGCGCCCCGCCCAAGTGAGCAAGCTGATAACCGTCGTCGAGCACTGCAAGCGCCTCTTGCGGCCCTGTTAC CAGTACAATCAGCTATTCGACCTGCCTGCCGCGACGCCGCTGACGGGATCCGACGATGACGGCGACGAGTTTCAA GTCATGAACTCCAGTCGGCTCGAAAAGGCCGCTGCCGTGCCGCCGTCGCGCCGGCCTGTCAAGTCGTTGAGGGTC TTCCTCGCCGTGCAGCCGATACCGGAGCTCGAGGCAAGGGCCGGCGTCACGTTGCAGTCGAGCGACGTTGCTGTG TCGTCGGGCGAGTAG |