© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|388 |
| Gene name | |
| Location | scaffold_109:41268..42282 |
| Strand | - |
| Gene length (bp) | 1014 |
| Transcript length (bp) | 888 |
| Coding sequence length (bp) | 885 |
| Protein length (aa) | 295 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF20238 | DUF6595 | Family of unknown function (DUF6595) | 1.3E-32 | 44 | 190 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 23 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 238 | 260 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|388 MRCSLENTLAVGLALLVTRTSAGHGDTQKSPNNPSTASVTDDTMGPASHLWPPTRKWTADTDNTPPCGSSAAVGF RTKFPMKGGKVSLVAQDDYYDVQISISYKKNPTENSDFTPLAVARKINDLNPGHTCVDVPDAPTDVVSPGTNATL QTIYRSNWDKPENQTFYVCSDITFVPAEGFKGRMMCFDATEPGEDDQNPPWIKKVDKKPLGQGPSDKAPAVESVS SSGSGSKLGSGAIAGISIGALAGSAVVAAIALLLYRRGQQKKRSQRIARMENARQDQGPMEKYSGGDNNA |
| Coding | >Ophio5|388 ATGCGCTGCTCTCTCGAAAACACGCTGGCCGTCGGCCTGGCCCTCTTGGTGACCAGAACTTCCGCCGGCCACGGT GATACACAGAAGTCACCCAACAACCCGTCGACGGCTTCCGTCACCGATGACACTATGGGACCTGCTTCTCATTTG TGGCCTCCAACCCGAAAGTGGACGGCCGACACGGACAACACGCCGCCTTGCGGTTCCTCGGCCGCCGTCGGTTTC CGGACCAAATTTCCCATGAAGGGTGGCAAGGTTTCCCTGGTTGCTCAGGACGACTATTATGATGTCCAGATCAGC ATCTCGTACAAGAAGAACCCGACTGAGAACAGCGACTTCACGCCTTTGGCCGTCGCCAGGAAGATCAACGACCTC AACCCGGGCCACACCTGTGTTGACGTTCCCGACGCACCCACAGACGTCGTCTCCCCCGGAACCAACGCCACGCTG CAAACCATCTACAGAAGCAACTGGGACAAGCCCGAGAACCAGACGTTTTACGTCTGCTCCGACATCACCTTCGTA CCGGCGGAAGGCTTCAAGGGTAGGATGATGTGCTTCGACGCGACGGAGCCCGGCGAGGATGACCAGAACCCGCCG TGGATCAAGAAAGTGGACAAGAAGCCGCTGGGCCAAGGCCCGAGCGACAAGGCGCCGGCCGTCGAGTCCGTCTCC AGCTCCGGATCAGGCTCGAAGCTGGGCAGCGGTGCCATCGCCGGCATCAGCATCGGTGCTCTGGCTGGTTCGGCC GTGGTGGCAGCCATTGCGCTTCTCCTGTACCGTCGCGGACAGCAGAAGAAGCGCAGCCAGCGCATCGCTCGGATG GAGAACGCTCGTCAGGATCAGGGACCCATGGAAAAGTACAGCGGCGGTGACAACAACGCG |
| Transcript | >Ophio5|388 ATGCGCTGCTCTCTCGAAAACACGCTGGCCGTCGGCCTGGCCCTCTTGGTGACCAGAACTTCCGCCGGCCACGGT GATACACAGAAGTCACCCAACAACCCGTCGACGGCTTCCGTCACCGATGACACTATGGGACCTGCTTCTCATTTG TGGCCTCCAACCCGAAAGTGGACGGCCGACACGGACAACACGCCGCCTTGCGGTTCCTCGGCCGCCGTCGGTTTC CGGACCAAATTTCCCATGAAGGGTGGCAAGGTTTCCCTGGTTGCTCAGGACGACTATTATGATGTCCAGATCAGC ATCTCGTACAAGAAGAACCCGACTGAGAACAGCGACTTCACGCCTTTGGCCGTCGCCAGGAAGATCAACGACCTC AACCCGGGCCACACCTGTGTTGACGTTCCCGACGCACCCACAGACGTCGTCTCCCCCGGAACCAACGCCACGCTG CAAACCATCTACAGAAGCAACTGGGACAAGCCCGAGAACCAGACGTTTTACGTCTGCTCCGACATCACCTTCGTA CCGGCGGAAGGCTTCAAGGGTAGGATGATGTGCTTCGACGCGACGGAGCCCGGCGAGGATGACCAGAACCCGCCG TGGATCAAGAAAGTGGACAAGAAGCCGCTGGGCCAAGGCCCGAGCGACAAGGCGCCGGCCGTCGAGTCCGTCTCC AGCTCCGGATCAGGCTCGAAGCTGGGCAGCGGTGCCATCGCCGGCATCAGCATCGGTGCTCTGGCTGGTTCGGCC GTGGTGGCAGCCATTGCGCTTCTCCTGTACCGTCGCGGACAGCAGAAGAAGCGCAGCCAGCGCATCGCTCGGATG GAGAACGCTCGTCAGGATCAGGGACCCATGGAAAAGTACAGCGGCGGTGACAACAACGCGTAG |
| Gene | >Ophio5|388 ATGCGCTGCTCTCTCGAAAACACGCTGGCCGTCGGCCTGGCCCTCTTGGTGACCAGAACTTCCGCCGGCCACGGT GATACACAGAAGTCACCCAACAACCCGTCGACGGCTTCCGTCACCGATGACACTATGGGACCTGCTTCTCATTTG TGGCCTCCAACCCGAAAGTGGACGGCCGACACGGACAACACGCCGCCTTGCGGTTCCTCGGCCGCCGTCGGTTTC CGGACCAAATTTCCCATGAGTGAGCCTGGCCCTTGGGCTTCGGCTTTTAAAAAAACAATAAGGGATTGCTGACGT TGATAACCGCCGATTAAGAGGGTGGCAAGGTTTCCCTGGTTGCTCAGGACGACTATTATGATGTCCAGATCAGCA TCTCGTACAAGAAGAGTCTGTAACCTGTTGTTCGGAACCGGCTTTTCCCCGATGCTAACATCAACAGACCCGACT GAGAACAGCGACTTCACGCCTTTGGCCGTCGCCAGGAAGATCAACGACCTCAACCCGGGCCACACCTGTGTTGAC GTTCCCGACGCACCCACAGACGTCGTCTCCCCCGGAACCAACGCCACGCTGCAAACCATCTACAGAAGCAACTGG GACAAGCCCGAGAACCAGACGTTTTACGTCTGCTCCGACATCACCTTCGTACCGGCGGAAGGCTTCAAGGGTAGG ATGATGTGCTTCGACGCGACGGAGCCCGGCGAGGATGACCAGAACCCGCCGTGGATCAAGAAAGTGGACAAGAAG CCGCTGGGCCAAGGCCCGAGCGACAAGGCGCCGGCCGTCGAGTCCGTCTCCAGCTCCGGATCAGGCTCGAAGCTG GGCAGCGGTGCCATCGCCGGCATCAGCATCGGTGCTCTGGCTGGTTCGGCCGTGGTGGCAGCCATTGCGCTTCTC CTGTACCGTCGCGGACAGCAGAAGAAGCGCAGCCAGCGCATCGCTCGGATGGAGAACGCTCGTCAGGATCAGGGA CCCATGGAAAAGTACAGCGGCGGTGACAACAACGCGTAG |