Protein ID | Ophio5|3878 |
Gene name | |
Location | scaffold_301:17270..18896 |
Strand | + |
Gene length (bp) | 1626 |
Transcript length (bp) | 1377 |
Coding sequence length (bp) | 1374 |
Protein length (aa) | 458 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02179 | BAG | BAG domain | 2.5E-20 | 375 | 455 |
GO Term | Description | Terminal node |
---|---|---|
GO:0051087 | chaperone binding | Yes |
GO:0005515 | protein binding | No |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 21 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 137 | 159 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|3878 MVSSNCKRLHISEKRGTSTAAPSHVPQSTGSAPVLESEGAQLLASNPTVNCPPSTFALPDSFATISSHGGASIFS AITNNRFEGCPPKGHLPVDKVDSRKAAEASSGALQTITAYLYGKFISLWSNFRKSSDYLSNTLGVAPGILFSGLA ALLALPFAMSRHWPWRRDQSVPYSSPGGVPAVTDEDFSYITSQELADGPSLDSRHHHHVNASSPSSAVLDDDILL IKNNGVTHTARFPAYSIGDGKLRVMDVRERAGLMMELPDRITARLKLLYKGRQLDEPSAPARYYGVKNKSELMAV VPDMGDRIAGSSGEEMVVVDEPSRDDSKLRRRKKRKTKKRSPGGEGDSASSPRDSSSHSKSPPPVAAGIVPMKQI EDLSSEFTTRWLPLCVRYTASPPADRKAREEEHRKLSETLLQNILLKLDGVDTEGVAEVRTKRKELVHRVQEVLK GLDGAAKV |
Coding | >Ophio5|3878 ATGGTCTCTTCAAACTGCAAGCGACTACATATCAGCGAGAAACGTGGTACTAGTACTGCTGCACCCTCTCACGTC CCGCAATCGACTGGCTCTGCCCCCGTCTTGGAATCCGAGGGAGCCCAGCTGCTGGCGTCAAACCCTACCGTAAAC TGTCCGCCAAGCACCTTCGCTCTTCCCGATAGCTTTGCAACAATCTCAAGCCACGGCGGTGCATCAATCTTCTCT GCAATCACCAACAATCGATTCGAGGGGTGTCCTCCCAAGGGCCACCTTCCAGTCGACAAGGTGGATTCCAGAAAG GCCGCCGAGGCATCCTCTGGAGCCCTTCAGACCATCACGGCCTACCTCTACGGAAAATTCATCAGCCTGTGGTCC AACTTCCGCAAGTCGAGCGATTACCTTTCCAACACGCTCGGTGTGGCGCCAGGGATCCTCTTCAGTGGCCTCGCT GCTCTCTTGGCCCTCCCGTTTGCCATGTCGCGACACTGGCCTTGGAGGCGCGATCAGAGCGTTCCCTACAGCTCA CCCGGTGGAGTTCCCGCTGTGACAGACGAAGACTTTAGCTACATCACGTCTCAGGAACTGGCCGACGGCCCCTCG TTGGACAGCCGTCACCACCATCACGTCAATGCGTCGTCGCCTAGTTCGGCTGTGCTCGACGACGACATTCTCCTC ATTAAGAACAACGGCGTAACGCATACCGCCCGCTTTCCCGCTTACTCCATCGGGGACGGAAAATTGCGCGTCATG GACGTCCGGGAGCGCGCAGGACTTATGATGGAACTGCCCGATCGAATCACCGCCCGCCTCAAGCTGCTGTATAAA GGCAGGCAGCTGGACGAGCCATCCGCTCCAGCTCGTTATTACGGAGTCAAGAACAAGAGCGAACTGATGGCTGTC GTGCCCGACATGGGCGACAGAATTGCCGGCTCTTCAGGGGAAGAAATGGTAGTCGTTGACGAACCATCCAGGGAC GATTCCAAGTTGCGACGCCGTAAGAAGAGGAAGACAAAGAAAAGGTCCCCTGGAGGGGAAGGCGACTCTGCGAGC AGCCCCCGCGACAGCTCTTCGCACTCCAAGTCACCGCCTCCAGTGGCCGCGGGGATCGTGCCAATGAAACAAATC GAGGACTTGTCCAGCGAGTTCACGACGAGGTGGCTACCGCTCTGCGTACGGTACACCGCCTCGCCGCCTGCCGAC CGCAAGGCTCGGGAGGAGGAACACAGGAAGCTCTCCGAGACGCTGCTGCAGAACATCTTGCTGAAGCTCGACGGC GTCGACACCGAGGGCGTGGCCGAGGTCAGGACTAAGAGGAAAGAGCTGGTGCACAGAGTTCAGGAGGTTCTCAAA GGCTTGGACGGCGCGGCCAAGGTC |
Transcript | >Ophio5|3878 ATGGTCTCTTCAAACTGCAAGCGACTACATATCAGCGAGAAACGTGGTACTAGTACTGCTGCACCCTCTCACGTC CCGCAATCGACTGGCTCTGCCCCCGTCTTGGAATCCGAGGGAGCCCAGCTGCTGGCGTCAAACCCTACCGTAAAC TGTCCGCCAAGCACCTTCGCTCTTCCCGATAGCTTTGCAACAATCTCAAGCCACGGCGGTGCATCAATCTTCTCT GCAATCACCAACAATCGATTCGAGGGGTGTCCTCCCAAGGGCCACCTTCCAGTCGACAAGGTGGATTCCAGAAAG GCCGCCGAGGCATCCTCTGGAGCCCTTCAGACCATCACGGCCTACCTCTACGGAAAATTCATCAGCCTGTGGTCC AACTTCCGCAAGTCGAGCGATTACCTTTCCAACACGCTCGGTGTGGCGCCAGGGATCCTCTTCAGTGGCCTCGCT GCTCTCTTGGCCCTCCCGTTTGCCATGTCGCGACACTGGCCTTGGAGGCGCGATCAGAGCGTTCCCTACAGCTCA CCCGGTGGAGTTCCCGCTGTGACAGACGAAGACTTTAGCTACATCACGTCTCAGGAACTGGCCGACGGCCCCTCG TTGGACAGCCGTCACCACCATCACGTCAATGCGTCGTCGCCTAGTTCGGCTGTGCTCGACGACGACATTCTCCTC ATTAAGAACAACGGCGTAACGCATACCGCCCGCTTTCCCGCTTACTCCATCGGGGACGGAAAATTGCGCGTCATG GACGTCCGGGAGCGCGCAGGACTTATGATGGAACTGCCCGATCGAATCACCGCCCGCCTCAAGCTGCTGTATAAA GGCAGGCAGCTGGACGAGCCATCCGCTCCAGCTCGTTATTACGGAGTCAAGAACAAGAGCGAACTGATGGCTGTC GTGCCCGACATGGGCGACAGAATTGCCGGCTCTTCAGGGGAAGAAATGGTAGTCGTTGACGAACCATCCAGGGAC GATTCCAAGTTGCGACGCCGTAAGAAGAGGAAGACAAAGAAAAGGTCCCCTGGAGGGGAAGGCGACTCTGCGAGC AGCCCCCGCGACAGCTCTTCGCACTCCAAGTCACCGCCTCCAGTGGCCGCGGGGATCGTGCCAATGAAACAAATC GAGGACTTGTCCAGCGAGTTCACGACGAGGTGGCTACCGCTCTGCGTACGGTACACCGCCTCGCCGCCTGCCGAC CGCAAGGCTCGGGAGGAGGAACACAGGAAGCTCTCCGAGACGCTGCTGCAGAACATCTTGCTGAAGCTCGACGGC GTCGACACCGAGGGCGTGGCCGAGGTCAGGACTAAGAGGAAAGAGCTGGTGCACAGAGTTCAGGAGGTTCTCAAA GGCTTGGACGGCGCGGCCAAGGTCTAG |
Gene | >Ophio5|3878 ATGGTCTCTTCAAACTGCAAGCGACTACATAGTAGGAGCTGAGAACAATCCTGCCGTCTGCCTCGCATCAAACGA GAGCACAATTGCGAAATACGGGGACATTGACGCCCATTATTCAGTCAGCGAGAAACGTGGTACTAGTACTGCTGC ACGTAAGCGACCAGGTTGCTGCACCTCTCTTCGCACCATCACCTGACTTCCCTGCCCTTCTGAGCCTCTCACGTT TGATCCCATCTTGCAAAGACTTTGGCTTTCTCAGCCCCTTCAGCCTCGTCGGTTAACCTGTCACCCGGCCACCGA GGCCTTAACATTCGGCTCAAGGTCCCGCAATCGACTGGCTCTGCCCCCGTCTTGGAATCCGAGGGAGCCCAGCTG CTGGCGTCAAACCCTACCGTAAACTGTCCGCCAAGCACCTTCGCTCTTCCCGATAGCTTTGCAACAATCTCAAGC CACGGCGGTGCATCAATCTTCTCTGCAATCACCAACAATCGATTCGAGGGGTGTCCTCCCAAGGGCCACCTTCCA GTCGACAAGGTGGATTCCAGAAAGGCCGCCGAGGCATCCTCTGGAGCCCTTCAGACCATCACGGCCTACCTCTAC GGAAAATTCATCAGCCTGTGGTCCAACTTCCGCAAGTCGAGCGATTACCTTTCCAACACGCTCGGTGTGGCGCCA GGGATCCTCTTCAGTGGCCTCGCTGCTCTCTTGGCCCTCCCGTTTGCCATGTCGCGACACTGGCCTTGGAGGCGC GATCAGAGCGTTCCCTACAGCTCACCCGGTGGAGTTCCCGCTGTGACAGACGAAGACTTTAGCTACATCACGTCT CAGGAACTGGCCGACGGCCCCTCGTTGGACAGCCGTCACCACCATCACGTCAATGCGTCGTCGCCTAGTTCGGCT GTGCTCGACGACGACATTCTCCTCATTAAGAACAACGGCGTAACGCATACCGCCCGCTTTCCCGCTTACTCCATC GGGGACGGAAAATTGCGCGTCATGGACGTCCGGGAGCGCGCAGGACTTATGATGGAACTGCCCGATCGAATCACC GCCCGCCTCAAGCTGCTGTATAAAGGCAGGCAGCTGGACGAGCCATCCGCTCCAGCTCGTTATTACGGAGTCAAG AACAAGAGCGAACTGATGGCTGTCGTGCCCGACATGGGCGACAGAATTGCCGGCTCTTCAGGGGAAGAAATGGTA GTCGTTGACGAACCATCCAGGGACGATTCCAAGTTGCGACGCCGTAAGAAGAGGAAGACAAAGAAAAGGTCCCCT GGAGGGGAAGGCGACTCTGCGAGCAGCCCCCGCGACAGCTCTTCGCACTCCAAGTCACCGCCTCCAGTGGCCGCG GGGATCGTGCCAATGAAACAAATCGAGGACTTGTCCAGCGAGTTCACGACGAGGTGGCTACCGCTCTGCGTACGG TACACCGCCTCGCCGCCTGCCGACCGCAAGGCTCGGGAGGAGGAACACAGGAAGCTCTCCGAGACGCTGCTGCAG AACATCTTGCTGAAGCTCGACGGCGTCGACACCGAGGGCGTGGCCGAGGTCAGGACTAAGAGGAAAGAGCTGGTG CACAGAGTTCAGGAGGTTCTCAAAGGCTTGGACGGCGCGGCCAAGGTCTAG |