Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3868
Gene name
Locationscaffold_300:10808..11628
Strand+
Gene length (bp)820
Transcript length (bp)615
Coding sequence length (bp)612
Protein length (aa) 204

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04191 PEMT Phospholipid methyltransferase 1.2E-31 88 189

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P05375|PEM2_YEAST Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPI3 PE=1 SV=1 5 193 2.0E-68
sp|O74827|CHO1_SCHPO Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cho1 PE=3 SV=1 9 194 1.0E-62
sp|Q54SD5|PEM2_DICDI Putative phosphatidylethanolamine N-methyltransferase OS=Dictyostelium discoideum GN=pem2 PE=3 SV=1 5 187 3.0E-50
sp|Q7YRH6|PEMT_BOVIN Phosphatidylethanolamine N-methyltransferase OS=Bos taurus GN=PEMT PE=2 SV=1 5 192 1.0E-47
sp|Q61907|PEMT_MOUSE Phosphatidylethanolamine N-methyltransferase OS=Mus musculus GN=Pemt PE=1 SV=4 5 189 2.0E-47
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P05375|PEM2_YEAST Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPI3 PE=1 SV=1 5 193 2.0E-68
sp|O74827|CHO1_SCHPO Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cho1 PE=3 SV=1 9 194 1.0E-62
sp|Q54SD5|PEM2_DICDI Putative phosphatidylethanolamine N-methyltransferase OS=Dictyostelium discoideum GN=pem2 PE=3 SV=1 5 187 3.0E-50
sp|Q7YRH6|PEMT_BOVIN Phosphatidylethanolamine N-methyltransferase OS=Bos taurus GN=PEMT PE=2 SV=1 5 192 1.0E-47
sp|Q61907|PEMT_MOUSE Phosphatidylethanolamine N-methyltransferase OS=Mus musculus GN=Pemt PE=1 SV=4 5 189 2.0E-47
sp|Q9UBM1|PEMT_HUMAN Phosphatidylethanolamine N-methyltransferase OS=Homo sapiens GN=PEMT PE=1 SV=4 5 203 4.0E-41
sp|Q08388|PEMT_RAT Phosphatidylethanolamine N-methyltransferase OS=Rattus norvegicus GN=Pemt PE=1 SV=2 5 189 1.0E-37
sp|Q54H80|PEMTL_DICDI PEMT/PEM2 methyltransferase family protein OS=Dictyostelium discoideum GN=DDB_G0289645 PE=3 SV=1 10 193 8.0E-18
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 32 0.5

Transmembrane Domains

Domain # Start End Length
1 10 29 19
2 50 69 19
3 89 111 22
4 120 142 22
5 152 174 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3868
MAPLVDFDKQSLLVSLCSITFNPLFWNIVARQEYHNKLLTKLFGGHSRRACYALAVTIFSLGLVRDWLYKTAIKE
QPSHPLLLTPVSQIAAYALLAAGNILVLSSTWALGITGTFLGDYFGILMDHVVTGFPFNVCGAPMYWGSTMSFLG
TALLFGKPAGIFITVWVYVVYCLALRYEDPFTAAIYAKRERERAAAGGSAKKQI
Coding >Ophio5|3868
ATGGCGCCTCTCGTCGACTTTGACAAGCAGAGCTTGTTGGTTTCCTTGTGCTCCATTACCTTTAACCCGCTATTC
TGGAACATCGTCGCACGTCAAGAATACCACAATAAGCTGTTGACGAAGCTCTTCGGCGGCCACTCTCGTCGCGCC
TGCTATGCCCTTGCCGTCACCATCTTCTCGCTCGGCCTGGTGCGAGACTGGCTCTATAAGACGGCTATCAAGGAA
CAGCCGTCGCATCCGCTGCTGCTGACGCCCGTCTCGCAAATTGCCGCCTACGCTCTGCTCGCCGCCGGCAATATC
CTCGTTCTCTCCTCTACCTGGGCGCTGGGCATCACAGGCACCTTCTTGGGCGACTACTTTGGCATCCTCATGGAC
CACGTCGTCACCGGGTTTCCCTTCAACGTCTGCGGTGCTCCCATGTATTGGGGCTCTACTATGAGCTTTCTCGGT
ACCGCCTTGCTGTTCGGCAAGCCTGCTGGCATCTTCATCACCGTTTGGGTCTATGTCGTCTACTGCTTGGCCCTA
CGCTACGAGGACCCTTTTACTGCTGCCATCTATGCCAAGCGCGAACGTGAAAGGGCCGCTGCAGGCGGCTCTGCC
AAGAAGCAAATC
Transcript >Ophio5|3868
ATGGCGCCTCTCGTCGACTTTGACAAGCAGAGCTTGTTGGTTTCCTTGTGCTCCATTACCTTTAACCCGCTATTC
TGGAACATCGTCGCACGTCAAGAATACCACAATAAGCTGTTGACGAAGCTCTTCGGCGGCCACTCTCGTCGCGCC
TGCTATGCCCTTGCCGTCACCATCTTCTCGCTCGGCCTGGTGCGAGACTGGCTCTATAAGACGGCTATCAAGGAA
CAGCCGTCGCATCCGCTGCTGCTGACGCCCGTCTCGCAAATTGCCGCCTACGCTCTGCTCGCCGCCGGCAATATC
CTCGTTCTCTCCTCTACCTGGGCGCTGGGCATCACAGGCACCTTCTTGGGCGACTACTTTGGCATCCTCATGGAC
CACGTCGTCACCGGGTTTCCCTTCAACGTCTGCGGTGCTCCCATGTATTGGGGCTCTACTATGAGCTTTCTCGGT
ACCGCCTTGCTGTTCGGCAAGCCTGCTGGCATCTTCATCACCGTTTGGGTCTATGTCGTCTACTGCTTGGCCCTA
CGCTACGAGGACCCTTTTACTGCTGCCATCTATGCCAAGCGCGAACGTGAAAGGGCCGCTGCAGGCGGCTCTGCC
AAGAAGCAAATCTGA
Gene >Ophio5|3868
ATGGCGCCTCTCGTCGACTTTGACAAGCAGAGCTTGTTGGGTGGGTGCTTCCGCCGTAATTTCGTTTGCCGTACC
GAGTCTGATAGAAGATCTTCTTTTTTTTTTTGGTGTTATCCTACTCGTGCAGTTTCCTTGTGCTCCATTACCTTT
AACCCGCTATTCTGGAAGTGAGTTGGTTTCGCGTAACGAGGGCGAAAGCCGACAGATAGTCGCTAACTCCTTAAG
CATCGTCGCACGTCAAGGTCCGGGCTCTTTCCCGCTGGTACGAGAAAGCGTCAAGAGCTAAAGCGCACAAGGAGC
AGAATACCACAATAAGCTGTTGACGAAGCTCTTCGGCGGCCACTCTCGTCGCGCCTGCTATGCCCTTGCCGTCAC
CATCTTCTCGCTCGGCCTGGTGCGAGACTGGCTCTATAAGACGGCTATCAAGGAACAGCCGTCGCATCCGCTGCT
GCTGACGCCCGTCTCGCAAATTGCCGCCTACGCTCTGCTCGCCGCCGGCAATATCCTCGTTCTCTCCTCTACCTG
GGCGCTGGGCATCACAGGCACCTTCTTGGGCGACTACTTTGGCATCCTCATGGACCACGTCGTCACCGGGTTTCC
CTTCAACGTCTGCGGTGCTCCCATGTATTGGGGCTCTACTATGAGCTTTCTCGGTACCGCCTTGCTGTTCGGCAA
GCCTGCTGGCATCTTCATCACCGTTTGGGTCTATGTCGTCTACTGCTTGGCCCTACGCTACGAGGACCCTTTTAC
TGCTGCCATCTATGCCAAGCGCGAACGTGAAAGGGCCGCTGCAGGCGGCTCTGCCAAGAAGCAAATCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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