Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3862
Gene name
Locationscaffold_30:67588..69442
Strand-
Gene length (bp)1854
Transcript length (bp)1506
Coding sequence length (bp)1503
Protein length (aa) 501

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 27 0.45

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 423 445 22
3 452 469 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3862
MTRPTKIFSWLRGLCFLYLFASLAEAISWGGSHSQGGFTTTRQIRMGFRDSPQPMQSSAKSEIYAVTLRELQELE
SEPLCHRIAARLLVNNCQLLDGQDEASVLTDSGRATRDFVDFFAASLAICDLERGSFLIPQSCSQFREPILAELP
VPPKPQLHVSPSDIDNCLRGLARSDSAWNTWVSYRHKALRFCDAARADNEKDKNIHVFQRITKVMDRLATQIDTE
LGARFEHLNKMFKDTTANVDGISPKLDELRAGLVRLGQTVSRDVYQGTQRTTVSLEKGLKSAQGLELLLERLLAT
TLEHAERVERSHESALRVATDSIGADVGTVMTILETAVEASTSLQRELMESQSRAAEITQSQERIEAGMQRLSKA
ASILSVAQERHSAMLERAQQSALQLSDTLLSASASAENFRNSLLGGFGLVKWWPCFVFPAMLLIVGSYGLPPSAA
RNIVLVCLGGAFGFLMLLVKQTSTGLMDDAVLLAKETGAAYENASAHSGYG
Coding >Ophio5|3862
ATGACGCGCCCGACCAAGATATTTTCCTGGCTTCGCGGCCTATGCTTTCTTTATCTCTTCGCCTCTCTCGCTGAG
GCTATCTCATGGGGCGGTAGTCACTCGCAGGGTGGATTTACAACCACGAGACAAATACGCATGGGCTTCCGCGAC
TCTCCTCAGCCGATGCAATCCAGTGCCAAGTCTGAGATATACGCCGTCACTCTGAGAGAGCTCCAGGAGCTCGAG
TCGGAGCCTCTCTGTCACCGCATCGCCGCGCGTCTTCTCGTCAACAACTGCCAGCTGTTGGATGGTCAAGATGAA
GCTTCTGTTCTGACTGACAGCGGCAGAGCTACCAGGGATTTTGTGGACTTCTTTGCTGCCAGCCTCGCCATATGC
GACCTGGAGCGAGGAAGCTTTCTCATCCCCCAGTCTTGTTCCCAGTTTCGAGAGCCTATCCTCGCGGAATTACCG
GTCCCCCCCAAGCCCCAGCTTCACGTGTCGCCGTCCGACATAGACAACTGCCTCAGAGGCCTCGCTCGGTCTGAT
TCGGCATGGAACACTTGGGTCAGTTACAGGCACAAGGCGCTGAGGTTCTGCGACGCGGCTCGCGCCGACAACGAG
AAGGACAAGAACATTCATGTCTTCCAGAGAATCACTAAAGTGATGGACAGGCTCGCAACTCAGATAGACACAGAG
CTCGGCGCGCGGTTTGAACACCTGAACAAAATGTTCAAAGACACGACAGCCAACGTGGATGGCATCAGTCCAAAA
CTTGACGAGCTGAGAGCTGGTCTTGTTCGGCTTGGGCAGACTGTATCCCGAGATGTATATCAAGGCACACAGCGA
ACGACAGTTAGTTTGGAGAAGGGTCTGAAAAGCGCACAAGGCCTAGAGCTCTTGCTGGAAAGGCTGCTGGCGACG
ACGCTGGAACATGCTGAGAGAGTTGAGCGCTCGCACGAGTCGGCGTTGCGTGTTGCCACCGACAGCATCGGTGCC
GACGTCGGAACCGTCATGACAATACTAGAGACGGCTGTCGAGGCCTCTACGAGTTTGCAACGAGAGCTCATGGAG
TCGCAGTCTCGAGCAGCTGAGATAACTCAAAGTCAAGAGCGAATTGAGGCGGGGATGCAAAGGCTGTCAAAGGCT
GCGAGTATCCTGAGCGTCGCGCAAGAGCGTCACTCTGCGATGCTTGAGCGGGCGCAGCAGTCAGCCTTGCAGCTG
TCAGACACTTTGCTATCGGCCTCAGCGTCAGCCGAAAACTTCAGAAACTCGTTATTGGGTGGTTTCGGGTTGGTG
AAATGGTGGCCATGTTTCGTTTTTCCGGCAATGCTCCTCATTGTCGGGTCGTACGGCCTTCCTCCCTCTGCTGCA
AGGAACATCGTTCTCGTTTGTCTGGGGGGAGCATTTGGGTTTCTGATGCTCTTGGTGAAGCAGACGAGCACCGGC
CTGATGGATGACGCGGTGCTGCTCGCCAAAGAGACGGGCGCGGCGTATGAGAACGCATCCGCCCACTCTGGCTAC
GGT
Transcript >Ophio5|3862
ATGACGCGCCCGACCAAGATATTTTCCTGGCTTCGCGGCCTATGCTTTCTTTATCTCTTCGCCTCTCTCGCTGAG
GCTATCTCATGGGGCGGTAGTCACTCGCAGGGTGGATTTACAACCACGAGACAAATACGCATGGGCTTCCGCGAC
TCTCCTCAGCCGATGCAATCCAGTGCCAAGTCTGAGATATACGCCGTCACTCTGAGAGAGCTCCAGGAGCTCGAG
TCGGAGCCTCTCTGTCACCGCATCGCCGCGCGTCTTCTCGTCAACAACTGCCAGCTGTTGGATGGTCAAGATGAA
GCTTCTGTTCTGACTGACAGCGGCAGAGCTACCAGGGATTTTGTGGACTTCTTTGCTGCCAGCCTCGCCATATGC
GACCTGGAGCGAGGAAGCTTTCTCATCCCCCAGTCTTGTTCCCAGTTTCGAGAGCCTATCCTCGCGGAATTACCG
GTCCCCCCCAAGCCCCAGCTTCACGTGTCGCCGTCCGACATAGACAACTGCCTCAGAGGCCTCGCTCGGTCTGAT
TCGGCATGGAACACTTGGGTCAGTTACAGGCACAAGGCGCTGAGGTTCTGCGACGCGGCTCGCGCCGACAACGAG
AAGGACAAGAACATTCATGTCTTCCAGAGAATCACTAAAGTGATGGACAGGCTCGCAACTCAGATAGACACAGAG
CTCGGCGCGCGGTTTGAACACCTGAACAAAATGTTCAAAGACACGACAGCCAACGTGGATGGCATCAGTCCAAAA
CTTGACGAGCTGAGAGCTGGTCTTGTTCGGCTTGGGCAGACTGTATCCCGAGATGTATATCAAGGCACACAGCGA
ACGACAGTTAGTTTGGAGAAGGGTCTGAAAAGCGCACAAGGCCTAGAGCTCTTGCTGGAAAGGCTGCTGGCGACG
ACGCTGGAACATGCTGAGAGAGTTGAGCGCTCGCACGAGTCGGCGTTGCGTGTTGCCACCGACAGCATCGGTGCC
GACGTCGGAACCGTCATGACAATACTAGAGACGGCTGTCGAGGCCTCTACGAGTTTGCAACGAGAGCTCATGGAG
TCGCAGTCTCGAGCAGCTGAGATAACTCAAAGTCAAGAGCGAATTGAGGCGGGGATGCAAAGGCTGTCAAAGGCT
GCGAGTATCCTGAGCGTCGCGCAAGAGCGTCACTCTGCGATGCTTGAGCGGGCGCAGCAGTCAGCCTTGCAGCTG
TCAGACACTTTGCTATCGGCCTCAGCGTCAGCCGAAAACTTCAGAAACTCGTTATTGGGTGGTTTCGGGTTGGTG
AAATGGTGGCCATGTTTCGTTTTTCCGGCAATGCTCCTCATTGTCGGGTCGTACGGCCTTCCTCCCTCTGCTGCA
AGGAACATCGTTCTCGTTTGTCTGGGGGGAGCATTTGGGTTTCTGATGCTCTTGGTGAAGCAGACGAGCACCGGC
CTGATGGATGACGCGGTGCTGCTCGCCAAAGAGACGGGCGCGGCGTATGAGAACGCATCCGCCCACTCTGGCTAC
GGTTGA
Gene >Ophio5|3862
ATGACGCGCCCGACCAAGATATTTTCCTGGCTTCGCGGCCTATGCTTTCTTTATCTCTTCGCCTCTCTCGCTGAG
GCTATCTCATGGGGCGGTAGTCACTCGCAGGGTGGTAAGTACATGCCTTAGACTCCAGGATCGTTCCGTTGCCTA
AGCATCATCCACTAGGATTTACAACCACGAGACAAATACGCATGGGCTTCCGCGACTCTCCTCAGCCGATGCAAT
CCAGTGCCAAGTCTGAGATATACGCCGTCACTCTGAGAGAGCTCCAGGAGCTCGAGTCGGAGCCTCTCTGTCACC
GCATCGCCGCGCGTCTTCTCGTCAACAACTGCCAGCTGTTGGATGGTCAAGATGAAGCTTCTGTTCTGACTGACA
GCGGCAGAGCTACCAGGGATTTTGTGGACTTCTTTGCTGCCAGCCTCGCCATATGCGACCTGGAGCGAGGAAGCT
TTCTCATCCCCCAGTCTTGTTCCCAGTTTCGAGAGCCTATCCTCGCGGAATTACCGGTCCCCCCCAAGCCCCAGC
TTCACGTGTCGCCGTCCGACATAGACAACTGCCTCAGAGGCCTCGCTCGGTCTGATTCGGCATGGAACACTTGGG
TCAGTTACAGGCACAAGGCGCTGAGGTTCTGCGACGCGGCTCGCGCCGACAACGAGAAGGGCTTGTTTCTCCCAT
CACCCCTTTGACTCTGAAGCTTCTAACCGCTTCATCTCACAGACAAGAACATTCATGTCTTCCAGAGAATCACTA
AAGTGATGGACAGGCTCGCAACTCAGATAGACACAGAGCTCGGCGCGCGGTTTGAACACCTGAACAAAATGTTCA
AAGACACGACAGCCAACGTGGATGGCATCAGTCCAAAACTTGACGAGCTGAGAGCTGGTCTTGTTCGGCTTGGGC
AGACTGTATCCCGAGATGTATATCAAGGCACACAGGTAAAGATGTTAACTGGCCCAAGTTGTGGTTTCCCCGCTA
ACGGTGTAGGTAGCGAACGACAGTTAGTTTGGAGAAGGGTCTGAAAAGCGCACAAGGCCTAGAGCTCTTGCTGGA
AAGGCTGCTGGCGACGACGCTGGAACATGCTGAGAGAGTTGAGCGCTCGCACGAGTCGGCGTTGCGTGTTGCCAC
CGACAGCATCGGTGCCGACGTCGGAACCGTCATGACAATACTAGAGACGGCTGTCGAGGCCTCTACGAGTTTGCA
ACGAGAGCTCGTATGTTACCCGTCATGTCCTGCGGCAATCGCACAGATTCGCTGATGTCTGGCACGGGCACAGAT
GGAGTCGCAGTCTCGAGCAGCTGAGATAACTCAAAGTCAAGAGCGAATTGAGGCGGTACGTTGTGGGCCGTGTCG
GACTTTGTGTCCAATGCACTGACTTGGATCTGGTTCAGGGGATGCAAAGGCTGTCAAAGGCTGCGAGTATCCTGA
GCGTCGCGCAAGAGCGTCACTCTGCGATGCTTGAGCGGGCGCAGCAGTCAGCCTTGCAGCTGTCAGACACTTTGC
TATCGGCCTCAGCGTCAGCCGAAAACTTCAGAAACTCGTTATTGGGTGGTTTCGGGTTGGTGAAATGGTGGCCAT
GTTTCGTTTTTCCGGCAATGCTCCTCATTGTCGGGTCGTACGGCCTTCCTCCCTCTGCTGCAAGGAACATCGTTC
TCGTTTGTCTGGGTAAGCGGATGAGCTGGGGCTATTTGGAGACGAAAGAGGGTATGCTGACGACCGACTGCAGGG
GGAGCATTTGGGTTTCTGATGCTCTTGGTGAAGCAGACGAGCACCGGCCTGATGGATGACGCGGTGCTGCTCGCC
AAAGAGACGGGCGCGGCGTATGAGAACGCATCCGCCCACTCTGGCTACGGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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