Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|386
Gene name
Locationscaffold_109:37461..38801
Strand+
Gene length (bp)1340
Transcript length (bp)1083
Coding sequence length (bp)1080
Protein length (aa) 360

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05721 PhyH Phytanoyl-CoA dioxygenase (PhyH) 4.8E-10 72 325

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|386
MSLTILLFFYHITCSFRMPHADGVSAAKDPEPTMAGVVLRVNDGPLKPSEAAPLRVSHPTEAMETLRERYATDGY
VFLKGLLPRQDVLRARAAYFTAVSPSGVLKAGTPAVDGIFDNACSSAADFPGIGAGSIANSRPGSTVAAAVFVDL
ALAAHTAPWYAGSEEEEGFARHPTLADFVARFSGWGERTLGVRRSLLRNNTPGNGAIGVHYDQSFMRHGEPTAVT
AWVPMGDIRLEGGGLIYLEGGDALGQHMEADFNNRAKEAGMSDEEVRSAFNAHMMSSGFLSNGPAEFARQHHKRW
LVSAYEAGDVVLHRPHMIHASTINEDPEGRIRLGTDLRFVDTGRPWDKRWNNHFTFDDGV
Coding >Ophio5|386
ATGTCGTTGACAATCTTGCTCTTCTTCTACCACATCACCTGTTCCTTTAGGATGCCTCACGCAGACGGGGTTTCC
GCAGCCAAAGACCCGGAGCCGACCATGGCCGGTGTCGTCCTCAGGGTTAACGACGGCCCTCTCAAGCCCTCCGAG
GCGGCGCCTCTCCGCGTTTCACATCCGACAGAGGCGATGGAAACGCTCCGAGAGCGGTACGCGACCGACGGCTAC
GTCTTCCTCAAAGGTCTTCTCCCACGTCAAGACGTGCTCCGAGCCCGAGCAGCCTACTTCACAGCCGTATCGCCG
AGCGGCGTTCTCAAAGCCGGAACACCCGCTGTCGACGGCATCTTCGACAACGCCTGCTCCTCAGCAGCCGACTTT
CCGGGCATCGGCGCCGGCAGTATCGCCAATTCGCGGCCGGGCTCCACCGTGGCGGCGGCCGTCTTCGTAGATCTT
GCGTTGGCGGCTCACACGGCGCCCTGGTATGCCGGTTCGGAGGAGGAGGAGGGATTCGCGCGGCATCCGACGCTG
GCTGACTTCGTTGCTCGCTTCTCGGGTTGGGGGGAGAGGACGCTGGGCGTTCGACGCTCGTTGCTGCGGAATAAC
ACGCCTGGGAACGGGGCCATCGGCGTCCATTACGATCAGAGCTTCATGCGCCACGGTGAGCCGACGGCGGTGACC
GCTTGGGTGCCCATGGGGGATATCCGTCTCGAGGGCGGGGGGCTGATTTACCTTGAAGGTGGTGATGCCCTTGGA
CAGCACATGGAAGCCGACTTCAACAACAGGGCAAAGGAAGCCGGGATGAGCGACGAGGAGGTGCGGAGCGCCTTC
AACGCTCATATGATGAGCTCGGGCTTCCTGAGCAACGGACCGGCCGAGTTTGCGAGGCAGCATCATAAGAGGTGG
CTTGTGTCGGCGTACGAGGCTGGAGACGTGGTGCTGCATCGGCCGCACATGATTCACGCGTCGACGATCAACGAG
GATCCAGAGGGAAGGATTCGTCTCGGGACGGATCTGAGGTTTGTGGATACGGGGAGGCCGTGGGATAAGCGGTGG
AATAATCATTTTACGTTTGATGATGGTGTG
Transcript >Ophio5|386
ATGTCGTTGACAATCTTGCTCTTCTTCTACCACATCACCTGTTCCTTTAGGATGCCTCACGCAGACGGGGTTTCC
GCAGCCAAAGACCCGGAGCCGACCATGGCCGGTGTCGTCCTCAGGGTTAACGACGGCCCTCTCAAGCCCTCCGAG
GCGGCGCCTCTCCGCGTTTCACATCCGACAGAGGCGATGGAAACGCTCCGAGAGCGGTACGCGACCGACGGCTAC
GTCTTCCTCAAAGGTCTTCTCCCACGTCAAGACGTGCTCCGAGCCCGAGCAGCCTACTTCACAGCCGTATCGCCG
AGCGGCGTTCTCAAAGCCGGAACACCCGCTGTCGACGGCATCTTCGACAACGCCTGCTCCTCAGCAGCCGACTTT
CCGGGCATCGGCGCCGGCAGTATCGCCAATTCGCGGCCGGGCTCCACCGTGGCGGCGGCCGTCTTCGTAGATCTT
GCGTTGGCGGCTCACACGGCGCCCTGGTATGCCGGTTCGGAGGAGGAGGAGGGATTCGCGCGGCATCCGACGCTG
GCTGACTTCGTTGCTCGCTTCTCGGGTTGGGGGGAGAGGACGCTGGGCGTTCGACGCTCGTTGCTGCGGAATAAC
ACGCCTGGGAACGGGGCCATCGGCGTCCATTACGATCAGAGCTTCATGCGCCACGGTGAGCCGACGGCGGTGACC
GCTTGGGTGCCCATGGGGGATATCCGTCTCGAGGGCGGGGGGCTGATTTACCTTGAAGGTGGTGATGCCCTTGGA
CAGCACATGGAAGCCGACTTCAACAACAGGGCAAAGGAAGCCGGGATGAGCGACGAGGAGGTGCGGAGCGCCTTC
AACGCTCATATGATGAGCTCGGGCTTCCTGAGCAACGGACCGGCCGAGTTTGCGAGGCAGCATCATAAGAGGTGG
CTTGTGTCGGCGTACGAGGCTGGAGACGTGGTGCTGCATCGGCCGCACATGATTCACGCGTCGACGATCAACGAG
GATCCAGAGGGAAGGATTCGTCTCGGGACGGATCTGAGGTTTGTGGATACGGGGAGGCCGTGGGATAAGCGGTGG
AATAATCATTTTACGTTTGATGATGGTGTGTGA
Gene >Ophio5|386
ATGGTGAATCTTACCTTGACCAAGCTCTGAATTGTGCCCCGTGCCTCGTATTGACTCAACCTTTGGACAAACCTC
AAGTCGTTGACAATCTTGCTCTTCTTCTACCACATCACCTGTTCCTTTAGGATGCCTCACGCAGACGGGGTTTCC
GCAGCCAAAGACCCGGAGCCGACCATGGCCGGTGTCGTCCTCAGGGTTAACGACGGCCCTCTCAAGCCCTCCGAG
GCGGCGCCTCTCCGCGTTTCACATCCGACAGAGGCGATGGAAACGCTCCGAGAGCGGTACGCGACCGACGGCTAC
GTCTTCCTCAAAGGTCTTCTCCCACGTCAAGACGTGCTCCGAGCCCGAGCAGCCTACTTCACAGCCGTATCGCCG
AGCGGCGTTCTCAAAGCCGGAACACCCGCTGTCGACGGCATCTTCGACAACGCCTGCTCCTCAGCAGCCGACTTT
CCGGGCATCGGCGCCGGCAGTATCGCCAATTCGCGGCCGGGCTCCACCGTGGCGGCGGCCGTCTTCGTAGATCTT
GCGTTGGCGGCTCACACGGCGCCCTGGTATGCCGGTTCGGAGGAGGAGGAGGGATTCGCGCGGCATCCGACGCTG
GCTGACTTCGTTGCTCGCTTCTCGGGTTGGGGGGAGAGGACGCTGGGCGTTCGACGCTCGTTGCTGCGGAATAAC
ACGCCTGGGAACGGGGCCATCGGCGTCCATTACGATCAGAGCTTCATGCGCCACGGTGAGCCGACGGCGGTGACC
GCTTGGGTGCCCATGGGGGATATCCGTCTCGAGGGCGGGGGGCTGATTTACCTTGAAGGTGGTGAGTATAGTTTT
TTAAAAAAAAAGGTGAGTTGAGTTCTTGGCTTGACGCTTACACAGGTGATGCCCTTGGACAGCACATGGAAGCCG
ACTTCAACAACAGGGCAAAGGAAGCCGGGATGAGCGACGAGGAGGTGCGGAGCGCCTTCAACGCTCATATGATGA
GCTCGGGCTTCCTGAGCAACGGACCGGCCGAGTTTGCGAGGCAGCATCATAAGAGGTGGCTTGTGTCGGCGTACG
AGGCTGGAGACGTGGTGCTGCATCGGCCGCACATGGTGAGAGAAGATTGGGGGTTTTGGTCGAAGTATAAGAGAG
GGAGCATCTTTGCTAATGTTGGTTGGCGCAGATTCACGCGTCGACGATCAACGAGGATCCAGAGGGAAGGATTCG
TCTCGGGACGGATCTGAGGTTTGTGGATACGGGGAGGCCGTGGGATAAGGTGCGTTGAGTCTGACTCCGGAGGGG
GAGATAGCGAGGCTGACGATGAGTAGCGGTGGAATAATCATTTTACGTTTGATGATGGTGTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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