Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3838
Gene name
Locationscaffold_30:6101..6870
Strand+
Gene length (bp)769
Transcript length (bp)696
Coding sequence length (bp)693
Protein length (aa) 231

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08651 DASH_Duo1 DASH complex subunit Duo1 2.2E-27 50 122

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O74372|DUO1_SCHPO DASH complex subunit duo1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=duo1 PE=3 SV=2 51 147 1.0E-12

GO

GO Term Description Terminal node
GO:0072686 mitotic spindle Yes
GO:0042729 DASH complex Yes
GO:0000278 mitotic cell cycle Yes
GO:0007049 cell cycle No
GO:0140513 nuclear protein-containing complex No
GO:0005819 spindle No
GO:0009987 cellular process No
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No
GO:0032991 protein-containing complex No
GO:0043228 non-membrane-bounded organelle No
GO:0043232 intracellular non-membrane-bounded organelle No
GO:0043229 intracellular organelle No
GO:0008150 biological_process No
GO:0043226 organelle No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.2911 0.7021 0.016 0.0206 0.1915 0.0013 0.1821 0.0387 0.0518 0.0013

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup3328
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6457
Ophiocordyceps australis map64 (Brazil) OphauB2|2553
Ophiocordyceps camponoti-floridani Ophcf2|01464
Ophiocordyceps camponoti-rufipedis Ophun1|2714
Ophiocordyceps kimflemingae Ophio5|3838 (this protein)
Ophiocordyceps subramaniannii Hirsu2|6155

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3838
MTDEDSLDDVWASPTQTAPSDARPKTPKTPGTPKTPSADRQPEPIDRDATLQRELESVRGINRSIEAVLATLGRS
SENMEVVSKTVSNASALLNTWTRILSQTEHNQRLILHPSWKGATEDLAEQEAEALERERLAERRAAEEEQKRQEQ
RRWREEDEDKRRLGTSSSSRGTRGFSRIRGASGRGAAGARGGASSAYRPDNTRPGTSSGRGGFSGSSRGSYSGRG
RSRPAR
Coding >Ophio5|3838
ATGACGGACGAGGACAGTCTCGACGACGTATGGGCATCGCCCACGCAGACGGCGCCCTCCGACGCCCGGCCCAAA
ACGCCCAAGACCCCCGGCACTCCCAAGACGCCATCCGCGGACCGGCAGCCTGAGCCAATTGACCGCGATGCGACT
CTTCAAAGGGAGCTAGAGAGCGTCCGAGGCATCAACAGATCCATCGAGGCCGTCCTTGCAACCCTGGGGCGATCC
AGCGAAAACATGGAGGTCGTTTCTAAAACCGTCTCCAACGCCTCCGCCCTGCTCAACACCTGGACCCGAATCCTG
TCCCAGACTGAGCACAACCAAAGACTTATCCTCCACCCGAGCTGGAAAGGCGCGACCGAGGACCTGGCGGAACAA
GAGGCCGAAGCGCTGGAAAGGGAGCGGCTGGCTGAGCGCAGGGCCGCCGAAGAGGAGCAGAAGCGACAGGAGCAG
CGTCGCTGGCGCGAAGAGGACGAGGATAAGAGACGACTGGGCACCTCGTCTTCCTCTCGCGGCACCAGAGGCTTC
TCGAGGATACGAGGGGCGAGCGGTCGCGGCGCAGCCGGTGCCAGAGGCGGCGCGAGCTCGGCTTATCGGCCTGAC
AACACCAGGCCAGGCACGTCGAGCGGACGCGGTGGCTTCTCCGGTAGCAGCCGGGGCTCTTACTCGGGAAGAGGG
CGCTCTAGACCGGCGAGA
Transcript >Ophio5|3838
ATGACGGACGAGGACAGTCTCGACGACGTATGGGCATCGCCCACGCAGACGGCGCCCTCCGACGCCCGGCCCAAA
ACGCCCAAGACCCCCGGCACTCCCAAGACGCCATCCGCGGACCGGCAGCCTGAGCCAATTGACCGCGATGCGACT
CTTCAAAGGGAGCTAGAGAGCGTCCGAGGCATCAACAGATCCATCGAGGCCGTCCTTGCAACCCTGGGGCGATCC
AGCGAAAACATGGAGGTCGTTTCTAAAACCGTCTCCAACGCCTCCGCCCTGCTCAACACCTGGACCCGAATCCTG
TCCCAGACTGAGCACAACCAAAGACTTATCCTCCACCCGAGCTGGAAAGGCGCGACCGAGGACCTGGCGGAACAA
GAGGCCGAAGCGCTGGAAAGGGAGCGGCTGGCTGAGCGCAGGGCCGCCGAAGAGGAGCAGAAGCGACAGGAGCAG
CGTCGCTGGCGCGAAGAGGACGAGGATAAGAGACGACTGGGCACCTCGTCTTCCTCTCGCGGCACCAGAGGCTTC
TCGAGGATACGAGGGGCGAGCGGTCGCGGCGCAGCCGGTGCCAGAGGCGGCGCGAGCTCGGCTTATCGGCCTGAC
AACACCAGGCCAGGCACGTCGAGCGGACGCGGTGGCTTCTCCGGTAGCAGCCGGGGCTCTTACTCGGGAAGAGGG
CGCTCTAGACCGGCGAGATAG
Gene >Ophio5|3838
ATGACGGACGAGGACAGTCTCGACGACGTATGGGCATCGCCCACGCAGACGGCGCCCTCCGACGCCCGGCCCAAA
ACGCCCAAGACCCCCGGCACTCCCAAGACGCCATCCGCGGACCGGCAGCCTGAGCCAATTGACCGCGATGCGACT
CTTCAAAGGGAGCTAGAGAGCGTCCGAGGCATCAACAGATCCATCGAGGCCGTCCTTGCAACCCTGGGGCGATCC
AGCGAAAACATGGAGGTAGGTGATGACCGCCCACAATAGAGAGGCCAAGACAAGGGGCCGGCGGACCCTTACTAA
CCGCTCCCTCAAGGTCGTTTCTAAAACCGTCTCCAACGCCTCCGCCCTGCTCAACACCTGGACCCGAATCCTGTC
CCAGACTGAGCACAACCAAAGACTTATCCTCCACCCGAGCTGGAAAGGCGCGACCGAGGACCTGGCGGAACAAGA
GGCCGAAGCGCTGGAAAGGGAGCGGCTGGCTGAGCGCAGGGCCGCCGAAGAGGAGCAGAAGCGACAGGAGCAGCG
TCGCTGGCGCGAAGAGGACGAGGATAAGAGACGACTGGGCACCTCGTCTTCCTCTCGCGGCACCAGAGGCTTCTC
GAGGATACGAGGGGCGAGCGGTCGCGGCGCAGCCGGTGCCAGAGGCGGCGCGAGCTCGGCTTATCGGCCTGACAA
CACCAGGCCAGGCACGTCGAGCGGACGCGGTGGCTTCTCCGGTAGCAGCCGGGGCTCTTACTCGGGAAGAGGGCG
CTCTAGACCGGCGAGATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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