Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3789
Gene name
Locationscaffold_299:20349..21904
Strand+
Gene length (bp)1555
Transcript length (bp)1074
Coding sequence length (bp)1071
Protein length (aa) 357

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 288 310 22
2 325 347 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3789
MALGNGISRAVARLLAYGDGTWRTEEVDLLQNDQILPDVCYVFVEDRDLYKRLCTEHDRGRILAPFNIPAFLASK
LCTGSNGYFGCRSSFDPAHSLIGLAMWFRCLVKIILDPEECRAPDGNDYWWYEMGFFTSWCHPNSSKVLCVGTTS
SFRDRLGAHLGTAPLLELRDPFAMLIPLFGQIIELYNDSTWRVRNKVRTIEKTRGRHRADFVAMHDVSRHAIHLN
EVYTAAIESIENLLKRQETAYEAMTSLDKTYKLRASSNQERIIAEITLAYHIITSQDSAVMRTIGILTMTFLPAS
FVAALFGTTFFSSAEDKKLTVSTKFWTYWVVAVPSTLLVLLAWRLFLQKSSSRNRWS
Coding >Ophio5|3789
ATGGCGCTTGGCAACGGAATCAGCCGTGCGGTGGCAAGGCTTCTGGCATATGGAGACGGAACCTGGAGGACAGAA
GAAGTCGACCTTCTCCAAAATGATCAAATTTTGCCAGACGTGTGCTACGTCTTCGTGGAGGACCGGGACCTGTAC
AAACGCCTTTGTACGGAACATGACCGCGGAAGGATCCTCGCGCCCTTCAACATACCCGCCTTTCTTGCCAGCAAG
CTCTGCACTGGCAGCAATGGTTACTTTGGCTGCAGAAGCTCGTTCGATCCTGCCCACAGTCTAATAGGCCTCGCC
ATGTGGTTCCGTTGCTTAGTGAAGATCATTCTGGATCCCGAAGAATGTAGAGCGCCGGACGGCAACGACTACTGG
TGGTATGAAATGGGTTTCTTCACCAGTTGGTGCCATCCAAACAGCAGCAAGGTCTTATGCGTCGGCACAACCTCG
AGTTTCCGTGACCGGCTTGGAGCACATCTCGGCACGGCTCCCTTGCTTGAGTTGAGGGACCCCTTTGCTATGCTC
ATTCCGCTCTTCGGCCAAATCATCGAGCTTTACAACGACAGCACCTGGAGAGTACGAAACAAAGTGCGGACAATC
GAAAAGACGAGAGGCAGGCACAGAGCTGATTTTGTGGCGATGCATGACGTCTCCAGGCACGCCATTCATCTCAAT
GAGGTCTACACGGCTGCCATCGAAAGCATAGAAAACTTGCTCAAGCGGCAGGAGACGGCCTACGAGGCCATGACC
TCGCTCGATAAGACATACAAGCTACGTGCGTCATCGAACCAAGAAAGGATCATTGCGGAAATCACACTGGCATAT
CACATCATCACCAGCCAGGACAGCGCCGTCATGAGAACCATAGGCATCCTCACCATGACTTTCTTACCGGCTTCC
TTCGTCGCGGCACTGTTCGGCACCACCTTCTTCTCCTCCGCCGAAGACAAGAAACTGACCGTCTCGACCAAGTTC
TGGACATACTGGGTGGTTGCAGTGCCATCGACCCTGCTCGTTCTCCTTGCTTGGCGGCTGTTTCTGCAGAAATCA
TCTTCTCGAAACCGATGGAGC
Transcript >Ophio5|3789
ATGGCGCTTGGCAACGGAATCAGCCGTGCGGTGGCAAGGCTTCTGGCATATGGAGACGGAACCTGGAGGACAGAA
GAAGTCGACCTTCTCCAAAATGATCAAATTTTGCCAGACGTGTGCTACGTCTTCGTGGAGGACCGGGACCTGTAC
AAACGCCTTTGTACGGAACATGACCGCGGAAGGATCCTCGCGCCCTTCAACATACCCGCCTTTCTTGCCAGCAAG
CTCTGCACTGGCAGCAATGGTTACTTTGGCTGCAGAAGCTCGTTCGATCCTGCCCACAGTCTAATAGGCCTCGCC
ATGTGGTTCCGTTGCTTAGTGAAGATCATTCTGGATCCCGAAGAATGTAGAGCGCCGGACGGCAACGACTACTGG
TGGTATGAAATGGGTTTCTTCACCAGTTGGTGCCATCCAAACAGCAGCAAGGTCTTATGCGTCGGCACAACCTCG
AGTTTCCGTGACCGGCTTGGAGCACATCTCGGCACGGCTCCCTTGCTTGAGTTGAGGGACCCCTTTGCTATGCTC
ATTCCGCTCTTCGGCCAAATCATCGAGCTTTACAACGACAGCACCTGGAGAGTACGAAACAAAGTGCGGACAATC
GAAAAGACGAGAGGCAGGCACAGAGCTGATTTTGTGGCGATGCATGACGTCTCCAGGCACGCCATTCATCTCAAT
GAGGTCTACACGGCTGCCATCGAAAGCATAGAAAACTTGCTCAAGCGGCAGGAGACGGCCTACGAGGCCATGACC
TCGCTCGATAAGACATACAAGCTACGTGCGTCATCGAACCAAGAAAGGATCATTGCGGAAATCACACTGGCATAT
CACATCATCACCAGCCAGGACAGCGCCGTCATGAGAACCATAGGCATCCTCACCATGACTTTCTTACCGGCTTCC
TTCGTCGCGGCACTGTTCGGCACCACCTTCTTCTCCTCCGCCGAAGACAAGAAACTGACCGTCTCGACCAAGTTC
TGGACATACTGGGTGGTTGCAGTGCCATCGACCCTGCTCGTTCTCCTTGCTTGGCGGCTGTTTCTGCAGAAATCA
TCTTCTCGAAACCGATGGAGCTAG
Gene >Ophio5|3789
ATGGCGCTTGGCAACGGAATCAGCCGTGCGGTGGCAAGGCTTCTGGCATATGGTAGCTCCAGCTTGTCGCTTGAC
TGGATCCAAACTTCCCGACTGACTAGTCCCCATAGGAGACGGAACCTGGAGGACAGAAGAAGTCGACCTTCTCCA
AGTGAGCATCGACTGGCGCAGAACTGTTCTGATCCCCTCTCGCCACCAGTGGCCGTGATGCTTACCAACTTAGGA
AGAATGATCAAATTTTGCCAGACGTGTGCTACGTGTATGGCAAACTGCCATCTCCTGTGTGGGACCTCTACCGCT
GATGCTATTTCCCAGCTTCGTGGAGGACCGGGACCTGTACAAACGCCTTTGTACGGAACATGACCGCGGAAGGAT
CCTCGCGCCCTTCAACATACCCGCCTTTCTTGCCAGCAAGCTCTGCACTGGCAGCAATGGTTACTTTGGCTGCAG
AAGCTCGTTCGATCCTGCCCACAGTCTAATAGGCCTCGGTATGCCTTCACTTTCTCCTGCTGCCGCGACTGGCTT
GCATTAATCCGTTTCTTCGCCAGCCATGTGGTTCCGTTGCTTAGTGAAGATCATTCTGGATCCCGAAGAATGTAG
AGCGCCGGACGGCAACGACTACTGGTGGTATGAAATGGGTTTCTTCACCAGTTGGTGCCATCCAAACAGCAGCAA
GGTCTTATGCGTCGGCACAACCTCGAGTTTCCGTGACCGGCTTGGAGCACATCTCGGCACGGCTCCCTTGCTTGA
GTTGAGGGACCCCTTTGCTATGCTCATTCCGCTCTTCGGCCAAATCATCGAGCTTTACAACGACAGCACCTGGAG
AGTACGAAACAAAGTGCGGACAATCGAAAAGGTAGCTGACCAGCCGATTCCCAATCGTGGTGCTCTGATGACTTA
CGTCTCTGCAGACGAGAGGCAGGCACAGAGCTGATTTTGTGGCGATGCATGACGTCTCCAGGCACGCCATTCATC
TCAATGAGGTCTACACGGCTGCCATCGAAAGCATAGAAAACTTGCTCAAGCGGCAGGAGACGGCCTACGAGGCCA
TGACCTCGCTCGATAAGACATACAAGGTGCAGTCACAGGAGTACATGAGCTTCCACCTGCACATGATGAAAGCCT
GAAGCTACGTGCGTCATCGAACCAAGAAAGGATCATTGCGGAAATCACACTGGTACTATGACAGGCCTGAGAGAG
ACGGAGTGCAGTGGGGCGACTGACGAGTGTGGCAGGCATATCACATCATCACCAGCCAGGACAGCGCCGTCATGA
GAACCATAGGCATCCTCACCATGACTTTCTTACCGGCTTCCTTCGTCGCGGTAAGACGGTGCGGGCCGTGTCCCG
TTCTCCCTTGCTCGTGTGGGTGGTTGACGTCAAAGCCTAGGCACTGTTCGGCACCACCTTCTTCTCCTCCGCCGA
AGACAAGAAACTGACCGTCTCGACCAAGTTCTGGACATACTGGGTGGTTGCAGTGCCATCGACCCTGCTCGTTCT
CCTTGCTTGGCGGCTGTTTCTGCAGAAATCATCTTCTCGAAACCGATGGAGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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