Protein ID | Ophio5|3783 |
Gene name | |
Location | scaffold_299:7892..9867 |
Strand | - |
Gene length (bp) | 1975 |
Transcript length (bp) | 1923 |
Coding sequence length (bp) | 1920 |
Protein length (aa) | 640 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10637 | Ofd1_CTDD | Oxoglutarate and iron-dependent oxygenase degradation C-term | 4.6E-88 | 326 | 611 |
PF13661 | 2OG-FeII_Oxy_4 | 2OG-Fe(II) oxygenase superfamily | 9.9E-29 | 151 | 269 |
PF13640 | 2OG-FeII_Oxy_3 | 2OG-Fe(II) oxygenase superfamily | 6.2E-13 | 152 | 269 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q11120|OFD1_SCHPO | Prolyl 3,4-dihydroxylase ofd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ofd1 PE=1 SV=1 | 26 | 601 | 8.0E-132 |
sp|P40032|TPA1_YEAST | Prolyl 3,4-dihydroxylase TPA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPA1 PE=1 SV=1 | 1 | 612 | 3.0E-112 |
sp|Q01F03|OGFD1_OSTTA | Prolyl 3,4-dihydroxylase OGFOD1 OS=Ostreococcus tauri GN=Ogd PE=1 SV=1 | 57 | 601 | 7.0E-68 |
sp|Q5R4R3|OGFD1_PONAB | Prolyl 3-hydroxylase OGFOD1 OS=Pongo abelii GN=OGFOD1 PE=2 SV=1 | 58 | 605 | 3.0E-29 |
sp|Q8N543|OGFD1_HUMAN | Prolyl 3-hydroxylase OGFOD1 OS=Homo sapiens GN=OGFOD1 PE=1 SV=1 | 58 | 605 | 6.0E-28 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q11120|OFD1_SCHPO | Prolyl 3,4-dihydroxylase ofd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ofd1 PE=1 SV=1 | 26 | 601 | 8.0E-132 |
sp|P40032|TPA1_YEAST | Prolyl 3,4-dihydroxylase TPA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPA1 PE=1 SV=1 | 1 | 612 | 3.0E-112 |
sp|Q01F03|OGFD1_OSTTA | Prolyl 3,4-dihydroxylase OGFOD1 OS=Ostreococcus tauri GN=Ogd PE=1 SV=1 | 57 | 601 | 7.0E-68 |
sp|Q5R4R3|OGFD1_PONAB | Prolyl 3-hydroxylase OGFOD1 OS=Pongo abelii GN=OGFOD1 PE=2 SV=1 | 58 | 605 | 3.0E-29 |
sp|Q8N543|OGFD1_HUMAN | Prolyl 3-hydroxylase OGFOD1 OS=Homo sapiens GN=OGFOD1 PE=1 SV=1 | 58 | 605 | 6.0E-28 |
sp|Q3MI03|OGFD1_BOVIN | Prolyl 3-hydroxylase OGFOD1 OS=Bos taurus GN=OGFOD1 PE=2 SV=2 | 2 | 368 | 1.0E-25 |
sp|Q3U0K8|OGFD1_MOUSE | Prolyl 3-hydroxylase OGFOD1 OS=Mus musculus GN=Ogfod1 PE=1 SV=1 | 2 | 368 | 2.0E-24 |
sp|Q6DE73|OGFD1_XENLA | Prolyl 3-hydroxylase OGFOD1 OS=Xenopus laevis GN=ogfod1 PE=2 SV=1 | 56 | 379 | 2.0E-23 |
sp|Q9I7H9|OGFD1_DROME | Prolyl 3-hydroxylase sudestada1 OS=Drosophila melanogaster GN=sud1 PE=2 SV=1 | 56 | 473 | 4.0E-16 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005506 | iron ion binding | Yes |
GO:0031418 | L-ascorbic acid binding | Yes |
GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | Yes |
GO:0019842 | vitamin binding | No |
GO:0043168 | anion binding | No |
GO:0051213 | dioxygenase activity | No |
GO:0016491 | oxidoreductase activity | No |
GO:0031406 | carboxylic acid binding | No |
GO:0046872 | metal ion binding | No |
GO:0043167 | ion binding | No |
GO:0043169 | cation binding | No |
GO:0003674 | molecular_function | No |
GO:0003824 | catalytic activity | No |
GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | No |
GO:0005488 | binding | No |
GO:0030246 | carbohydrate binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0043177 | organic acid binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0036094 | small molecule binding | No |
GO:0046914 | transition metal ion binding | No |
GO:0048029 | monosaccharide binding | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Nucleus | Nuclear localization signal | 0.188 | 0.9475 | 0.1873 | 0.0145 | 0.1557 | 0.0113 | 0.0797 | 0.0119 | 0.0427 | 0.0022 |
Orthofinder run ID | 4 |
Orthogroup | 3511 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|3783 MKRKADSQADGRSQASSKKTKTTKNDAKDKDVRRRFRAGLFEKPVLASYSKEYAASSPYKHAVIHDLVDDALLRS VRDEIRANVQFSPKETDIYKIHQSGDLANLDGLDDESMAKLPSLRALRDAVYSDAFRSYVSAITGCGPLSGRKTD MAINVYTPGCYLLCHDDVIGSRRVSYILYLTDPDKPWRPEWGGALRLFPVQELRGKDGQVAKTPLPEPVKVIPPA WNQLSFFAVQPGESFHDVEEVFHAKPGADDDGGRVRMAISGWFHIPQAGEQGYVEGEEERNAENSSLMQLQGDPA QYDVPCPRPLAVDNPSTNQQGFDEADLEFLLKYMAPTYLTPDTLEQVSDHFSETSSISLANVLSNKFARRLKQYL AAQELLPMPGTSADMETKSPWRVARPPHKHRYLFQQPSGPDQLRTSQEESPITELLDIFLPSRQFRYWLQMATDC VVESCDLTARRFRRGQDYTLATGHDGRPRLELNLGITPTSGWGDDDDNEEAEVQDKGKGKGKGKGKAKAKAKADR DADGDHDVGGHEVYMAGDDGDDADDAAVYKSSGEDDNILFFQAAAWNKMTLVLRDSGTLRFVKYVSSKAPGDRWD VSGVFEVEDEDAAAAPGGESEDEEEFNGFSDPISSESDSD |
Coding | >Ophio5|3783 ATGAAGAGAAAAGCAGACAGTCAGGCTGATGGCCGATCCCAGGCCAGCAGCAAGAAAACAAAGACGACCAAGAAC GACGCCAAAGACAAGGACGTCAGGCGGCGGTTTCGCGCCGGCCTGTTTGAAAAGCCCGTTCTCGCCTCCTACAGC AAAGAGTATGCGGCGTCATCGCCATACAAACATGCCGTCATCCATGACCTCGTTGATGACGCGCTGCTGCGCTCC GTGAGAGACGAGATCCGAGCCAACGTCCAGTTTTCACCCAAGGAGACGGACATCTACAAGATCCACCAGTCCGGA GATCTCGCCAATCTCGACGGCCTCGATGACGAATCCATGGCCAAGCTTCCCTCTCTGCGCGCCCTGCGTGACGCC GTCTACTCCGACGCCTTTAGGAGCTACGTCTCCGCCATCACCGGCTGCGGCCCCCTAAGCGGCCGCAAGACGGAC ATGGCCATCAATGTTTACACCCCCGGATGCTATCTCCTCTGTCACGACGACGTCATTGGGAGCCGCCGTGTTAGC TACATCCTCTACTTGACCGACCCAGACAAGCCGTGGCGGCCCGAGTGGGGGGGCGCCCTCCGCCTGTTCCCCGTC CAGGAGTTACGGGGTAAGGACGGCCAGGTGGCCAAGACGCCTCTCCCTGAACCCGTCAAGGTCATCCCTCCGGCC TGGAACCAGCTCAGCTTCTTCGCTGTTCAGCCCGGCGAGAGCTTCCACGATGTCGAGGAGGTCTTTCACGCCAAG CCCGGCGCAGACGACGATGGCGGCCGTGTCCGAATGGCCATCAGCGGCTGGTTCCACATCCCACAGGCCGGAGAG CAGGGCTATGTCGAGGGCGAGGAGGAGAGAAATGCCGAAAACAGCAGCCTGATGCAGCTTCAGGGCGACCCGGCG CAGTACGACGTCCCCTGTCCTCGGCCCCTCGCCGTCGACAATCCCAGCACCAACCAGCAAGGCTTTGATGAGGCC GACTTGGAGTTTTTGCTCAAGTACATGGCGCCGACCTACCTGACGCCCGACACTCTCGAGCAGGTCTCGGACCAC TTCAGCGAGACCTCTAGCATCTCGCTCGCCAACGTCCTGTCCAACAAGTTTGCGCGCCGCCTCAAGCAGTATCTC GCGGCTCAGGAGTTGCTGCCAATGCCCGGGACCAGCGCCGACATGGAGACGAAGTCGCCGTGGCGGGTGGCGAGG CCGCCGCACAAGCACCGATATCTCTTTCAGCAGCCCAGCGGCCCGGACCAGCTGCGCACATCGCAAGAGGAGTCA CCTATCACTGAGCTTCTCGACATATTTCTGCCGAGTCGTCAGTTCCGATACTGGTTGCAGATGGCCACGGACTGT GTCGTCGAGAGCTGTGACCTCACGGCCCGCCGCTTCCGTCGGGGCCAGGATTATACACTCGCCACCGGCCACGAC GGCAGACCTCGTCTGGAACTCAATCTGGGCATCACCCCGACCTCGGGCTGGGGTGACGATGACGATAATGAAGAG GCCGAAGTGCAAGACAAGGGCAAGGGCAAGGGCAAGGGCAAGGGCAAGGCCAAAGCAAAGGCCAAAGCCGATAGG GACGCGGATGGCGACCACGATGTAGGCGGTCACGAGGTGTACATGGCCGGCGATGACGGCGACGATGCCGACGAC GCTGCCGTCTACAAGTCCAGCGGCGAGGACGACAACATTCTCTTCTTCCAGGCCGCTGCTTGGAACAAGATGACC CTCGTCCTGCGCGACAGCGGCACTCTGCGCTTCGTCAAGTACGTCAGCAGCAAGGCTCCGGGGGACCGGTGGGAC GTCTCTGGCGTGTTCGAAGTCGAGGACGAAGACGCCGCCGCGGCGCCGGGTGGCGAGTCTGAAGACGAGGAGGAG TTTAATGGCTTCTCGGACCCTATTTCCAGCGAAAGCGATAGCGAT |
Transcript | >Ophio5|3783 ATGAAGAGAAAAGCAGACAGTCAGGCTGATGGCCGATCCCAGGCCAGCAGCAAGAAAACAAAGACGACCAAGAAC GACGCCAAAGACAAGGACGTCAGGCGGCGGTTTCGCGCCGGCCTGTTTGAAAAGCCCGTTCTCGCCTCCTACAGC AAAGAGTATGCGGCGTCATCGCCATACAAACATGCCGTCATCCATGACCTCGTTGATGACGCGCTGCTGCGCTCC GTGAGAGACGAGATCCGAGCCAACGTCCAGTTTTCACCCAAGGAGACGGACATCTACAAGATCCACCAGTCCGGA GATCTCGCCAATCTCGACGGCCTCGATGACGAATCCATGGCCAAGCTTCCCTCTCTGCGCGCCCTGCGTGACGCC GTCTACTCCGACGCCTTTAGGAGCTACGTCTCCGCCATCACCGGCTGCGGCCCCCTAAGCGGCCGCAAGACGGAC ATGGCCATCAATGTTTACACCCCCGGATGCTATCTCCTCTGTCACGACGACGTCATTGGGAGCCGCCGTGTTAGC TACATCCTCTACTTGACCGACCCAGACAAGCCGTGGCGGCCCGAGTGGGGGGGCGCCCTCCGCCTGTTCCCCGTC CAGGAGTTACGGGGTAAGGACGGCCAGGTGGCCAAGACGCCTCTCCCTGAACCCGTCAAGGTCATCCCTCCGGCC TGGAACCAGCTCAGCTTCTTCGCTGTTCAGCCCGGCGAGAGCTTCCACGATGTCGAGGAGGTCTTTCACGCCAAG CCCGGCGCAGACGACGATGGCGGCCGTGTCCGAATGGCCATCAGCGGCTGGTTCCACATCCCACAGGCCGGAGAG CAGGGCTATGTCGAGGGCGAGGAGGAGAGAAATGCCGAAAACAGCAGCCTGATGCAGCTTCAGGGCGACCCGGCG CAGTACGACGTCCCCTGTCCTCGGCCCCTCGCCGTCGACAATCCCAGCACCAACCAGCAAGGCTTTGATGAGGCC GACTTGGAGTTTTTGCTCAAGTACATGGCGCCGACCTACCTGACGCCCGACACTCTCGAGCAGGTCTCGGACCAC TTCAGCGAGACCTCTAGCATCTCGCTCGCCAACGTCCTGTCCAACAAGTTTGCGCGCCGCCTCAAGCAGTATCTC GCGGCTCAGGAGTTGCTGCCAATGCCCGGGACCAGCGCCGACATGGAGACGAAGTCGCCGTGGCGGGTGGCGAGG CCGCCGCACAAGCACCGATATCTCTTTCAGCAGCCCAGCGGCCCGGACCAGCTGCGCACATCGCAAGAGGAGTCA CCTATCACTGAGCTTCTCGACATATTTCTGCCGAGTCGTCAGTTCCGATACTGGTTGCAGATGGCCACGGACTGT GTCGTCGAGAGCTGTGACCTCACGGCCCGCCGCTTCCGTCGGGGCCAGGATTATACACTCGCCACCGGCCACGAC GGCAGACCTCGTCTGGAACTCAATCTGGGCATCACCCCGACCTCGGGCTGGGGTGACGATGACGATAATGAAGAG GCCGAAGTGCAAGACAAGGGCAAGGGCAAGGGCAAGGGCAAGGGCAAGGCCAAAGCAAAGGCCAAAGCCGATAGG GACGCGGATGGCGACCACGATGTAGGCGGTCACGAGGTGTACATGGCCGGCGATGACGGCGACGATGCCGACGAC GCTGCCGTCTACAAGTCCAGCGGCGAGGACGACAACATTCTCTTCTTCCAGGCCGCTGCTTGGAACAAGATGACC CTCGTCCTGCGCGACAGCGGCACTCTGCGCTTCGTCAAGTACGTCAGCAGCAAGGCTCCGGGGGACCGGTGGGAC GTCTCTGGCGTGTTCGAAGTCGAGGACGAAGACGCCGCCGCGGCGCCGGGTGGCGAGTCTGAAGACGAGGAGGAG TTTAATGGCTTCTCGGACCCTATTTCCAGCGAAAGCGATAGCGATTGA |
Gene | >Ophio5|3783 ATGAAGAGAAAAGCAGACAGTCAGGCTGATGGCCGATCCCAGGCCAGCAGCAAGAAAACAAAGACGAGTTGCGTT GCTCATGTTGCCCCAATGCCCCATTGATCTGACCGGCTTTCCAGCCAAGAACGACGCCAAAGACAAGGACGTCAG GCGGCGGTTTCGCGCCGGCCTGTTTGAAAAGCCCGTTCTCGCCTCCTACAGCAAAGAGTATGCGGCGTCATCGCC ATACAAACATGCCGTCATCCATGACCTCGTTGATGACGCGCTGCTGCGCTCCGTGAGAGACGAGATCCGAGCCAA CGTCCAGTTTTCACCCAAGGAGACGGACATCTACAAGATCCACCAGTCCGGAGATCTCGCCAATCTCGACGGCCT CGATGACGAATCCATGGCCAAGCTTCCCTCTCTGCGCGCCCTGCGTGACGCCGTCTACTCCGACGCCTTTAGGAG CTACGTCTCCGCCATCACCGGCTGCGGCCCCCTAAGCGGCCGCAAGACGGACATGGCCATCAATGTTTACACCCC CGGATGCTATCTCCTCTGTCACGACGACGTCATTGGGAGCCGCCGTGTTAGCTACATCCTCTACTTGACCGACCC AGACAAGCCGTGGCGGCCCGAGTGGGGGGGCGCCCTCCGCCTGTTCCCCGTCCAGGAGTTACGGGGTAAGGACGG CCAGGTGGCCAAGACGCCTCTCCCTGAACCCGTCAAGGTCATCCCTCCGGCCTGGAACCAGCTCAGCTTCTTCGC TGTTCAGCCCGGCGAGAGCTTCCACGATGTCGAGGAGGTCTTTCACGCCAAGCCCGGCGCAGACGACGATGGCGG CCGTGTCCGAATGGCCATCAGCGGCTGGTTCCACATCCCACAGGCCGGAGAGCAGGGCTATGTCGAGGGCGAGGA GGAGAGAAATGCCGAAAACAGCAGCCTGATGCAGCTTCAGGGCGACCCGGCGCAGTACGACGTCCCCTGTCCTCG GCCCCTCGCCGTCGACAATCCCAGCACCAACCAGCAAGGCTTTGATGAGGCCGACTTGGAGTTTTTGCTCAAGTA CATGGCGCCGACCTACCTGACGCCCGACACTCTCGAGCAGGTCTCGGACCACTTCAGCGAGACCTCTAGCATCTC GCTCGCCAACGTCCTGTCCAACAAGTTTGCGCGCCGCCTCAAGCAGTATCTCGCGGCTCAGGAGTTGCTGCCAAT GCCCGGGACCAGCGCCGACATGGAGACGAAGTCGCCGTGGCGGGTGGCGAGGCCGCCGCACAAGCACCGATATCT CTTTCAGCAGCCCAGCGGCCCGGACCAGCTGCGCACATCGCAAGAGGAGTCACCTATCACTGAGCTTCTCGACAT ATTTCTGCCGAGTCGTCAGTTCCGATACTGGTTGCAGATGGCCACGGACTGTGTCGTCGAGAGCTGTGACCTCAC GGCCCGCCGCTTCCGTCGGGGCCAGGATTATACACTCGCCACCGGCCACGACGGCAGACCTCGTCTGGAACTCAA TCTGGGCATCACCCCGACCTCGGGCTGGGGTGACGATGACGATAATGAAGAGGCCGAAGTGCAAGACAAGGGCAA GGGCAAGGGCAAGGGCAAGGGCAAGGCCAAAGCAAAGGCCAAAGCCGATAGGGACGCGGATGGCGACCACGATGT AGGCGGTCACGAGGTGTACATGGCCGGCGATGACGGCGACGATGCCGACGACGCTGCCGTCTACAAGTCCAGCGG CGAGGACGACAACATTCTCTTCTTCCAGGCCGCTGCTTGGAACAAGATGACCCTCGTCCTGCGCGACAGCGGCAC TCTGCGCTTCGTCAAGTACGTCAGCAGCAAGGCTCCGGGGGACCGGTGGGACGTCTCTGGCGTGTTCGAAGTCGA GGACGAAGACGCCGCCGCGGCGCCGGGTGGCGAGTCTGAAGACGAGGAGGAGTTTAATGGCTTCTCGGACCCTAT TTCCAGCGAAAGCGATAGCGATTGA |