© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|3772 |
| Gene name | |
| Location | scaffold_298:7032..8203 |
| Strand | - |
| Gene length (bp) | 1171 |
| Transcript length (bp) | 957 |
| Coding sequence length (bp) | 954 |
| Protein length (aa) | 318 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03517 | Voldacs | Regulator of volume decrease after cellular swelling | 1.6E-19 | 75 | 178 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|A5DVG6|LOT5_LODEL | Protein LOT5 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=LOT5 PE=3 SV=1 | 7 | 166 | 3.0E-06 |
| sp|Q6BSD9|LOT5_DEBHA | Protein LOT5 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=LOT5 PE=3 SV=1 | 7 | 176 | 7.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 47 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|3772 MRATTTIRSPPFVNDYVSLEQYQAQTPASFAVGRAILHSHIEGATASIPESQRGSLALFPADMAATGQSTLEQKV DLFVNSENLTIFSSAAEVGVSIPYPSISIHAVKQVDGKHVIWMQLELNDGGANDDDFTTVELTIFPASVDSHDPS LQELYEAISACSNLHPNPNDDDSDEEKDHDGIIFDMGAEHEPLDGFIGVLRGTDDGSLPPPVPGSGGWITADNAH EFFDNEGNWIGHGDDDDAELGEGAGRVRLHAELEPTTNGHGSNGVQDNKRAKDGNLEARRYHGQSSGSGQKGVHY FVLFLLSQVKKKMVSAGG |
| Coding | >Ophio5|3772 ATGCGGGCCACGACGACAATCCGCTCACCGCCTTTCGTCAACGACTACGTCTCGCTGGAGCAGTATCAGGCCCAG ACGCCCGCGTCCTTTGCCGTCGGCCGGGCCATTTTGCATTCCCATATCGAGGGCGCTACGGCTTCGATCCCCGAG TCCCAGCGTGGTAGTCTTGCCCTTTTTCCGGCGGACATGGCGGCAACCGGTCAGTCGACTCTGGAGCAAAAGGTC GACTTGTTCGTCAACTCTGAGAACCTGACTATATTTAGCTCCGCGGCCGAAGTCGGCGTCTCGATTCCGTACCCC TCCATCTCGATTCACGCCGTCAAGCAGGTCGACGGCAAGCATGTCATCTGGATGCAGCTCGAGCTCAACGACGGC GGTGCCAATGATGACGATTTCACCACCGTCGAGCTGACCATCTTTCCGGCCAGTGTGGACAGTCATGACCCCTCT CTGCAAGAGCTCTACGAAGCCATCTCGGCCTGCTCCAACCTGCACCCCAACCCCAACGACGATGACTCGGACGAG GAGAAGGATCACGACGGCATTATCTTCGACATGGGCGCTGAACACGAGCCTCTCGACGGCTTCATCGGCGTCTTG CGCGGCACTGACGACGGGAGCCTGCCGCCTCCGGTTCCCGGCAGCGGCGGCTGGATCACTGCGGACAATGCTCAC GAGTTCTTCGACAACGAGGGTAACTGGATCGGCCATGGGGATGATGACGACGCCGAGCTGGGCGAGGGGGCGGGT AGAGTCCGTCTTCACGCCGAGCTCGAGCCGACGACCAACGGCCACGGATCAAACGGAGTGCAGGACAATAAGCGA GCCAAGGACGGAAACCTGGAAGCGCGGAGATACCATGGTCAGTCTTCGGGATCAGGACAGAAAGGCGTCCATTAT TTTGTTTTATTTCTTCTCTCTCAAGTGAAAAAAAAGATGGTGAGTGCTGGTGGG |
| Transcript | >Ophio5|3772 ATGCGGGCCACGACGACAATCCGCTCACCGCCTTTCGTCAACGACTACGTCTCGCTGGAGCAGTATCAGGCCCAG ACGCCCGCGTCCTTTGCCGTCGGCCGGGCCATTTTGCATTCCCATATCGAGGGCGCTACGGCTTCGATCCCCGAG TCCCAGCGTGGTAGTCTTGCCCTTTTTCCGGCGGACATGGCGGCAACCGGTCAGTCGACTCTGGAGCAAAAGGTC GACTTGTTCGTCAACTCTGAGAACCTGACTATATTTAGCTCCGCGGCCGAAGTCGGCGTCTCGATTCCGTACCCC TCCATCTCGATTCACGCCGTCAAGCAGGTCGACGGCAAGCATGTCATCTGGATGCAGCTCGAGCTCAACGACGGC GGTGCCAATGATGACGATTTCACCACCGTCGAGCTGACCATCTTTCCGGCCAGTGTGGACAGTCATGACCCCTCT CTGCAAGAGCTCTACGAAGCCATCTCGGCCTGCTCCAACCTGCACCCCAACCCCAACGACGATGACTCGGACGAG GAGAAGGATCACGACGGCATTATCTTCGACATGGGCGCTGAACACGAGCCTCTCGACGGCTTCATCGGCGTCTTG CGCGGCACTGACGACGGGAGCCTGCCGCCTCCGGTTCCCGGCAGCGGCGGCTGGATCACTGCGGACAATGCTCAC GAGTTCTTCGACAACGAGGGTAACTGGATCGGCCATGGGGATGATGACGACGCCGAGCTGGGCGAGGGGGCGGGT AGAGTCCGTCTTCACGCCGAGCTCGAGCCGACGACCAACGGCCACGGATCAAACGGAGTGCAGGACAATAAGCGA GCCAAGGACGGAAACCTGGAAGCGCGGAGATACCATGGTCAGTCTTCGGGATCAGGACAGAAAGGCGTCCATTAT TTTGTTTTATTTCTTCTCTCTCAAGTGAAAAAAAAGATGGTGAGTGCTGGTGGGTGA |
| Gene | >Ophio5|3772 ATGCGGGCCACGACGACAATCCGCTCACCGCCTTTCGTCAACGACTACGTCTCGCTGGAGCAGTATCAGGCCCAG ACGCCCGCGTCCTTTGCCGTCGGCCGGGCCATTTTGCATTCCCATATCGAGGGCGCTACGGCTTCGATCCCCGAG TCCCAGCGTGGTAGTCTTGCCCTTTTTCCGGCGGACATGGCGGCAACCGGTCAGTCGACTCTGGAGCAAAAGGTC GACTTGTTCGTCAACTCTGAGTAGGTAATGACCGGCAAACAGTCTTGATACGCAGCTGACCATCCTCGTAGGAAC CTGACTATATTTAGCTCCGCGGCCGAAGTCGGCGTCTCGATTCCGTACCCCTCCATCTCGATTCACGCCGTCAAG CAGGTCGACGGCAAGCATGTCATCTGGATGCAGCTCGAGCTCAACGACGGCGGTGCCAATGATGACGATTTCACC ACCGTCGAGCTGACCATCTTTCCGGCCAGTGTGGACAGTCATGACCCCTCTCTGCAAGAGCTCTACGAAGCCATC TCGGCCTGCTCCAACCTGCACCCCAACCCCAACGACGATGACTCGGACGAGGAGAAGGATCACGACGGCATTATC TTCGACATGGGCGCTGAACACGAGCCTCTCGACGGCTTCATCGGCGTCTTGCGCGGCACTGACGACGGGAGCCTG CCGCCTCCGGTTCCCGGCAGCGGCGGCTGGATCACTGCGGACAATGCTCACGAGTTCTTCGACAACGAGGGTAAC TGGATCGGCCATGGGGATGATGACGACGCCGAGCTGGGCGAGGGGGCGGGTAGAGTCCGTCTTCACGCCGAGCTC GAGCCGACGACCAACGGCCACGGATCAAACGGAGTGCAGGACAATAAGCGAGCCAAGGTCGACGAGGACTAGCCA TTCTCCGCAGTGCCCTAGATGCCCAGGACGGGACGAAGCCACTCACTGAGAGCACGGCGTTTAGGACGGAAACCT GGAAGCGCGGAGATACCATGGTCAGTCTTCGGGATCAGGACAGAAAGGCGTCCATTATTTTGTTTTATTTCTTCT CTCTCAAGTGAAAAAAAAGGTTAGACATTGATGATAGATGATGATAACCAAGTTCTACTCTCCAGTTCTCCATGC CGACATGAGCTGAATCGACAAGCAGATGGTGAGTGCTGGTGGGTGA |