Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|377
Gene name
Locationscaffold_109:21727..22229
Strand+
Gene length (bp)502
Transcript length (bp)348
Coding sequence length (bp)348
Protein length (aa) 116

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00071 Ras Ras family 2.5E-06 27 95

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P06781|RHO2_YEAST GTP-binding protein RHO2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RHO2 PE=1 SV=2 9 90 3.0E-06

GO

GO Term Description Terminal node
GO:0005525 GTP binding Yes
GO:0003924 GTPase activity Yes
GO:0032553 ribonucleotide binding No
GO:0043168 anion binding No
GO:0016817 hydrolase activity, acting on acid anhydrides No
GO:0032561 guanyl ribonucleotide binding No
GO:0043167 ion binding No
GO:0003674 molecular_function No
GO:0032555 purine ribonucleotide binding No
GO:0005488 binding No
GO:0016787 hydrolase activity No
GO:0017076 purine nucleotide binding No
GO:1901363 heterocyclic compound binding No
GO:0000166 nucleotide binding No
GO:0016462 pyrophosphatase activity No
GO:0097367 carbohydrate derivative binding No
GO:0097159 organic cyclic compound binding No
GO:0036094 small molecule binding No
GO:0017111 nucleoside-triphosphatase activity No
GO:0003824 catalytic activity No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:1901265 nucleoside phosphate binding No
GO:0019001 guanyl nucleotide binding No
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.4734 0.2808 0.0567 0.4779 0.3373 0.0373 0.2501 0.5068 0.4299 0.0259

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup1052
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5235
Ophiocordyceps australis map64 (Brazil) OphauB2|2899
Ophiocordyceps australis map64 (Brazil) OphauB2|2900
Ophiocordyceps camponoti-floridani Ophcf2|03754
Ophiocordyceps camponoti-rufipedis Ophun1|4106
Ophiocordyceps kimflemingae Ophio5|377 (this protein)
Ophiocordyceps subramaniannii Hirsu2|9928

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|377
MITIVQWWIHARAKGFNNATQIFPPLVHLVGNKRDIRQSCPGGTANCPGGLFHSCCVTVAEATATARSIRADRYV
ECSALTGEGMETVLDESAAEATRRVIARAMAKKNLCRHEG*
Coding >Ophio5|377
ATGATCACCATCGTCCAGTGGTGGATTCATGCTCGAGCTAAAGGATTCAACAACGCAACGCAAATATTCCCTCCG
CTTGTCCACCTCGTTGGAAACAAGAGAGATATCCGCCAGTCATGCCCTGGTGGCACAGCCAACTGTCCCGGCGGA
CTGTTCCACAGCTGCTGTGTGACGGTGGCAGAGGCCACGGCTACAGCCAGAAGTATCCGAGCCGACCGCTACGTC
GAATGTTCTGCCCTCACGGGCGAAGGAATGGAAACGGTGTTGGACGAATCGGCTGCTGAGGCGACTCGCCGCGTC
ATTGCCCGAGCCATGGCAAAGAAGAACTTGTGCCGACACGAAGGTTGA
Transcript >Ophio5|377
ATGATCACCATCGTCCAGTGGTGGATTCATGCTCGAGCTAAAGGATTCAACAACGCAACGCAAATATTCCCTCCG
CTTGTCCACCTCGTTGGAAACAAGAGAGATATCCGCCAGTCATGCCCTGGTGGCACAGCCAACTGTCCCGGCGGA
CTGTTCCACAGCTGCTGTGTGACGGTGGCAGAGGCCACGGCTACAGCCAGAAGTATCCGAGCCGACCGCTACGTC
GAATGTTCTGCCCTCACGGGCGAAGGAATGGAAACGGTGTTGGACGAATCGGCTGCTGAGGCGACTCGCCGCGTC
ATTGCCCGAGCCATGGCAAAGAAGAACTTGTGCCGACACGAAGGTTGA
Gene >Ophio5|377
ATGATCACCATCGTCCAGTGGGTGCGTACTGATCTCCGTTCTTACTCCCGCAGAGCTGAACTGACAGAACGGTCA
AGTGGATTCATGCTCGAGCTAAAGGATTCAACAACGCAACGCAAATATTCCCTCCGCTTGTCCACCTCGTTGGAA
ACAAGAGAGATATCCGCCAGTCATGCCCTGGTGGCACAGCCAACTGTCCCGGCGGACTGTTCCACAGCTGCTGTG
TGACGGTGGCAGAGGTACGTTCCCCCCCCCACCCCCCCCCCCCCCCCCTTACATGCAAATGAAAAACAGGGACGA
AGTCTCAAAAGAGGGCAGCGGCTGATATGGCGTTCAGGCCACGGCTACAGCCAGAAGTATCCGAGCCGACCGCTA
CGTCGAATGTTCTGCCCTCACGGGCGAAGGAATGGAAACGGTGTTGGACGAATCGGCTGCTGAGGCGACTCGCCG
CGTCATTGCCCGAGCCATGGCAAAGAAGAACTTGTGCCGACACGAAGGTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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